RNA–Protein interactions for RNA: ENST00000577978.1

DDX42-205, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 581 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-205ENST00000577978 KDF1Q8NAX2 398 aaPredicted RBP7.28□□□□□ -1.24
DDX42-205ENST00000577978 NDUFB9Q9Y6M9 179 aa7.28□□□□□ -1.24
DDX42-205ENST00000577978 ATP5J2-PTCD1G3V325 749 aa7.27□□□□□ -1.25
DDX42-205ENST00000577978 GDF11O95390 407 aa7.27□□□□□ -1.25
DDX42-205ENST00000577978 GPC1P35052 558 aa7.27□□□□□ -1.25
DDX42-205ENST00000577978 RNF144AP50876 292 aaPredicted RBP7.27□□□□□ -1.25
DDX42-205ENST00000577978 KRT76Q01546 638 aa7.27□□□□□ -1.25
DDX42-205ENST00000577978 CNTNAP3BQ96NU0 1288 aa7.27□□□□□ -1.25
DDX42-205ENST00000577978 COL25A1Q9BXS0 654 aaPredicted RBP7.27□□□□□ -1.25
DDX42-205ENST00000577978 CNTNAP3Q9BZ76 1288 aa7.27□□□□□ -1.25
DDX42-205ENST00000577978 CDC14CA4D256 554 aa7.26□□□□□ -1.25
DDX42-205ENST00000577978 ERVK-9P63128 1117 aa7.26□□□□□ -1.25
DDX42-205ENST00000577978 RASSF7Q02833 373 aa7.26□□□□□ -1.25
DDX42-205ENST00000577978 CC2D2BQ6DHV5 1058 aa7.26□□□□□ -1.25
DDX42-205ENST00000577978 VWA5B2Q8N398 1253 aa7.26□□□□□ -1.25
DDX42-205ENST00000577978 SENP3-EIF4A1A0A087X0R7 540 aa7.25□□□□□ -1.25
DDX42-205ENST00000577978 CYP2U1Q7Z449 544 aa7.25□□□□□ -1.25
DDX42-205ENST00000577978 MTMR14Q8NCE2 650 aa7.25□□□□□ -1.25
DDX42-205ENST00000577978 GMCL1Q96IK5 515 aa7.24□□□□□ -1.25
DDX42-205ENST00000577978 ESF1Q9H501 851 aaKnown RBP7.24□□□□□ -1.25
DDX42-205ENST00000577978 SLURP2P0DP57 97 aa7.23□□□□□ -1.25
DDX42-205ENST00000577978 NLRP3Q96P20 1036 aa7.23□□□□□ -1.25
DDX42-205ENST00000577978 PRM3Q9NNZ6 103 aa7.23□□□□□ -1.25
DDX42-205ENST00000577978 ADAMTS8Q9UP79 889 aa7.23□□□□□ -1.25
DDX42-205ENST00000577978 A0A1W2PRU2 124 aa7.22□□□□□ -1.25
DDX42-205ENST00000577978 RNF225M0QZC1 329 aaPredicted RBP7.22□□□□□ -1.25
DDX42-205ENST00000577978 MEN1O00255 615 aa7.22□□□□□ -1.25
DDX42-205ENST00000577978 GPR37L1O60883 481 aa7.22□□□□□ -1.25
DDX42-205ENST00000577978 RNFT1Q5M7Z0 435 aa7.22□□□□□ -1.25
DDX42-205ENST00000577978 PRICKLE2Q7Z3G6 844 aa7.22□□□□□ -1.25
DDX42-205ENST00000577978 PCDHB11Q9Y5F2 797 aa7.22□□□□□ -1.25
DDX42-205ENST00000577978 CLN3Q13286 438 aa7.21□□□□□ -1.26
DDX42-205ENST00000577978 TRAK2O60296 914 aa7.2□□□□□ -1.26
DDX42-205ENST00000577978 WDR44Q5JSH3 913 aa7.2□□□□□ -1.26
DDX42-205ENST00000577978 SLC27A3Q5K4L6 730 aa7.2□□□□□ -1.26
DDX42-205ENST00000577978 FOXR1Q6PIV2 292 aa7.2□□□□□ -1.26
DDX42-205ENST00000577978 SVOPQ8N4V2 548 aa7.2□□□□□ -1.26
DDX42-205ENST00000577978 SNRKQ9NRH2 765 aa7.2□□□□□ -1.26
DDX42-205ENST00000577978 DYRK1BQ9Y463 629 aa7.2□□□□□ -1.26
DDX42-205ENST00000577978 H7C1W4 665 aa7.19□□□□□ -1.26
DDX42-205ENST00000577978 RHOQP17081 205 aa7.19□□□□□ -1.26
DDX42-205ENST00000577978 ZNF385CQ66K41 422 aaPredicted RBP7.19□□□□□ -1.26
DDX42-205ENST00000577978 TRIM22Q8IYM9 498 aa7.19□□□□□ -1.26
DDX42-205ENST00000577978 MYCP01106 439 aaPredicted RBP7.18□□□□□ -1.26
DDX42-205ENST00000577978 GNRH1P01148 92 aa7.18□□□□□ -1.26
DDX42-205ENST00000577978 SCTRP47872 440 aa7.18□□□□□ -1.26
DDX42-205ENST00000577978 SRSF11Q05519 484 aaKnown RBP7.18□□□□□ -1.26
DDX42-205ENST00000577978 GRIP2Q9C0E4 1043 aa7.18□□□□□ -1.26
DDX42-205ENST00000577978 OSBPL3Q9H4L5 887 aa7.18□□□□□ -1.26
DDX42-205ENST00000577978 SPATA31C2B4DYI2 1134 aa7.17□□□□□ -1.26
DDX42-205ENST00000577978 EIF4G2P78344 907 aaKnown RBP eCLIP7.17□□□□□ -1.26
DDX42-205ENST00000577978 GPAT2Q6NUI2 795 aa7.17□□□□□ -1.26
DDX42-205ENST00000577978 NBPF10Q6P3W6 841 aaKnown RBP7.17□□□□□ -1.26
DDX42-205ENST00000577978 NBPF15Q8N660 670 aa7.17□□□□□ -1.26
DDX42-205ENST00000577978 ZNF837Q96EG3 531 aaPredicted RBP7.17□□□□□ -1.26
DDX42-205ENST00000577978 ARHGEF10LQ9HCE6 1279 aa7.17□□□□□ -1.26
DDX42-205ENST00000577978 CUEDC1Q9NWM3 386 aaPredicted RBP7.17□□□□□ -1.26
DDX42-205ENST00000577978 CEP126Q9P2H0 1117 aa7.17□□□□□ -1.26
DDX42-205ENST00000577978 ADAMTS2O95450 1211 aa7.16□□□□□ -1.26
DDX42-205ENST00000577978 RIPOR1Q6ZS17 1223 aa7.16□□□□□ -1.26
DDX42-205ENST00000577978 ARHGEF15O94989 841 aa7.15□□□□□ -1.26
DDX42-205ENST00000577978 IRS1P35568 1242 aa7.15□□□□□ -1.26
DDX42-205ENST00000577978 MAP3K10Q02779 954 aa7.15□□□□□ -1.26
DDX42-205ENST00000577978 POU4F2Q12837 409 aa7.15□□□□□ -1.26
DDX42-205ENST00000577978 GAS6Q14393 721 aa7.15□□□□□ -1.26
DDX42-205ENST00000577978 TAS1R3Q7RTX0 852 aa7.15□□□□□ -1.26
DDX42-205ENST00000577978 TRERF1Q96PN7 1200 aa7.15□□□□□ -1.26
DDX42-205ENST00000577978 MBIPQ9NS73 344 aa7.15□□□□□ -1.26
DDX42-205ENST00000577978 TBC1D2BQ9UPU7 963 aa7.15□□□□□ -1.26
DDX42-205ENST00000577978 WASLO00401 505 aaPredicted RBP7.14□□□□□ -1.27
DDX42-205ENST00000577978 WHAMMQ8TF30 809 aa7.14□□□□□ -1.27
DDX42-205ENST00000577978 ESYT1Q9BSJ8 1104 aa7.14□□□□□ -1.27
DDX42-205ENST00000577978 TIMMDC1Q9NPL8 285 aa7.14□□□□□ -1.27
DDX42-205ENST00000577978 PRKCSHP14314 528 aaPredicted RBP7.13□□□□□ -1.27
DDX42-205ENST00000577978 GTF2E1P29083 439 aaPredicted RBP7.13□□□□□ -1.27
DDX42-205ENST00000577978 MARSP56192 900 aaKnown RBP7.13□□□□□ -1.27
DDX42-205ENST00000577978 DBN1Q16643 649 aa7.13□□□□□ -1.27
DDX42-205ENST00000577978 ESCO1Q5FWF5 840 aa7.13□□□□□ -1.27
DDX42-205ENST00000577978 CNKSR1Q969H4 720 aa7.13□□□□□ -1.27
DDX42-205ENST00000577978 CCDC85AQ96PX6 553 aaPredicted RBP7.13□□□□□ -1.27
DDX42-205ENST00000577978 GAS2L1Q99501 681 aaPredicted RBP7.13□□□□□ -1.27
DDX42-205ENST00000577978 ENAMQ9NRM1 1142 aa7.13□□□□□ -1.27
DDX42-205ENST00000577978 F11P03951 625 aa7.12□□□□□ -1.27
DDX42-205ENST00000577978 USP4Q13107 963 aa7.12□□□□□ -1.27
DDX42-205ENST00000577978 SLFNL1Q499Z3 407 aa7.12□□□□□ -1.27
DDX42-205ENST00000577978 SIRT1Q96EB6 747 aa7.12□□□□□ -1.27
DDX42-205ENST00000577978 SCARF2Q96GP6 870 aaPredicted RBP7.12□□□□□ -1.27
DDX42-205ENST00000577978 RAB6BQ9NRW1 208 aa7.12□□□□□ -1.27
DDX42-205ENST00000577978 NSFL1CQ9UNZ2 370 aaKnown RBP7.12□□□□□ -1.27
DDX42-205ENST00000577978 DOLKQ9UPQ8 538 aa7.12□□□□□ -1.27
DDX42-205ENST00000577978 DNMT3AQ9Y6K1 912 aaPredicted RBP7.12□□□□□ -1.27
DDX42-205ENST00000577978 IL2RAP01589 272 aa7.11□□□□□ -1.27
DDX42-205ENST00000577978 CENPCQ03188 943 aa7.11□□□□□ -1.27
DDX42-205ENST00000577978 GNASQ5JWF2 1037 aa7.11□□□□□ -1.27
DDX42-205ENST00000577978 KANK3Q6NY19 840 aa7.11□□□□□ -1.27
DDX42-205ENST00000577978 LYPD4Q6UWN0 246 aa7.11□□□□□ -1.27
DDX42-205ENST00000577978 GTPBP3Q969Y2 492 aaKnown RBP7.11□□□□□ -1.27
DDX42-205ENST00000577978 XAGE2Q96GT9 111 aa7.11□□□□□ -1.27
DDX42-205ENST00000577978 ZSCAN10Q96SZ4 725 aaPredicted RBP7.11□□□□□ -1.27
DDX42-205ENST00000577978 CDCA7Q9BWT1 371 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms