RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 SLIT3O75094 1523 aa11.93□□□□□ -0.5
SLC46A1-201ENST00000578217 NLRP13Q86W25 1043 aa11.93□□□□□ -0.5
SLC46A1-201ENST00000578217 KDM2AQ9Y2K7 1162 aa11.93□□□□□ -0.5
SLC46A1-201ENST00000578217 CCDC61Q9Y6R9 512 aa11.93□□□□□ -0.5
SLC46A1-201ENST00000578217 ADCY9O60503 1353 aa11.92□□□□□ -0.5
SLC46A1-201ENST00000578217 ZBTB47Q9UFB7 747 aaPredicted RBP11.92□□□□□ -0.5
SLC46A1-201ENST00000578217 PCNTO95613 3336 aa11.91□□□□□ -0.5
SLC46A1-201ENST00000578217 PIK3C2AO00443 1686 aa11.91□□□□□ -0.5
SLC46A1-201ENST00000578217 POTEIP0CG38 1075 aa11.9□□□□□ -0.5
SLC46A1-201ENST00000578217 USP6P35125 1406 aa11.9□□□□□ -0.5
SLC46A1-201ENST00000578217 NLRP6P59044 892 aa11.9□□□□□ -0.5
SLC46A1-201ENST00000578217 TNS2Q63HR2 1409 aa11.9□□□□□ -0.5
SLC46A1-201ENST00000578217 DNAJC5GQ8N7S2 189 aa11.9□□□□□ -0.5
SLC46A1-201ENST00000578217 CARD10Q9BWT7 1032 aa11.9□□□□□ -0.5
SLC46A1-201ENST00000578217 GPBP1L1Q9HC44 474 aaPredicted RBP11.9□□□□□ -0.5
SLC46A1-201ENST00000578217 QSER1Q2KHR3 1735 aa11.89□□□□□ -0.51
SLC46A1-201ENST00000578217 CPSF1Q10570 1443 aaKnown RBP11.89□□□□□ -0.51
SLC46A1-201ENST00000578217 EXOC5O00471 708 aa11.89□□□□□ -0.51
SLC46A1-201ENST00000578217 COL13A1Q5TAT6 717 aaPredicted RBP11.89□□□□□ -0.51
SLC46A1-201ENST00000578217 PPIP5K1Q6PFW1 1433 aa11.88□□□□□ -0.51
SLC46A1-201ENST00000578217 KIF3CO14782 793 aa11.88□□□□□ -0.51
SLC46A1-201ENST00000578217 NUBP1P53384 320 aa11.88□□□□□ -0.51
SLC46A1-201ENST00000578217 ARHGEF25Q86VW2 580 aa11.88□□□□□ -0.51
SLC46A1-201ENST00000578217 DCAF11Q8TEB1 546 aa11.88□□□□□ -0.51
SLC46A1-201ENST00000578217 CDCA7Q9BWT1 371 aaPredicted RBP11.88□□□□□ -0.51
SLC46A1-201ENST00000578217 TRPM1Q7Z4N2 1603 aa11.88□□□□□ -0.51
SLC46A1-201ENST00000578217 SOX12O15370 315 aa11.87□□□□□ -0.51
SLC46A1-201ENST00000578217 GRIN3BO60391 1043 aa11.87□□□□□ -0.51
SLC46A1-201ENST00000578217 POLD1P28340 1107 aa11.87□□□□□ -0.51
SLC46A1-201ENST00000578217 CABP2Q9NPB3 220 aa11.87□□□□□ -0.51
SLC46A1-201ENST00000578217 ABCC6O95255 1503 aa11.86□□□□□ -0.51
SLC46A1-201ENST00000578217 MSL1Q68DK7 614 aa11.86□□□□□ -0.51
SLC46A1-201ENST00000578217 SLC16A10Q8TF71 515 aa11.86□□□□□ -0.51
SLC46A1-201ENST00000578217 WWC3Q9ULE0 1092 aa11.86□□□□□ -0.51
SLC46A1-201ENST00000578217 BRD4O60885 1362 aaPredicted RBP11.86□□□□□ -0.51
SLC46A1-201ENST00000578217 CSB-PGBD3P0DP91 1061 aa11.85□□□□□ -0.51
SLC46A1-201ENST00000578217 HTRA3P83110 453 aa11.84□□□□□ -0.51
SLC46A1-201ENST00000578217 TFCP2L1Q9NZI6 479 aa11.84□□□□□ -0.51
SLC46A1-201ENST00000578217 CABP1Q9NZU7 370 aa11.84□□□□□ -0.51
SLC46A1-201ENST00000578217 NFAT5O94916 1531 aa11.84□□□□□ -0.51
SLC46A1-201ENST00000578217 COL23A1Q86Y22 540 aaPredicted RBP11.83□□□□□ -0.52
SLC46A1-201ENST00000578217 SPOCK2Q92563 424 aa11.83□□□□□ -0.52
SLC46A1-201ENST00000578217 SRPK2P78362 688 aaKnown RBP11.82□□□□□ -0.52
SLC46A1-201ENST00000578217 RASEFQ8IZ41 740 aa11.82□□□□□ -0.52
SLC46A1-201ENST00000578217 CCDC7Q96M83 1385 aa11.81□□□□□ -0.52
SLC46A1-201ENST00000578217 NBPF1Q3BBV0 1214 aa11.81□□□□□ -0.52
SLC46A1-201ENST00000578217 NSD2O96028 1365 aa11.8□□□□□ -0.52
SLC46A1-201ENST00000578217 APLP1P51693 650 aa11.8□□□□□ -0.52
SLC46A1-201ENST00000578217 SLC27A3Q5K4L6 730 aa11.79□□□□□ -0.52
SLC46A1-201ENST00000578217 NLRP2Q9NX02 1062 aa11.79□□□□□ -0.52
SLC46A1-201ENST00000578217 LY75O60449 1722 aa11.79□□□□□ -0.52
SLC46A1-201ENST00000578217 TTC21BQ7Z4L5 1316 aa11.79□□□□□ -0.52
SLC46A1-201ENST00000578217 CD44P16070 742 aaKnown RBP11.78□□□□□ -0.52
SLC46A1-201ENST00000578217 SMIM5Q71RC9 77 aa11.78□□□□□ -0.52
SLC46A1-201ENST00000578217 AMIGO3Q86WK7 504 aa11.78□□□□□ -0.52
SLC46A1-201ENST00000578217 ERBB3P21860 1342 aa11.78□□□□□ -0.52
SLC46A1-201ENST00000578217 QRICH2Q9H0J4 1663 aa11.78□□□□□ -0.52
SLC46A1-201ENST00000578217 IL2RBP14784 551 aa11.77□□□□□ -0.53
SLC46A1-201ENST00000578217 PRIM1P49642 420 aaKnown RBP11.77□□□□□ -0.53
SLC46A1-201ENST00000578217 PRELPP51888 382 aa11.77□□□□□ -0.53
SLC46A1-201ENST00000578217 WDR90Q96KV7 1748 aa11.77□□□□□ -0.53
SLC46A1-201ENST00000578217 TNS4Q8IZW8 715 aa11.76□□□□□ -0.53
SLC46A1-201ENST00000578217 DDX54Q8TDD1 881 aaKnown RBP11.76□□□□□ -0.53
SLC46A1-201ENST00000578217 NMRK2Q9NPI5 230 aa11.76□□□□□ -0.53
SLC46A1-201ENST00000578217 CD2APQ9Y5K6 639 aa11.76□□□□□ -0.53
SLC46A1-201ENST00000578217 DOT1LQ8TEK3 1739 aa11.76□□□□□ -0.53
SLC46A1-201ENST00000578217 JMYQ8N9B5 988 aa11.75□□□□□ -0.53
SLC46A1-201ENST00000578217 IGSF1Q8N6C5 1336 aa11.75□□□□□ -0.53
SLC46A1-201ENST00000578217 KCNH5Q8NCM2 988 aa11.74□□□□□ -0.53
SLC46A1-201ENST00000578217 SYTL4Q96C24 671 aaPredicted RBP11.74□□□□□ -0.53
SLC46A1-201ENST00000578217 CCNL1Q9UK58 526 aaPredicted RBP11.74□□□□□ -0.53
SLC46A1-201ENST00000578217 CENPJQ9HC77 1338 aaPredicted RBP11.74□□□□□ -0.53
SLC46A1-201ENST00000578217 ANKRD24Q8TF21 1146 aa11.73□□□□□ -0.53
SLC46A1-201ENST00000578217 KLRG1Q96E93 195 aa11.73□□□□□ -0.53
SLC46A1-201ENST00000578217 LTN1O94822 1766 aa11.72□□□□□ -0.53
SLC46A1-201ENST00000578217 TOGARAM1Q9Y4F4 1720 aa11.72□□□□□ -0.53
SLC46A1-201ENST00000578217 TOMM70O94826 608 aa11.72□□□□□ -0.53
SLC46A1-201ENST00000578217 TSPYL2Q9H2G4 693 aaPredicted RBP11.72□□□□□ -0.53
SLC46A1-201ENST00000578217 CICQ96RK0 1608 aaPredicted RBP11.71□□□□□ -0.53
SLC46A1-201ENST00000578217 ANKRD36BQ8N2N9 1353 aa11.71□□□□□ -0.53
SLC46A1-201ENST00000578217 KIAA1210Q9ULL0 1709 aa11.71□□□□□ -0.54
SLC46A1-201ENST00000578217 USP54Q70EL1 1684 aa11.71□□□□□ -0.54
SLC46A1-201ENST00000578217 RAB3GAP2Q9H2M9 1393 aa11.7□□□□□ -0.54
SLC46A1-201ENST00000578217 SLC34A2O95436 690 aa11.7□□□□□ -0.54
SLC46A1-201ENST00000578217 NME9Q86XW9 330 aa11.7□□□□□ -0.54
SLC46A1-201ENST00000578217 C5P01031 1676 aa11.7□□□□□ -0.54
SLC46A1-201ENST00000578217 TAF1LQ8IZX4 1826 aa11.7□□□□□ -0.54
SLC46A1-201ENST00000578217 FAM212AQ96EL1 285 aa11.69□□□□□ -0.54
SLC46A1-201ENST00000578217 STAC3Q96MF2 364 aa11.69□□□□□ -0.54
SLC46A1-201ENST00000578217 KIAA1551Q9HCM1 1747 aa11.69□□□□□ -0.54
SLC46A1-201ENST00000578217 TTC21AQ8NDW8 1320 aa11.68□□□□□ -0.54
SLC46A1-201ENST00000578217 DCAF8Q5TAQ9 597 aa11.68□□□□□ -0.54
SLC46A1-201ENST00000578217 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.68□□□□□ -0.54
SLC46A1-201ENST00000578217 RGPD2P0DJD1 1756 aa11.68□□□□□ -0.54
SLC46A1-201ENST00000578217 FAM208AQ9UK61 1670 aaKnown RBP11.68□□□□□ -0.54
SLC46A1-201ENST00000578217 MEGF6O75095 1541 aa11.67□□□□□ -0.54
SLC46A1-201ENST00000578217 LTV1Q96GA3 475 aaPredicted RBP11.67□□□□□ -0.54
SLC46A1-201ENST00000578217 USP31Q70CQ4 1352 aa11.67□□□□□ -0.54
SLC46A1-201ENST00000578217 KTN1Q86UP2 1357 aaKnown RBP11.67□□□□□ -0.54
SLC46A1-201ENST00000578217 MON2Q7Z3U7 1717 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms