RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 CT47B1P0C2W7 299 aaPredicted RBP24.08■■□□□ 1.45
PRKCA-203ENST00000578063 RRP1P56182 461 aaKnown RBP24.08■■□□□ 1.45
PRKCA-203ENST00000578063 TSR2Q969E8 191 aaKnown RBP24.07■■□□□ 1.44
PRKCA-203ENST00000578063 CFAP44Q96MT7 982 aa24.07■■□□□ 1.44
PRKCA-203ENST00000578063 COL14A1Q05707 1796 aaKnown RBP24.07■■□□□ 1.44
PRKCA-203ENST00000578063 ZNF853P0CG23 659 aa24.07■■□□□ 1.44
PRKCA-203ENST00000578063 DCTN1Q14203 1278 aa24.07■■□□□ 1.44
PRKCA-203ENST00000578063 RAPGEF4Q8WZA2 1011 aa24.06■■□□□ 1.44
PRKCA-203ENST00000578063 MCM10Q7L590 875 aa24.05■■□□□ 1.44
PRKCA-203ENST00000578063 LRRC37A3O60309 1634 aa24.04■■□□□ 1.44
PRKCA-203ENST00000578063 CRB1P82279 1406 aa24.04■■□□□ 1.44
PRKCA-203ENST00000578063 ERICH6BQ5W0A0 696 aa24.04■■□□□ 1.44
PRKCA-203ENST00000578063 LAS1LQ9Y4W2 734 aaKnown RBP24.04■■□□□ 1.44
PRKCA-203ENST00000578063 TATP17735 454 aaPredicted RBP24.03■■□□□ 1.44
PRKCA-203ENST00000578063 EXOSC9Q06265 439 aaKnown RBP24.02■■□□□ 1.44
PRKCA-203ENST00000578063 ZNF530Q6P9A1 599 aaPredicted RBP24.02■■□□□ 1.44
PRKCA-203ENST00000578063 TOM1L2Q6ZVM7 507 aa24.02■■□□□ 1.44
PRKCA-203ENST00000578063 AKAP4Q5JQC9 854 aa24.01■■□□□ 1.43
PRKCA-203ENST00000578063 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.01■■□□□ 1.432e-7■■□□□ 11.9
PRKCA-203ENST00000578063 MEGF6O75095 1541 aa24.01■■□□□ 1.43
PRKCA-203ENST00000578063 EVA1CP58658 441 aa24.01■■□□□ 1.43
PRKCA-203ENST00000578063 IRX6P78412 446 aaPredicted RBP24.01■■□□□ 1.43
PRKCA-203ENST00000578063 CARD10Q9BWT7 1032 aa24.01■■□□□ 1.43
PRKCA-203ENST00000578063 MBIPQ9NS73 344 aa24.01■■□□□ 1.43
PRKCA-203ENST00000578063 GOLGA6L2Q8N9W4 650 aaPredicted RBP24■■□□□ 1.43
PRKCA-203ENST00000578063 JCADQ9P266 1359 aa24■■□□□ 1.43
PRKCA-203ENST00000578063 C1orf141Q5JVX7 400 aa23.99■■□□□ 1.43
PRKCA-203ENST00000578063 BTG4Q9NY30 223 aa23.99■■□□□ 1.43
PRKCA-203ENST00000578063 CHL1O00533 1208 aa23.98■■□□□ 1.43
PRKCA-203ENST00000578063 STRN4Q9NRL3 753 aa23.98■■□□□ 1.43
PRKCA-203ENST00000578063 CEMIPQ8WUJ3 1361 aa23.98■■□□□ 1.43
PRKCA-203ENST00000578063 OVOS2A0A0G2JMS6 1433 aa23.98■■□□□ 1.43
PRKCA-203ENST00000578063 RARSP54136 660 aaKnown RBP23.98■■□□□ 1.43
PRKCA-203ENST00000578063 SPG7Q9UQ90 795 aa23.98■■□□□ 1.43
PRKCA-203ENST00000578063 LARP1Q6PKG0 1096 aaKnown RBP23.96■■□□□ 1.43
PRKCA-203ENST00000578063 IL17REQ8NFR9 667 aa23.96■■□□□ 1.43
PRKCA-203ENST00000578063 ZNF428Q96B54 188 aa23.96■■□□□ 1.43
PRKCA-203ENST00000578063 PARP4Q9UKK3 1724 aaKnown RBP23.96■■□□□ 1.43
PRKCA-203ENST00000578063 PKD1L3Q7Z443 1732 aa23.96■■□□□ 1.43
PRKCA-203ENST00000578063 NUTM2BA6NNL0 878 aaPredicted RBP23.96■■□□□ 1.43
PRKCA-203ENST00000578063 NUTM2EB1AL46 878 aaPredicted RBP23.96■■□□□ 1.43
PRKCA-203ENST00000578063 POTEDQ86YR6 584 aa23.96■■□□□ 1.43
PRKCA-203ENST00000578063 NUTM2AQ8IVF1 878 aaPredicted RBP23.96■■□□□ 1.43
PRKCA-203ENST00000578063 BABAM1Q9NWV8 329 aa23.96■■□□□ 1.43
PRKCA-203ENST00000578063 ADAMTS2O95450 1211 aa23.95■■□□□ 1.42
PRKCA-203ENST00000578063 PLCH1Q4KWH8 1693 aa23.93■■□□□ 1.42
PRKCA-203ENST00000578063 BCAR3O75815 825 aa23.93■■□□□ 1.42
PRKCA-203ENST00000578063 TSPYL4Q9UJ04 414 aa23.93■■□□□ 1.42
PRKCA-203ENST00000578063 ADAMTS7Q9UKP4 1686 aa23.91■■□□□ 1.42
PRKCA-203ENST00000578063 PLIN1O60240 522 aa23.91■■□□□ 1.42
PRKCA-203ENST00000578063 IL2RBP14784 551 aa23.91■■□□□ 1.42
PRKCA-203ENST00000578063 TAF7Q15545 349 aaPredicted RBP23.91■■□□□ 1.42
PRKCA-203ENST00000578063 ALDH1L2Q3SY69 923 aa23.9■■□□□ 1.42
PRKCA-203ENST00000578063 SPATA31A6Q5VVP1 1343 aa23.9■■□□□ 1.42
PRKCA-203ENST00000578063 RNMTO43148 476 aaKnown RBP23.9■■□□□ 1.42
PRKCA-203ENST00000578063 PHKG2P15735 406 aa23.9■■□□□ 1.42
PRKCA-203ENST00000578063 IFNL2Q8IZJ0 200 aa23.9■■□□□ 1.42
PRKCA-203ENST00000578063 TWISTNBQ3B726 338 aaPredicted RBP23.89■■□□□ 1.41
PRKCA-203ENST00000578063 MPRIPQ6WCQ1 1025 aa23.89■■□□□ 1.41
PRKCA-203ENST00000578063 NRAPQ86VF7 1730 aa23.88■■□□□ 1.41
PRKCA-203ENST00000578063 VAMP4O75379 141 aa23.88■■□□□ 1.41
PRKCA-203ENST00000578063 TEFQ10587 303 aa23.88■■□□□ 1.41
PRKCA-203ENST00000578063 LGR6Q9HBX8 967 aa23.88■■□□□ 1.41
PRKCA-203ENST00000578063 SMC4Q9NTJ3 1288 aa23.88■■□□□ 1.41
PRKCA-203ENST00000578063 HSP90AB1P08238 724 aaKnown RBP23.87■■□□□ 1.41
PRKCA-203ENST00000578063 HSPA1LP34931 641 aa23.87■■□□□ 1.41
PRKCA-203ENST00000578063 C8orf58Q8NAV2 365 aa23.87■■□□□ 1.41
PRKCA-203ENST00000578063 NWD2Q9ULI1 1742 aa23.87■■□□□ 1.41
PRKCA-203ENST00000578063 PCDH11XQ9BZA7 1347 aa23.87■■□□□ 1.41
PRKCA-203ENST00000578063 PCDH11YQ9BZA8 1340 aa23.87■■□□□ 1.41
PRKCA-203ENST00000578063 CANXP27824 592 aaKnown RBP23.87■■□□□ 1.41
PRKCA-203ENST00000578063 TSPYL6Q8N831 410 aa23.87■■□□□ 1.41
PRKCA-203ENST00000578063 SSH1Q8WYL5 1049 aa23.87■■□□□ 1.41
PRKCA-203ENST00000578063 SLIT2O94813 1529 aa23.87■■□□□ 1.41
PRKCA-203ENST00000578063 ZCRB1Q8TBF4 217 aaKnown RBP23.86■■□□□ 1.41
PRKCA-203ENST00000578063 BCL2L13Q9BXK5 485 aa23.86■■□□□ 1.41
PRKCA-203ENST00000578063 MIS18AQ9NYP9 233 aa23.85■■□□□ 1.41
PRKCA-203ENST00000578063 KDM6AO15550 1401 aaPredicted RBP23.85■■□□□ 1.41
PRKCA-203ENST00000578063 CYP27B1O15528 508 aa23.84■■□□□ 1.41
PRKCA-203ENST00000578063 KIF16BQ96L93 1317 aa23.84■■□□□ 1.41
PRKCA-203ENST00000578063 BRPF1P55201 1214 aaPredicted RBP23.84■■□□□ 1.41
PRKCA-203ENST00000578063 DCAF5Q96JK2 942 aa23.84■■□□□ 1.41
PRKCA-203ENST00000578063 PPP4R2Q9NY27 417 aa23.84■■□□□ 1.41
PRKCA-203ENST00000578063 DISP2A7MBM2 1401 aa23.83■■□□□ 1.41
PRKCA-203ENST00000578063 SOS1Q07889 1333 aaPredicted RBP23.83■■□□□ 1.41
PRKCA-203ENST00000578063 PDE3AQ14432 1141 aa23.83■■□□□ 1.41
PRKCA-203ENST00000578063 USP35Q9P2H5 1018 aa23.83■■□□□ 1.41
PRKCA-203ENST00000578063 ELL2O00472 640 aaPredicted RBP23.82■■□□□ 1.4
PRKCA-203ENST00000578063 FRAT1Q92837 279 aaPredicted RBP23.82■■□□□ 1.4
PRKCA-203ENST00000578063 SCN11AQ9UI33 1791 aa23.82■■□□□ 1.4
PRKCA-203ENST00000578063 VIRMAQ69YN4 1812 aaKnown RBP23.82■■□□□ 1.4
PRKCA-203ENST00000578063 C20orf194Q5TEA3 1177 aa23.81■■□□□ 1.4
PRKCA-203ENST00000578063 MRC1P22897 1456 aa23.81■■□□□ 1.4
PRKCA-203ENST00000578063 KDM3BQ7LBC6 1761 aa23.81■■□□□ 1.4
PRKCA-203ENST00000578063 BTBD11A6QL63 1104 aa23.8■■□□□ 1.4
PRKCA-203ENST00000578063 ZKSCAN2Q63HK3 967 aa23.8■■□□□ 1.4
PRKCA-203ENST00000578063 THRAP3Q9Y2W1 955 aaKnown RBP23.8■■□□□ 1.4
PRKCA-203ENST00000578063 SIPA1L3O60292 1781 aaPredicted RBP23.8■■□□□ 1.4
PRKCA-203ENST00000578063 KRT24Q2M2I5 525 aa23.79■■□□□ 1.4
PRKCA-203ENST00000578063 EXOC6Q8TAG9 804 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms