RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 NBPF4Q96M43 638 aa23.16■■□□□ 1.3
CDK5RAP3-206ENST00000578018 ZBTB7AO95365 584 aa23.15■■□□□ 1.3
CDK5RAP3-206ENST00000578018 ZCRB1Q8TBF4 217 aaKnown RBP23.14■■□□□ 1.29
CDK5RAP3-206ENST00000578018 NSD2O96028 1365 aa23.14■■□□□ 1.29
CDK5RAP3-206ENST00000578018 HSP90AB2PQ58FF8 381 aa23.13■■□□□ 1.29
CDK5RAP3-206ENST00000578018 USHBP1Q8N6Y0 703 aa23.13■■□□□ 1.29
CDK5RAP3-206ENST00000578018 LY75O60449 1722 aa23.13■■□□□ 1.29
CDK5RAP3-206ENST00000578018 PTGER2P43116 358 aa23.12■■□□□ 1.29
CDK5RAP3-206ENST00000578018 QSER1Q2KHR3 1735 aa23.12■■□□□ 1.29
CDK5RAP3-206ENST00000578018 LRRC4BQ9NT99 713 aa23.12■■□□□ 1.29
CDK5RAP3-206ENST00000578018 CGNL1Q0VF96 1302 aa23.11■■□□□ 1.29
CDK5RAP3-206ENST00000578018 ZNF827Q17R98 1081 aa23.1■■□□□ 1.29
CDK5RAP3-206ENST00000578018 PRIM1P49642 420 aaKnown RBP23.09■■□□□ 1.29
CDK5RAP3-206ENST00000578018 RAPGEF4Q8WZA2 1011 aa23.09■■□□□ 1.29
CDK5RAP3-206ENST00000578018 SYTL4Q96C24 671 aaPredicted RBP23.09■■□□□ 1.29
CDK5RAP3-206ENST00000578018 ATF5Q9Y2D1 282 aaPredicted RBP23.09■■□□□ 1.29
CDK5RAP3-206ENST00000578018 EMILIN1Q9Y6C2 1016 aa23.09■■□□□ 1.29
CDK5RAP3-206ENST00000578018 TUBGCP6Q96RT7 1819 aa23.09■■□□□ 1.29
CDK5RAP3-206ENST00000578018 MAP2P11137 1827 aaKnown RBP23.08■■□□□ 1.29
CDK5RAP3-206ENST00000578018 SLC27A3Q5K4L6 730 aa23.08■■□□□ 1.29
CDK5RAP3-206ENST00000578018 MTFR1LQ9H019 292 aa23.08■■□□□ 1.29
CDK5RAP3-206ENST00000578018 PKD1L3Q7Z443 1732 aa23.08■■□□□ 1.28
CDK5RAP3-206ENST00000578018 NCAPD2Q15021 1401 aa23.07■■□□□ 1.28
CDK5RAP3-206ENST00000578018 TATP17735 454 aaPredicted RBP23.06■■□□□ 1.28
CDK5RAP3-206ENST00000578018 AKT1S1Q96B36 256 aa23.05■■□□□ 1.28
CDK5RAP3-206ENST00000578018 SGIP1Q9BQI5 828 aa23.05■■□□□ 1.28
CDK5RAP3-206ENST00000578018 TOGARAM1Q9Y4F4 1720 aa23.04■■□□□ 1.28
CDK5RAP3-206ENST00000578018 PCDH11XQ9BZA7 1347 aa23.04■■□□□ 1.28
CDK5RAP3-206ENST00000578018 PCDH11YQ9BZA8 1340 aa23.04■■□□□ 1.28
CDK5RAP3-206ENST00000578018 COL24A1Q17RW2 1714 aa23.02■■□□□ 1.28
CDK5RAP3-206ENST00000578018 EIF4G2P78344 907 aaKnown RBP eCLIP23.02■■□□□ 1.28
CDK5RAP3-206ENST00000578018 POLR3GLQ9BT43 218 aa23.02■■□□□ 1.28
CDK5RAP3-206ENST00000578018 HSPA5P11021 654 aaKnown RBP23.01■■□□□ 1.27
CDK5RAP3-206ENST00000578018 KCNQ4P56696 695 aa23.01■■□□□ 1.27
CDK5RAP3-206ENST00000578018 WASHC2AQ641Q2 1341 aa23.01■■□□□ 1.27
CDK5RAP3-206ENST00000578018 ITGB4P16144 1822 aa23.01■■□□□ 1.27
CDK5RAP3-206ENST00000578018 PPM1GO15355 546 aaPredicted RBP23■■□□□ 1.27
CDK5RAP3-206ENST00000578018 CCER1Q8TC90 406 aaPredicted RBP23■■□□□ 1.27
CDK5RAP3-206ENST00000578018 PNPLA7Q6ZV29 1317 aa23■■□□□ 1.27
CDK5RAP3-206ENST00000578018 FHDC1Q9C0D6 1143 aaPredicted RBP22.99■■□□□ 1.27
CDK5RAP3-206ENST00000578018 C5P01031 1676 aa22.98■■□□□ 1.27
CDK5RAP3-206ENST00000578018 CYP27B1O15528 508 aa22.98■■□□□ 1.27
CDK5RAP3-206ENST00000578018 CCNL1Q9UK58 526 aaPredicted RBP22.98■■□□□ 1.27
CDK5RAP3-206ENST00000578018 DCAF8L1A6NGE4 600 aa22.97■■□□□ 1.27
CDK5RAP3-206ENST00000578018 POLKQ9UBT6 870 aa22.97■■□□□ 1.27
CDK5RAP3-206ENST00000578018 TAF1LQ8IZX4 1826 aa22.96■■□□□ 1.27
CDK5RAP3-206ENST00000578018 SYT17Q9BSW7 474 aa22.96■■□□□ 1.27
CDK5RAP3-206ENST00000578018 YY1P25490 414 aa22.95■■□□□ 1.26
CDK5RAP3-206ENST00000578018 SLC16A10Q8TF71 515 aa22.95■■□□□ 1.26
CDK5RAP3-206ENST00000578018 ARXQ96QS3 562 aa22.95■■□□□ 1.26
CDK5RAP3-206ENST00000578018 MAP3K5Q99683 1374 aa22.95■■□□□ 1.26
CDK5RAP3-206ENST00000578018 TFCP2L1Q9NZI6 479 aa22.95■■□□□ 1.26
CDK5RAP3-206ENST00000578018 UTRNP46939 3433 aa22.95■■□□□ 1.26
CDK5RAP3-206ENST00000578018 EYA1Q99502 592 aa22.94■■□□□ 1.26
CDK5RAP3-206ENST00000578018 PALLDQ8WX93 1383 aa22.93■■□□□ 1.26
CDK5RAP3-206ENST00000578018 TNNT2P45379 298 aaPredicted RBP22.92■■□□□ 1.26
CDK5RAP3-206ENST00000578018 PANK3Q9H999 370 aa22.92■■□□□ 1.26
CDK5RAP3-206ENST00000578018 MPRIPQ6WCQ1 1025 aa22.91■■□□□ 1.26
CDK5RAP3-206ENST00000578018 EIF4A2Q14240 407 aaKnown RBP22.9■■□□□ 1.26
CDK5RAP3-206ENST00000578018 NKX1-1Q15270 411 aaPredicted RBP22.9■■□□□ 1.26
CDK5RAP3-206ENST00000578018 SPG7Q9UQ90 795 aa22.9■■□□□ 1.26
CDK5RAP3-206ENST00000578018 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.89■■□□□ 1.253e-16■■□□□ 12.1
CDK5RAP3-206ENST00000578018 PLEKHG2Q9H7P9 1386 aa22.89■■□□□ 1.25
CDK5RAP3-206ENST00000578018 C4BP0C0L5 1744 aa22.88■■□□□ 1.25
CDK5RAP3-206ENST00000578018 POLD1P28340 1107 aa22.87■■□□□ 1.25
CDK5RAP3-206ENST00000578018 IGSF1Q8N6C5 1336 aa22.86■■□□□ 1.25
CDK5RAP3-206ENST00000578018 PIGBQ92521 554 aa22.86■■□□□ 1.25
CDK5RAP3-206ENST00000578018 CHD4Q14839 1912 aa22.86■■□□□ 1.25
CDK5RAP3-206ENST00000578018 COL23A1Q86Y22 540 aaPredicted RBP22.85■■□□□ 1.25
CDK5RAP3-206ENST00000578018 SMARCC1Q92922 1105 aaPredicted RBP22.85■■□□□ 1.25
CDK5RAP3-206ENST00000578018 UBR3Q6ZT12 1888 aa22.84■■□□□ 1.25
CDK5RAP3-206ENST00000578018 PHKG2P15735 406 aa22.84■■□□□ 1.25
CDK5RAP3-206ENST00000578018 HMGB2P26583 209 aaKnown RBP22.82■■□□□ 1.24
CDK5RAP3-206ENST00000578018 IFNL2Q8IZJ0 200 aa22.82■■□□□ 1.24
CDK5RAP3-206ENST00000578018 MSH5O43196 834 aa22.81■■□□□ 1.24
CDK5RAP3-206ENST00000578018 MORC1Q86VD1 984 aa22.8■■□□□ 1.24
CDK5RAP3-206ENST00000578018 KLHL34Q8N239 644 aa22.8■■□□□ 1.24
CDK5RAP3-206ENST00000578018 TMOD3Q9NYL9 352 aa22.8■■□□□ 1.24
CDK5RAP3-206ENST00000578018 GOLGB1Q14789 3259 aaKnown RBP22.8■■□□□ 1.24
CDK5RAP3-206ENST00000578018 KIF7Q2M1P5 1343 aa22.79■■□□□ 1.24
CDK5RAP3-206ENST00000578018 FLAD1Q8NFF5 587 aa22.78■■□□□ 1.24
CDK5RAP3-206ENST00000578018 KNSTRNQ9Y448 316 aa22.78■■□□□ 1.24
CDK5RAP3-206ENST00000578018 LOC102724428A0A0B4J2F2 783 aa22.77■■□□□ 1.24
CDK5RAP3-206ENST00000578018 SIK1P57059 783 aa22.77■■□□□ 1.24
CDK5RAP3-206ENST00000578018 MSL1Q68DK7 614 aa22.77■■□□□ 1.24
CDK5RAP3-206ENST00000578018 AMIGO3Q86WK7 504 aa22.77■■□□□ 1.24
CDK5RAP3-206ENST00000578018 AK7Q96M32 723 aa22.77■■□□□ 1.24
CDK5RAP3-206ENST00000578018 ASAP1Q9ULH1 1129 aa22.77■■□□□ 1.24
CDK5RAP3-206ENST00000578018 NLGN2Q8NFZ4 835 aa22.76■■□□□ 1.23
CDK5RAP3-206ENST00000578018 AMER1Q5JTC6 1135 aaPredicted RBP22.75■■□□□ 1.23
CDK5RAP3-206ENST00000578018 LINC00116Q8NCU8 138 aa22.75■■□□□ 1.23
CDK5RAP3-206ENST00000578018 ZNF831Q5JPB2 1677 aa22.74■■□□□ 1.23
CDK5RAP3-206ENST00000578018 KDM6AO15550 1401 aaPredicted RBP22.74■■□□□ 1.23
CDK5RAP3-206ENST00000578018 AEBP1Q8IUX7 1158 aa22.74■■□□□ 1.23
CDK5RAP3-206ENST00000578018 KDRP35968 1356 aa22.74■■□□□ 1.23
CDK5RAP3-206ENST00000578018 ITPK1Q13572 414 aa22.73■■□□□ 1.23
CDK5RAP3-206ENST00000578018 GPR162Q16538 588 aa22.73■■□□□ 1.23
CDK5RAP3-206ENST00000578018 PLEKHO1Q53GL0 409 aaPredicted RBP22.73■■□□□ 1.23
CDK5RAP3-206ENST00000578018 ATG3Q9NT62 314 aa22.73■■□□□ 1.23
CDK5RAP3-206ENST00000578018 DCAF5Q96JK2 942 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms