RNA–Protein interactions for RNA: ENST00000578218.5

THRA-208, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 4

Gene THRA, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-208ENST00000578218 CDCA8Q53HL2 280 aa34.86■■■■□ 3.17
THRA-208ENST00000578218 FHDC1Q9C0D6 1143 aaPredicted RBP34.86■■■■□ 3.17
THRA-208ENST00000578218 FYB1O15117 783 aa34.85■■■■□ 3.17
THRA-208ENST00000578218 SLC27A3Q5K4L6 730 aa34.85■■■■□ 3.17
THRA-208ENST00000578218 ZCRB1Q8TBF4 217 aaKnown RBP34.85■■■■□ 3.17
THRA-208ENST00000578218 SGIP1Q9BQI5 828 aa34.83■■■■□ 3.17
THRA-208ENST00000578218 NSD2O96028 1365 aa34.82■■■■□ 3.16
THRA-208ENST00000578218 PRIM1P49642 420 aaKnown RBP34.81■■■■□ 3.16
THRA-208ENST00000578218 USHBP1Q8N6Y0 703 aa34.81■■■■□ 3.16
THRA-208ENST00000578218 SYT17Q9BSW7 474 aa34.8■■■■□ 3.16
THRA-208ENST00000578218 FLT4P35916 1363 aa34.79■■■■□ 3.16
THRA-208ENST00000578218 NBPF6Q5VWK0 638 aa34.79■■■■□ 3.16
THRA-208ENST00000578218 RAPGEF4Q8WZA2 1011 aa34.79■■■■□ 3.16
THRA-208ENST00000578218 NBPF4Q96M43 638 aa34.79■■■■□ 3.16
THRA-208ENST00000578218 ARXQ96QS3 562 aa34.79■■■■□ 3.16
THRA-208ENST00000578218 AKT1S1Q96B36 256 aa34.78■■■■□ 3.16
THRA-208ENST00000578218 CGNL1Q0VF96 1302 aa34.78■■■■□ 3.16
THRA-208ENST00000578218 NSD3Q9BZ95 1437 aa34.77■■■■□ 3.16
THRA-208ENST00000578218 INSRP06213 1382 aa34.76■■■■□ 3.16
THRA-208ENST00000578218 KIF24Q5T7B8 1368 aa34.74■■■■□ 3.15
THRA-208ENST00000578218 TATP17735 454 aaPredicted RBP34.74■■■■□ 3.15
THRA-208ENST00000578218 KCNQ4P56696 695 aa34.74■■■■□ 3.15
THRA-208ENST00000578218 COL24A1Q17RW2 1714 aa34.74■■■■□ 3.15
THRA-208ENST00000578218 ANKRD26Q9UPS8 1709 aa34.73■■■■□ 3.15
THRA-208ENST00000578218 TFCP2L1Q9NZI6 479 aa34.73■■■■□ 3.15
THRA-208ENST00000578218 PNPLA7Q6ZV29 1317 aa34.73■■■■□ 3.15
THRA-208ENST00000578218 MAP3K5Q99683 1374 aa34.73■■■■□ 3.15
THRA-208ENST00000578218 HSP90AB2PQ58FF8 381 aa34.72■■■■□ 3.15
THRA-208ENST00000578218 C5P01031 1676 aa34.71■■■■□ 3.15
THRA-208ENST00000578218 SLC16A10Q8TF71 515 aa34.71■■■■□ 3.15
THRA-208ENST00000578218 CCNL1Q9UK58 526 aaPredicted RBP34.71■■■■□ 3.15
THRA-208ENST00000578218 PCDH11XQ9BZA7 1347 aa34.71■■■■□ 3.15
THRA-208ENST00000578218 PCDH11YQ9BZA8 1340 aa34.71■■■■□ 3.15
THRA-208ENST00000578218 CHD4Q14839 1912 aa34.71■■■■□ 3.15
THRA-208ENST00000578218 PKD1L3Q7Z443 1732 aa34.69■■■■□ 3.14
THRA-208ENST00000578218 POLD1P28340 1107 aa34.69■■■■□ 3.14
THRA-208ENST00000578218 KLHL34Q8N239 644 aa34.68■■■■□ 3.14
THRA-208ENST00000578218 TOGARAM1Q9Y4F4 1720 aa34.67■■■■□ 3.14
THRA-208ENST00000578218 UTRNP46939 3433 aa34.67■■■■□ 3.14
THRA-208ENST00000578218 EMILIN1Q9Y6C2 1016 aa34.65■■■■□ 3.14
THRA-208ENST00000578218 CARD14Q9BXL6 1004 aa34.64■■■■□ 3.14
THRA-208ENST00000578218 ITGB4P16144 1822 aa34.63■■■■□ 3.13
THRA-208ENST00000578218 MAP2P11137 1827 aaKnown RBP34.62■■■■□ 3.13
THRA-208ENST00000578218 TAF1LQ8IZX4 1826 aa34.62■■■■□ 3.13
THRA-208ENST00000578218 TIMELESSQ9UNS1 1208 aa34.61■■■■□ 3.13
THRA-208ENST00000578218 PPM1GO15355 546 aaPredicted RBP34.6■■■■□ 3.13
THRA-208ENST00000578218 MSH5O43196 834 aa34.59■■■■□ 3.13
THRA-208ENST00000578218 PALLDQ8WX93 1383 aa34.58■■■■□ 3.13
THRA-208ENST00000578218 POLR3GLQ9BT43 218 aa34.57■■■■□ 3.12
THRA-208ENST00000578218 NCAPD2Q15021 1401 aa34.56■■■■□ 3.12
THRA-208ENST00000578218 CLSPNQ9HAW4 1339 aa34.55■■■■□ 3.12
THRA-208ENST00000578218 GPR162Q16538 588 aa34.55■■■■□ 3.12
THRA-208ENST00000578218 MPRIPQ6WCQ1 1025 aa34.55■■■■□ 3.12
THRA-208ENST00000578218 CYP27B1O15528 508 aa34.54■■■■□ 3.12
THRA-208ENST00000578218 ZNF784Q8NCA9 323 aaPredicted RBP34.53■■■■□ 3.12
THRA-208ENST00000578218 PCGF6Q9BYE7 350 aa34.53■■■■□ 3.12
THRA-208ENST00000578218 C4BP0C0L5 1744 aa34.52■■■■□ 3.12
THRA-208ENST00000578218 PELP1Q8IZL8 1130 aaKnown RBP34.52■■■■□ 3.12
THRA-208ENST00000578218 COL23A1Q86Y22 540 aaPredicted RBP34.5■■■■□ 3.11
THRA-208ENST00000578218 HMGB2P26583 209 aaKnown RBP34.49■■■■□ 3.11
THRA-208ENST00000578218 WASHC2AQ641Q2 1341 aa34.49■■■■□ 3.11
THRA-208ENST00000578218 SPG7Q9UQ90 795 aa34.48■■■■□ 3.11
THRA-208ENST00000578218 MSL1Q68DK7 614 aa34.47■■■■□ 3.11
THRA-208ENST00000578218 NLGN2Q8NFZ4 835 aa34.46■■■■□ 3.11
THRA-208ENST00000578218 SMARCC1Q92922 1105 aaPredicted RBP34.46■■■■□ 3.11
THRA-208ENST00000578218 UBR3Q6ZT12 1888 aa34.44■■■■□ 3.1
THRA-208ENST00000578218 GOLGB1Q14789 3259 aaKnown RBP34.43■■■■□ 3.1
THRA-208ENST00000578218 AK7Q96M32 723 aa34.43■■■■□ 3.1
THRA-208ENST00000578218 EYA1Q99502 592 aa34.43■■■■□ 3.1
THRA-208ENST00000578218 FLAD1Q8NFF5 587 aa34.42■■■■□ 3.1
THRA-208ENST00000578218 TNNT2P45379 298 aaPredicted RBP34.41■■■■□ 3.1
THRA-208ENST00000578218 POLKQ9UBT6 870 aa34.41■■■■□ 3.1
THRA-208ENST00000578218 NKX1-1Q15270 411 aaPredicted RBP34.39■■■■□ 3.1
THRA-208ENST00000578218 PIGBQ92521 554 aa34.39■■■■□ 3.1
THRA-208ENST00000578218 TMOD3Q9NYL9 352 aa34.37■■■■□ 3.09
THRA-208ENST00000578218 EIF4G2P78344 907 aaKnown RBP eCLIP34.36■■■■□ 3.09
THRA-208ENST00000578218 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.36■■■■□ 3.09
THRA-208ENST00000578218 EIF4A2Q14240 407 aaKnown RBP34.35■■■■□ 3.09
THRA-208ENST00000578218 PHF14O94880 888 aa34.34■■■■□ 3.09
THRA-208ENST00000578218 IFNL2Q8IZJ0 200 aa34.34■■■■□ 3.09
THRA-208ENST00000578218 PHKG2P15735 406 aa34.33■■■■□ 3.09
THRA-208ENST00000578218 HSPA5P11021 654 aaKnown RBP34.32■■■■□ 3.08
THRA-208ENST00000578218 PLEKHG2Q9H7P9 1386 aa34.32■■■■□ 3.08
THRA-208ENST00000578218 LOC102724428A0A0B4J2F2 783 aa34.31■■■■□ 3.08
THRA-208ENST00000578218 SIK1P57059 783 aa34.31■■■■□ 3.08
THRA-208ENST00000578218 YBX3P16989 372 aaKnown RBP eCLIP34.28■■■■□ 3.08
THRA-208ENST00000578218 AMIGO3Q86WK7 504 aa34.28■■■■□ 3.08
THRA-208ENST00000578218 LINC00116Q8NCU8 138 aa34.28■■■■□ 3.08
THRA-208ENST00000578218 PANK3Q9H999 370 aa34.28■■■■□ 3.08
THRA-208ENST00000578218 IGSF1Q8N6C5 1336 aa34.28■■■■□ 3.08
THRA-208ENST00000578218 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.27■■■■□ 3.08
THRA-208ENST00000578218 GRIN3BO60391 1043 aa34.27■■■■□ 3.08
THRA-208ENST00000578218 SSFA2P28290 1259 aa34.26■■■■□ 3.08
THRA-208ENST00000578218 ASAP1Q9ULH1 1129 aa34.26■■■■□ 3.08
THRA-208ENST00000578218 CD2APQ9Y5K6 639 aa34.26■■■■□ 3.08
THRA-208ENST00000578218 ATP6V1AP38606 617 aa34.23■■■■□ 3.07
THRA-208ENST00000578218 SMIM5Q71RC9 77 aa34.23■■■■□ 3.07
THRA-208ENST00000578218 GNPATO15228 680 aa34.22■■■■□ 3.07
THRA-208ENST00000578218 ITPK1Q13572 414 aa34.21■■■■□ 3.07
THRA-208ENST00000578218 CCER1Q8TC90 406 aaPredicted RBP34.21■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms