RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 AMOTQ4VCS5 1084 aa17.59■□□□□ 0.41
SRSF1-202ENST00000578430 USHBP1Q8N6Y0 703 aa17.59■□□□□ 0.41
SRSF1-202ENST00000578430 CARD10Q9BWT7 1032 aa17.59■□□□□ 0.41
SRSF1-202ENST00000578430 RRP7AQ9Y3A4 280 aaKnown RBP17.59■□□□□ 0.41
SRSF1-202ENST00000578430 CALD1Q05682 793 aaKnown RBP17.58■□□□□ 0.4
SRSF1-202ENST00000578430 BTG4Q9NY30 223 aa17.58■□□□□ 0.4
SRSF1-202ENST00000578430 IL16Q14005 1332 aa17.57■□□□□ 0.4
SRSF1-202ENST00000578430 SENP3-EIF4A1A0A087X0R7 540 aa17.57■□□□□ 0.4
SRSF1-202ENST00000578430 HTATSF1O43719 755 aaKnown RBP17.57■□□□□ 0.4
SRSF1-202ENST00000578430 ADAMTS2O95450 1211 aa17.57■□□□□ 0.4
SRSF1-202ENST00000578430 PLEKHO1Q53GL0 409 aaPredicted RBP17.57■□□□□ 0.4
SRSF1-202ENST00000578430 TOM1L2Q6ZVM7 507 aa17.57■□□□□ 0.4
SRSF1-202ENST00000578430 RAPGEF4Q8WZA2 1011 aa17.57■□□□□ 0.4
SRSF1-202ENST00000578430 C8orf37Q96NL8 207 aa17.57■□□□□ 0.4
SRSF1-202ENST00000578430 TRIM35Q9UPQ4 493 aa17.57■□□□□ 0.4
SRSF1-202ENST00000578430 CRB1P82279 1406 aa17.56■□□□□ 0.4
SRSF1-202ENST00000578430 NWD2Q9ULI1 1742 aa17.56■□□□□ 0.4
SRSF1-202ENST00000578430 E9PSI1 815 aa17.56■□□□□ 0.4
SRSF1-202ENST00000578430 RNF39Q9H2S5 420 aa17.56■□□□□ 0.4
SRSF1-202ENST00000578430 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.56■□□□□ 0.47e-24■□□□□ 9.9
SRSF1-202ENST00000578430 PLCH1Q4KWH8 1693 aa17.55■□□□□ 0.4
SRSF1-202ENST00000578430 TATP17735 454 aaPredicted RBP17.55■□□□□ 0.4
SRSF1-202ENST00000578430 MTHFSDQ2M296 383 aaKnown RBP17.55■□□□□ 0.4
SRSF1-202ENST00000578430 STRN4Q9NRL3 753 aa17.55■□□□□ 0.4
SRSF1-202ENST00000578430 SLIT2O94813 1529 aa17.54■□□□□ 0.4
SRSF1-202ENST00000578430 SLFN5Q08AF3 891 aa17.54■□□□□ 0.4
SRSF1-202ENST00000578430 LARP1Q6PKG0 1096 aaKnown RBP17.54■□□□□ 0.4
SRSF1-202ENST00000578430 RGS12O14924 1447 aa17.54■□□□□ 0.4
SRSF1-202ENST00000578430 QTRT2Q9H974 415 aaKnown RBP17.53■□□□□ 0.4
SRSF1-202ENST00000578430 DLG5Q8TDM6 1919 aa17.53■□□□□ 0.4
SRSF1-202ENST00000578430 TRMT2AQ8IZ69 625 aaKnown RBP17.52■□□□□ 0.4
SRSF1-202ENST00000578430 RTF1Q92541 710 aaKnown RBP17.52■□□□□ 0.4
SRSF1-202ENST00000578430 SPG7Q9UQ90 795 aa17.52■□□□□ 0.4
SRSF1-202ENST00000578430 NRAPQ86VF7 1730 aa17.52■□□□□ 0.39
SRSF1-202ENST00000578430 MAP3K5Q99683 1374 aa17.52■□□□□ 0.39
SRSF1-202ENST00000578430 GNAT3A8MTJ3 354 aa17.51■□□□□ 0.39
SRSF1-202ENST00000578430 AKAP4Q5JQC9 854 aa17.51■□□□□ 0.39
SRSF1-202ENST00000578430 CDCA7LQ96GN5 454 aa17.51■□□□□ 0.39
SRSF1-202ENST00000578430 MYH16Q9H6N6 1097 aa17.51■□□□□ 0.39
SRSF1-202ENST00000578430 PARP4Q9UKK3 1724 aaKnown RBP17.5■□□□□ 0.39
SRSF1-202ENST00000578430 OVOS2A0A0G2JMS6 1433 aa17.5■□□□□ 0.39
SRSF1-202ENST00000578430 RBM6P78332 1123 aaKnown RBP17.5■□□□□ 0.39
SRSF1-202ENST00000578430 FNBP4Q8N3X1 1017 aaPredicted RBP17.5■□□□□ 0.39
SRSF1-202ENST00000578430 THRAP3Q9Y2W1 955 aaKnown RBP17.5■□□□□ 0.39
SRSF1-202ENST00000578430 MEGF6O75095 1541 aa17.49■□□□□ 0.39
SRSF1-202ENST00000578430 IL2RBP14784 551 aa17.49■□□□□ 0.39
SRSF1-202ENST00000578430 C1orf141Q5JVX7 400 aa17.49■□□□□ 0.39
SRSF1-202ENST00000578430 DUSP27Q5VZP5 1158 aa17.49■□□□□ 0.39
SRSF1-202ENST00000578430 ZNF530Q6P9A1 599 aaPredicted RBP17.49■□□□□ 0.39
SRSF1-202ENST00000578430 NGLY1Q96IV0 654 aa17.49■□□□□ 0.39
SRSF1-202ENST00000578430 PKD1L3Q7Z443 1732 aa17.48■□□□□ 0.39
SRSF1-202ENST00000578430 UNC5CLQ8IV45 518 aa17.48■□□□□ 0.39
SRSF1-202ENST00000578430 CDCA7Q9BWT1 371 aaPredicted RBP17.48■□□□□ 0.39
SRSF1-202ENST00000578430 GNAI1P63096 354 aa17.47■□□□□ 0.39
SRSF1-202ENST00000578430 IFT57Q9NWB7 429 aa17.47■□□□□ 0.39
SRSF1-202ENST00000578430 SPINK5Q9NQ38 1064 aaPredicted RBP17.46■□□□□ 0.39
SRSF1-202ENST00000578430 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.46■□□□□ 0.39
SRSF1-202ENST00000578430 SPATA31A1Q5TZJ5 1347 aa17.46■□□□□ 0.38
SRSF1-202ENST00000578430 SPATA31A5Q5VU36 1347 aa17.46■□□□□ 0.38
SRSF1-202ENST00000578430 SPATA31A7Q8IWB4 1347 aa17.46■□□□□ 0.38
SRSF1-202ENST00000578430 BCL9LQ86UU0 1499 aa17.45■□□□□ 0.38
SRSF1-202ENST00000578430 HSP90AB1P08238 724 aaKnown RBP17.45■□□□□ 0.38
SRSF1-202ENST00000578430 VPS72Q15906 364 aa17.45■□□□□ 0.38
SRSF1-202ENST00000578430 IFNL2Q8IZJ0 200 aa17.45■□□□□ 0.38
SRSF1-202ENST00000578430 ZCRB1Q8TBF4 217 aaKnown RBP17.45■□□□□ 0.38
SRSF1-202ENST00000578430 CFAP44Q96MT7 982 aa17.45■□□□□ 0.38
SRSF1-202ENST00000578430 BABAM1Q9NWV8 329 aa17.45■□□□□ 0.38
SRSF1-202ENST00000578430 DISP2A7MBM2 1401 aa17.45■□□□□ 0.38
SRSF1-202ENST00000578430 CEMIPQ8WUJ3 1361 aa17.44■□□□□ 0.38
SRSF1-202ENST00000578430 ZNF853P0CG23 659 aa17.44■□□□□ 0.38
SRSF1-202ENST00000578430 MCM10Q7L590 875 aa17.44■□□□□ 0.38
SRSF1-202ENST00000578430 PCDH11XQ9BZA7 1347 aa17.44■□□□□ 0.38
SRSF1-202ENST00000578430 PCDH11YQ9BZA8 1340 aa17.44■□□□□ 0.38
SRSF1-202ENST00000578430 LRRC37A3O60309 1634 aa17.43■□□□□ 0.38
SRSF1-202ENST00000578430 CT47B1P0C2W7 299 aaPredicted RBP17.43■□□□□ 0.38
SRSF1-202ENST00000578430 PHKG2P15735 406 aa17.43■□□□□ 0.38
SRSF1-202ENST00000578430 DCTN1Q14203 1278 aa17.43■□□□□ 0.38
SRSF1-202ENST00000578430 BARGINQ6ZT62 677 aa17.43■□□□□ 0.38
SRSF1-202ENST00000578430 USP21Q9UK80 565 aa17.43■□□□□ 0.38
SRSF1-202ENST00000578430 IL17REQ8NFR9 667 aa17.42■□□□□ 0.38
SRSF1-202ENST00000578430 THUMPD2Q9BTF0 503 aaKnown RBP17.42■□□□□ 0.38
SRSF1-202ENST00000578430 USP35Q9P2H5 1018 aa17.42■□□□□ 0.38
SRSF1-202ENST00000578430 FANCIQ9NVI1 1328 aa17.42■□□□□ 0.38
SRSF1-202ENST00000578430 ADAMTS7Q9UKP4 1686 aa17.42■□□□□ 0.38
SRSF1-202ENST00000578430 CHL1O00533 1208 aa17.41■□□□□ 0.38
SRSF1-202ENST00000578430 WNK3Q9BYP7 1800 aa17.41■□□□□ 0.38
SRSF1-202ENST00000578430 RNMTO43148 476 aaKnown RBP17.4■□□□□ 0.38
SRSF1-202ENST00000578430 DCAF5Q96JK2 942 aa17.4■□□□□ 0.38
SRSF1-202ENST00000578430 TRPC5Q9UL62 973 aaPredicted RBP17.4■□□□□ 0.38
SRSF1-202ENST00000578430 SRCAPQ6ZRS2 3230 aa17.4■□□□□ 0.38
SRSF1-202ENST00000578430 CYP27B1O15528 508 aa17.39■□□□□ 0.37
SRSF1-202ENST00000578430 NKX1-1Q15270 411 aaPredicted RBP17.39■□□□□ 0.37
SRSF1-202ENST00000578430 TAF7Q15545 349 aaPredicted RBP17.39■□□□□ 0.37
SRSF1-202ENST00000578430 RCAN3Q9UKA8 241 aa17.39■□□□□ 0.37
SRSF1-202ENST00000578430 CCDC9Q9Y3X0 531 aaKnown RBP17.39■□□□□ 0.37
SRSF1-202ENST00000578430 LAS1LQ9Y4W2 734 aaKnown RBP17.39■□□□□ 0.37
SRSF1-202ENST00000578430 EP400Q96L91 3159 aa17.39■□□□□ 0.37
SRSF1-202ENST00000578430 EXOC5O00471 708 aa17.38■□□□□ 0.37
SRSF1-202ENST00000578430 TEFQ10587 303 aa17.38■□□□□ 0.37
SRSF1-202ENST00000578430 ATRNO75882 1429 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms