RNA–Protein interactions for RNA: ENST00000578502.1

ERBB2-207, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-207ENST00000578502 EYA1Q99502 592 aa14.42□□□□□ -0.1
ERBB2-207ENST00000578502 BCL11BQ9C0K0 894 aaPredicted RBP14.42□□□□□ -0.1
ERBB2-207ENST00000578502 BCL9O00512 1426 aa14.41□□□□□ -0.1
ERBB2-207ENST00000578502 ZCRB1Q8TBF4 217 aaKnown RBP14.41□□□□□ -0.1
ERBB2-207ENST00000578502 RREB1Q92766 1687 aa14.41□□□□□ -0.1
ERBB2-207ENST00000578502 NUP188Q5SRE5 1749 aa14.41□□□□□ -0.1
ERBB2-207ENST00000578502 PROM2Q8N271 834 aa14.4□□□□□ -0.1
ERBB2-207ENST00000578502 NHSQ6T4R5 1651 aa14.39□□□□□ -0.11
ERBB2-207ENST00000578502 TATP17735 454 aaPredicted RBP14.39□□□□□ -0.11
ERBB2-207ENST00000578502 R3HDM1Q15032 1099 aaKnown RBP14.39□□□□□ -0.11
ERBB2-207ENST00000578502 RAPGEF4Q8WZA2 1011 aa14.39□□□□□ -0.11
ERBB2-207ENST00000578502 NCAPD2Q15021 1401 aa14.39□□□□□ -0.11
ERBB2-207ENST00000578502 BTAF1O14981 1849 aa14.38□□□□□ -0.11
ERBB2-207ENST00000578502 DOT1LQ8TEK3 1739 aa14.38□□□□□ -0.11
ERBB2-207ENST00000578502 PLSCR1O15162 318 aa14.36□□□□□ -0.11
ERBB2-207ENST00000578502 CYP27B1O15528 508 aa14.36□□□□□ -0.11
ERBB2-207ENST00000578502 PRIM1P49642 420 aaKnown RBP14.36□□□□□ -0.11
ERBB2-207ENST00000578502 AEBP1Q8IUX7 1158 aa14.36□□□□□ -0.11
ERBB2-207ENST00000578502 PARD3Q8TEW0 1356 aa14.35□□□□□ -0.11
ERBB2-207ENST00000578502 MTHFSP49914 203 aa14.35□□□□□ -0.11
ERBB2-207ENST00000578502 SYTL4Q96C24 671 aaPredicted RBP14.35□□□□□ -0.11
ERBB2-207ENST00000578502 IGSF1Q8N6C5 1336 aa14.35□□□□□ -0.11
ERBB2-207ENST00000578502 PKD1L3Q7Z443 1732 aa14.35□□□□□ -0.11
ERBB2-207ENST00000578502 RGPD3A6NKT7 1758 aaPredicted RBP14.34□□□□□ -0.11
ERBB2-207ENST00000578502 RGPD4Q7Z3J3 1758 aa14.34□□□□□ -0.11
ERBB2-207ENST00000578502 IL13P35225 146 aa14.34□□□□□ -0.11
ERBB2-207ENST00000578502 ANO8Q9HCE9 1232 aaPredicted RBP14.34□□□□□ -0.11
ERBB2-207ENST00000578502 TOGARAM1Q9Y4F4 1720 aa14.33□□□□□ -0.12
ERBB2-207ENST00000578502 TXNRD1Q16881 649 aa14.33□□□□□ -0.12
ERBB2-207ENST00000578502 KCNQ4P56696 695 aa14.32□□□□□ -0.12
ERBB2-207ENST00000578502 PCDH11XQ9BZA7 1347 aa14.32□□□□□ -0.12
ERBB2-207ENST00000578502 PCDH11YQ9BZA8 1340 aa14.32□□□□□ -0.12
ERBB2-207ENST00000578502 NPC1L1Q9UHC9 1359 aa14.32□□□□□ -0.12
ERBB2-207ENST00000578502 SULT6B1Q6IMI4 303 aa14.3□□□□□ -0.12
ERBB2-207ENST00000578502 PDGFDQ9GZP0 370 aaPredicted RBP14.3□□□□□ -0.12
ERBB2-207ENST00000578502 LRRC4BQ9NT99 713 aa14.3□□□□□ -0.12
ERBB2-207ENST00000578502 NBPF14Q5TI25 921 aa14.29□□□□□ -0.12
ERBB2-207ENST00000578502 SPG7Q9UQ90 795 aa14.29□□□□□ -0.12
ERBB2-207ENST00000578502 ITGB4P16144 1822 aa14.29□□□□□ -0.12
ERBB2-207ENST00000578502 COL3A1P02461 1466 aaPredicted RBP14.28□□□□□ -0.12
ERBB2-207ENST00000578502 HMOX1P09601 288 aa14.28□□□□□ -0.12
ERBB2-207ENST00000578502 PHKG2P15735 406 aa14.28□□□□□ -0.12
ERBB2-207ENST00000578502 MPRIPQ6WCQ1 1025 aa14.28□□□□□ -0.12
ERBB2-207ENST00000578502 NKX1-1Q15270 411 aaPredicted RBP14.27□□□□□ -0.13
ERBB2-207ENST00000578502 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.27□□□□□ -0.13
ERBB2-207ENST00000578502 DIAPH1O60610 1272 aaKnown RBP14.26□□□□□ -0.13
ERBB2-207ENST00000578502 PPP2R1AP30153 589 aa14.26□□□□□ -0.13
ERBB2-207ENST00000578502 ZNF827Q17R98 1081 aa14.26□□□□□ -0.13
ERBB2-207ENST00000578502 IFNL2Q8IZJ0 200 aa14.26□□□□□ -0.13
ERBB2-207ENST00000578502 PIGBQ92521 554 aa14.26□□□□□ -0.13
ERBB2-207ENST00000578502 LY75O60449 1722 aa14.26□□□□□ -0.13
ERBB2-207ENST00000578502 PAPPAQ13219 1627 aa14.26□□□□□ -0.13
ERBB2-207ENST00000578502 KDRP35968 1356 aa14.25□□□□□ -0.13
ERBB2-207ENST00000578502 DDX10Q13206 875 aaKnown RBP14.25□□□□□ -0.13
ERBB2-207ENST00000578502 ZNF530Q6P9A1 599 aaPredicted RBP14.25□□□□□ -0.13
ERBB2-207ENST00000578502 SLC15A2Q16348 729 aa14.24□□□□□ -0.13
ERBB2-207ENST00000578502 PLEKHO1Q53GL0 409 aaPredicted RBP14.24□□□□□ -0.13
ERBB2-207ENST00000578502 STK32BQ9NY57 414 aa14.24□□□□□ -0.13
ERBB2-207ENST00000578502 U2SURPO15042 1029 aaKnown RBP14.23□□□□□ -0.13
ERBB2-207ENST00000578502 CASZ1Q86V15 1759 aa14.23□□□□□ -0.13
ERBB2-207ENST00000578502 KDM6AO15550 1401 aaPredicted RBP14.23□□□□□ -0.13
ERBB2-207ENST00000578502 LRP5O75197 1615 aa14.23□□□□□ -0.13
ERBB2-207ENST00000578502 CCNL1Q9UK58 526 aaPredicted RBP14.22□□□□□ -0.13
ERBB2-207ENST00000578502 ZBTB7AO95365 584 aa14.21□□□□□ -0.13
ERBB2-207ENST00000578502 AMOTQ4VCS5 1084 aa14.21□□□□□ -0.13
ERBB2-207ENST00000578502 AKT1S1Q96B36 256 aa14.21□□□□□ -0.13
ERBB2-207ENST00000578502 ASAP1Q9ULH1 1129 aa14.21□□□□□ -0.13
ERBB2-207ENST00000578502 PALLDQ8WX93 1383 aa14.21□□□□□ -0.14
ERBB2-207ENST00000578502 TUBGCP6Q96RT7 1819 aa14.2□□□□□ -0.14
ERBB2-207ENST00000578502 MTHFSDQ2M296 383 aaKnown RBP14.2□□□□□ -0.14
ERBB2-207ENST00000578502 SLC27A3Q5K4L6 730 aa14.2□□□□□ -0.14
ERBB2-207ENST00000578502 TMOD3Q9NYL9 352 aa14.2□□□□□ -0.14
ERBB2-207ENST00000578502 LGR6Q9HBX8 967 aa14.19□□□□□ -0.14
ERBB2-207ENST00000578502 ATG3Q9NT62 314 aa14.19□□□□□ -0.14
ERBB2-207ENST00000578502 ATF5Q9Y2D1 282 aaPredicted RBP14.19□□□□□ -0.14
ERBB2-207ENST00000578502 PLEKHG2Q9H7P9 1386 aa14.19□□□□□ -0.14
ERBB2-207ENST00000578502 C1orf141Q5JVX7 400 aa14.18□□□□□ -0.14
ERBB2-207ENST00000578502 SMIM5Q71RC9 77 aa14.18□□□□□ -0.14
ERBB2-207ENST00000578502 DCAF5Q96JK2 942 aa14.18□□□□□ -0.14
ERBB2-207ENST00000578502 TAF1LQ8IZX4 1826 aa14.18□□□□□ -0.14
ERBB2-207ENST00000578502 C5P01031 1676 aa14.17□□□□□ -0.14
ERBB2-207ENST00000578502 PHACTR3Q96KR7 559 aa14.17□□□□□ -0.14
ERBB2-207ENST00000578502 CFAP53Q96M91 514 aa14.17□□□□□ -0.14
ERBB2-207ENST00000578502 PNPLA7Q6ZV29 1317 aa14.16□□□□□ -0.14
ERBB2-207ENST00000578502 VIRMAQ69YN4 1812 aaKnown RBP14.16□□□□□ -0.14
ERBB2-207ENST00000578502 ERVV-2B6SEH9 535 aa14.16□□□□□ -0.14
ERBB2-207ENST00000578502 HSP90AB1P08238 724 aaKnown RBP14.16□□□□□ -0.14
ERBB2-207ENST00000578502 ZEB1P37275 1124 aaPredicted RBP14.16□□□□□ -0.14
ERBB2-207ENST00000578502 AKAP4Q5JQC9 854 aa14.16□□□□□ -0.14
ERBB2-207ENST00000578502 NFATC2IPQ8NCF5 419 aa14.16□□□□□ -0.14
ERBB2-207ENST00000578502 SLC4A9Q96Q91 983 aa14.16□□□□□ -0.14
ERBB2-207ENST00000578502 SCN11AQ9UI33 1791 aa14.16□□□□□ -0.14
ERBB2-207ENST00000578502 U2AF1L5P0DN76 240 aaPredicted RBP14.15□□□□□ -0.14
ERBB2-207ENST00000578502 PRKAR2BP31323 418 aa14.15□□□□□ -0.14
ERBB2-207ENST00000578502 CABP4P57796 275 aa14.15□□□□□ -0.14
ERBB2-207ENST00000578502 U2AF1Q01081 240 aaKnown RBP eCLIP14.15□□□□□ -0.14
ERBB2-207ENST00000578502 ITPK1Q13572 414 aa14.15□□□□□ -0.14
ERBB2-207ENST00000578502 AMIGO3Q86WK7 504 aa14.15□□□□□ -0.14
ERBB2-207ENST00000578502 SMARCC1Q92922 1105 aaPredicted RBP14.15□□□□□ -0.14
ERBB2-207ENST00000578502 RSPH6AQ9H0K4 717 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms