RNA–Protein interactions for RNA: ENST00000578150.1

TTC39C-205, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 499 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-205ENST00000578150 HSP90AB2PQ58FF8 381 aa26.85■■□□□ 1.89
TTC39C-205ENST00000578150 RAPGEF4Q8WZA2 1011 aa26.84■■□□□ 1.89
TTC39C-205ENST00000578150 SHANK3Q9BYB0 1731 aa26.82■■□□□ 1.88
TTC39C-205ENST00000578150 PAPPAQ13219 1627 aa26.81■■□□□ 1.88
TTC39C-205ENST00000578150 SLC27A3Q5K4L6 730 aa26.8■■□□□ 1.88
TTC39C-205ENST00000578150 USHBP1Q8N6Y0 703 aa26.8■■□□□ 1.88
TTC39C-205ENST00000578150 PDGFDQ9GZP0 370 aaPredicted RBP26.8■■□□□ 1.88
TTC39C-205ENST00000578150 TATP17735 454 aaPredicted RBP26.79■■□□□ 1.88
TTC39C-205ENST00000578150 PRIM1P49642 420 aaKnown RBP26.79■■□□□ 1.88
TTC39C-205ENST00000578150 HSPA5P11021 654 aaKnown RBP26.78■■□□□ 1.88
TTC39C-205ENST00000578150 SYTL4Q96C24 671 aaPredicted RBP26.78■■□□□ 1.88
TTC39C-205ENST00000578150 EMILIN1Q9Y6C2 1016 aa26.78■■□□□ 1.88
TTC39C-205ENST00000578150 DOT1LQ8TEK3 1739 aa26.78■■□□□ 1.88
TTC39C-205ENST00000578150 ANKRD26Q9UPS8 1709 aa26.77■■□□□ 1.88
TTC39C-205ENST00000578150 ZBTB7AO95365 584 aa26.77■■□□□ 1.88
TTC39C-205ENST00000578150 POLR3GLQ9BT43 218 aa26.77■■□□□ 1.88
TTC39C-205ENST00000578150 LRRC4BQ9NT99 713 aa26.76■■□□□ 1.87
TTC39C-205ENST00000578150 PCDH11XQ9BZA7 1347 aa26.75■■□□□ 1.87
TTC39C-205ENST00000578150 PCDH11YQ9BZA8 1340 aa26.75■■□□□ 1.87
TTC39C-205ENST00000578150 MTFR1LQ9H019 292 aa26.75■■□□□ 1.87
TTC39C-205ENST00000578150 NSD2O96028 1365 aa26.74■■□□□ 1.87
TTC39C-205ENST00000578150 WASHC2AQ641Q2 1341 aa26.74■■□□□ 1.87
TTC39C-205ENST00000578150 PPM1GO15355 546 aaPredicted RBP26.73■■□□□ 1.87
TTC39C-205ENST00000578150 PTGER2P43116 358 aa26.73■■□□□ 1.87
TTC39C-205ENST00000578150 NCAPD2Q15021 1401 aa26.73■■□□□ 1.87
TTC39C-205ENST00000578150 ATF5Q9Y2D1 282 aaPredicted RBP26.72■■□□□ 1.87
TTC39C-205ENST00000578150 ZNF827Q17R98 1081 aa26.71■■□□□ 1.87
TTC39C-205ENST00000578150 AKT1S1Q96B36 256 aa26.71■■□□□ 1.87
TTC39C-205ENST00000578150 MAP2P11137 1827 aaKnown RBP26.71■■□□□ 1.87
TTC39C-205ENST00000578150 POLKQ9UBT6 870 aa26.7■■□□□ 1.86
TTC39C-205ENST00000578150 LY75O60449 1722 aa26.7■■□□□ 1.86
TTC39C-205ENST00000578150 DCAF8L1A6NGE4 600 aa26.69■■□□□ 1.86
TTC39C-205ENST00000578150 PANK3Q9H999 370 aa26.68■■□□□ 1.86
TTC39C-205ENST00000578150 QSER1Q2KHR3 1735 aa26.67■■□□□ 1.86
TTC39C-205ENST00000578150 PKD1L3Q7Z443 1732 aa26.66■■□□□ 1.86
TTC39C-205ENST00000578150 SGIP1Q9BQI5 828 aa26.66■■□□□ 1.86
TTC39C-205ENST00000578150 CYP27B1O15528 508 aa26.65■■□□□ 1.86
TTC39C-205ENST00000578150 HMGB2P26583 209 aaKnown RBP26.65■■□□□ 1.86
TTC39C-205ENST00000578150 SLC16A10Q8TF71 515 aa26.65■■□□□ 1.86
TTC39C-205ENST00000578150 EYA1Q99502 592 aa26.65■■□□□ 1.86
TTC39C-205ENST00000578150 CCNL1Q9UK58 526 aaPredicted RBP26.65■■□□□ 1.86
TTC39C-205ENST00000578150 SPG7Q9UQ90 795 aa26.64■■□□□ 1.86
TTC39C-205ENST00000578150 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.63■■□□□ 1.85
TTC39C-205ENST00000578150 TFCP2L1Q9NZI6 479 aa26.63■■□□□ 1.85
TTC39C-205ENST00000578150 TNNT2P45379 298 aaPredicted RBP26.62■■□□□ 1.85
TTC39C-205ENST00000578150 PLEKHG2Q9H7P9 1386 aa26.61■■□□□ 1.85
TTC39C-205ENST00000578150 KCNQ4P56696 695 aa26.61■■□□□ 1.85
TTC39C-205ENST00000578150 NKX1-1Q15270 411 aaPredicted RBP26.61■■□□□ 1.85
TTC39C-205ENST00000578150 PNPLA7Q6ZV29 1317 aa26.61■■□□□ 1.85
TTC39C-205ENST00000578150 ARXQ96QS3 562 aa26.6■■□□□ 1.85
TTC39C-205ENST00000578150 FHDC1Q9C0D6 1143 aaPredicted RBP26.6■■□□□ 1.85
TTC39C-205ENST00000578150 EIF4A2Q14240 407 aaKnown RBP26.59■■□□□ 1.85
TTC39C-205ENST00000578150 MPRIPQ6WCQ1 1025 aa26.58■■□□□ 1.85
TTC39C-205ENST00000578150 SYT17Q9BSW7 474 aa26.58■■□□□ 1.85
TTC39C-205ENST00000578150 SMARCC1Q92922 1105 aaPredicted RBP26.57■■□□□ 1.84
TTC39C-205ENST00000578150 PALLDQ8WX93 1383 aa26.57■■□□□ 1.84
TTC39C-205ENST00000578150 MAP3K5Q99683 1374 aa26.57■■□□□ 1.84
TTC39C-205ENST00000578150 TOGARAM1Q9Y4F4 1720 aa26.56■■□□□ 1.84
TTC39C-205ENST00000578150 TUBGCP6Q96RT7 1819 aa26.56■■□□□ 1.84
TTC39C-205ENST00000578150 POLD1P28340 1107 aa26.55■■□□□ 1.84
TTC39C-205ENST00000578150 KNSTRNQ9Y448 316 aa26.55■■□□□ 1.84
TTC39C-205ENST00000578150 ITGB4P16144 1822 aa26.55■■□□□ 1.84
TTC39C-205ENST00000578150 MORC1Q86VD1 984 aa26.54■■□□□ 1.84
TTC39C-205ENST00000578150 IFNL2Q8IZJ0 200 aa26.54■■□□□ 1.84
TTC39C-205ENST00000578150 IGSF1Q8N6C5 1336 aa26.54■■□□□ 1.84
TTC39C-205ENST00000578150 COL24A1Q17RW2 1714 aa26.53■■□□□ 1.84
TTC39C-205ENST00000578150 YY1P25490 414 aa26.53■■□□□ 1.84
TTC39C-205ENST00000578150 C5P01031 1676 aa26.52■■□□□ 1.84
TTC39C-205ENST00000578150 PHKG2P15735 406 aa26.51■■□□□ 1.83
TTC39C-205ENST00000578150 PIGBQ92521 554 aa26.51■■□□□ 1.83
TTC39C-205ENST00000578150 KIF7Q2M1P5 1343 aa26.49■■□□□ 1.83
TTC39C-205ENST00000578150 COL23A1Q86Y22 540 aaPredicted RBP26.48■■□□□ 1.83
TTC39C-205ENST00000578150 FLAD1Q8NFF5 587 aa26.48■■□□□ 1.83
TTC39C-205ENST00000578150 TMOD3Q9NYL9 352 aa26.48■■□□□ 1.83
TTC39C-205ENST00000578150 TAF1LQ8IZX4 1826 aa26.48■■□□□ 1.83
TTC39C-205ENST00000578150 MSH5O43196 834 aa26.46■■□□□ 1.83
TTC39C-205ENST00000578150 AMER1Q5JTC6 1135 aaPredicted RBP26.45■■□□□ 1.82
TTC39C-205ENST00000578150 HSP90AB1P08238 724 aaKnown RBP26.44■■□□□ 1.82
TTC39C-205ENST00000578150 AMOTQ4VCS5 1084 aa26.44■■□□□ 1.82
TTC39C-205ENST00000578150 PLEKHO1Q53GL0 409 aaPredicted RBP26.44■■□□□ 1.82
TTC39C-205ENST00000578150 C4BP0C0L5 1744 aa26.43■■□□□ 1.82
TTC39C-205ENST00000578150 LOC102724428A0A0B4J2F2 783 aa26.43■■□□□ 1.82
TTC39C-205ENST00000578150 SIK1P57059 783 aa26.43■■□□□ 1.82
TTC39C-205ENST00000578150 AK7Q96M32 723 aa26.42■■□□□ 1.82
TTC39C-205ENST00000578150 ERVV-2B6SEH9 535 aa26.41■■□□□ 1.82
TTC39C-205ENST00000578150 DCAF5Q96JK2 942 aa26.41■■□□□ 1.82
TTC39C-205ENST00000578150 ASAP1Q9ULH1 1129 aa26.4■■□□□ 1.82
TTC39C-205ENST00000578150 KLHL34Q8N239 644 aa26.39■■□□□ 1.82
TTC39C-205ENST00000578150 KDRP35968 1356 aa26.38■■□□□ 1.81
TTC39C-205ENST00000578150 ZNF530Q6P9A1 599 aaPredicted RBP26.38■■□□□ 1.81
TTC39C-205ENST00000578150 PER1O15534 1290 aaPredicted RBP26.37■■□□□ 1.81
TTC39C-205ENST00000578150 IL13P35225 146 aa26.37■■□□□ 1.81
TTC39C-205ENST00000578150 ATG3Q9NT62 314 aa26.37■■□□□ 1.81
TTC39C-205ENST00000578150 SULT6B1Q6IMI4 303 aa26.36■■□□□ 1.81
TTC39C-205ENST00000578150 AEBP1Q8IUX7 1158 aa26.36■■□□□ 1.81
TTC39C-205ENST00000578150 SSFA2P28290 1259 aa26.35■■□□□ 1.81
TTC39C-205ENST00000578150 ATP6V1AP38606 617 aa26.35■■□□□ 1.81
TTC39C-205ENST00000578150 UBR3Q6ZT12 1888 aa26.35■■□□□ 1.81
TTC39C-205ENST00000578150 LINC00116Q8NCU8 138 aa26.35■■□□□ 1.81
TTC39C-205ENST00000578150 UTRNP46939 3433 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms