RNA–Protein interactions for RNA: ENST00000577967.1

NF1-218, Transcript of neurofibromin 1, humanhuman

Gene NF1, Length 5,799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-218ENST00000577967 E9PCH4 1651 aa5.65□□□□□ -1.5
NF1-218ENST00000577967 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.65□□□□□ -1.51
NF1-218ENST00000577967 DDX11L8A8MPP1 907 aa5.65□□□□□ -1.51
NF1-218ENST00000577967 SRGAP3O43295 1099 aa5.65□□□□□ -1.51
NF1-218ENST00000577967 ZKSCAN1P17029 563 aaPredicted RBP5.65□□□□□ -1.51
NF1-218ENST00000577967 ERC1Q8IUD2 1116 aa5.65□□□□□ -1.51
NF1-218ENST00000577967 NOL10Q9BSC4 688 aaKnown RBP5.65□□□□□ -1.51
NF1-218ENST00000577967 PIK3C2GO75747 1445 aa5.65□□□□□ -1.51
NF1-218ENST00000577967 RAD21O60216 631 aa5.65□□□□□ -1.51
NF1-218ENST00000577967 IGHDP01880 384 aa5.65□□□□□ -1.51
NF1-218ENST00000577967 TNNQ9UQP3 1299 aa5.65□□□□□ -1.51
NF1-218ENST00000577967 MLH3Q9UHC1 1453 aa5.65□□□□□ -1.51
NF1-218ENST00000577967 ABCA9Q8IUA7 1624 aa5.65□□□□□ -1.51
NF1-218ENST00000577967 HTATSF1O43719 755 aaKnown RBP5.65□□□□□ -1.51
NF1-218ENST00000577967 CSPP1Q1MSJ5 1256 aa5.65□□□□□ -1.51
NF1-218ENST00000577967 MTHFSDQ2M296 383 aaKnown RBP5.65□□□□□ -1.51
NF1-218ENST00000577967 CLASRPQ8N2M8 674 aaKnown RBP5.65□□□□□ -1.51
NF1-218ENST00000577967 DDX17Q92841 729 aaKnown RBP5.65□□□□□ -1.51
NF1-218ENST00000577967 SYAP1Q96A49 352 aaPredicted RBP5.65□□□□□ -1.51
NF1-218ENST00000577967 ZMYM4Q5VZL5 1548 aa5.64□□□□□ -1.51
NF1-218ENST00000577967 SYNMO15061 1565 aa5.64□□□□□ -1.51
NF1-218ENST00000577967 RIMBP3CA6NJZ7 1639 aa5.64□□□□□ -1.51
NF1-218ENST00000577967 RIMBP3BA6NNM3 1639 aa5.64□□□□□ -1.51
NF1-218ENST00000577967 RIMBP3Q9UFD9 1639 aa5.64□□□□□ -1.51
NF1-218ENST00000577967 ZFYVE9O95405 1425 aa5.64□□□□□ -1.51
NF1-218ENST00000577967 LRRFIP1Q32MZ4 808 aaKnown RBP5.64□□□□□ -1.51
NF1-218ENST00000577967 NFXL1Q6ZNB6 911 aa5.64□□□□□ -1.51
NF1-218ENST00000577967 STK11IPQ8N1F8 1099 aa5.64□□□□□ -1.51
NF1-218ENST00000577967 EFCAB6Q5THR3 1501 aa5.64□□□□□ -1.51
NF1-218ENST00000577967 BACH2Q9BYV9 841 aa5.64□□□□□ -1.51
NF1-218ENST00000577967 PHF23Q9BUL5 403 aaPredicted RBP5.64□□□□□ -1.51
NF1-218ENST00000577967 EXOC6BQ9Y2D4 811 aa5.64□□□□□ -1.51
NF1-218ENST00000577967 MAP3K2Q9Y2U5 619 aa5.64□□□□□ -1.51
NF1-218ENST00000577967 CAMSAP1Q5T5Y3 1602 aa5.64□□□□□ -1.51
NF1-218ENST00000577967 CLTCQ00610 1675 aaKnown RBP5.64□□□□□ -1.51
NF1-218ENST00000577967 LTKP29376 864 aa5.64□□□□□ -1.51
NF1-218ENST00000577967 RNF20Q5VTR2 975 aa5.64□□□□□ -1.51
NF1-218ENST00000577967 MSNP26038 577 aaKnown RBP5.63□□□□□ -1.51
NF1-218ENST00000577967 HOXC9P31274 260 aa5.63□□□□□ -1.51
NF1-218ENST00000577967 C8orf58Q8NAV2 365 aa5.63□□□□□ -1.51
NF1-218ENST00000577967 JARID2Q92833 1246 aaPredicted RBP5.63□□□□□ -1.51
NF1-218ENST00000577967 PHACTR3Q96KR7 559 aa5.63□□□□□ -1.51
NF1-218ENST00000577967 TMEM2Q9UHN6 1383 aa5.63□□□□□ -1.51
NF1-218ENST00000577967 MYOM2P54296 1465 aa5.63□□□□□ -1.51
NF1-218ENST00000577967 SYNE3Q6ZMZ3 975 aa5.63□□□□□ -1.51
NF1-218ENST00000577967 LRRFIP2Q9Y608 721 aaKnown RBP5.63□□□□□ -1.51
NF1-218ENST00000577967 SPATA31E1Q6ZUB1 1445 aa5.63□□□□□ -1.51
NF1-218ENST00000577967 ERVK-7P63135 1459 aa5.63□□□□□ -1.51
NF1-218ENST00000577967 CLSTN1O94985 981 aa5.63□□□□□ -1.51
NF1-218ENST00000577967 MAGI2Q86UL8 1455 aa5.63□□□□□ -1.51
NF1-218ENST00000577967 RSPH6AQ9H0K4 717 aa5.63□□□□□ -1.51
NF1-218ENST00000577967 MAP3K4Q9Y6R4 1608 aa5.63□□□□□ -1.51
NF1-218ENST00000577967 IL16Q14005 1332 aa5.63□□□□□ -1.51
NF1-218ENST00000577967 CCDC158Q5M9N0 1113 aa5.63□□□□□ -1.51
NF1-218ENST00000577967 AMOTL1Q8IY63 956 aa5.63□□□□□ -1.51
NF1-218ENST00000577967 MRPL50Q8N5N7 158 aaKnown RBP5.63□□□□□ -1.51
NF1-218ENST00000577967 EDC4Q6P2E9 1401 aaKnown RBP5.63□□□□□ -1.51
NF1-218ENST00000577967 TRIM34Q9BYJ4 488 aa5.63□□□□□ -1.51
NF1-218ENST00000577967 METP08581 1390 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 BCORL1Q5H9F3 1711 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 ANXA1P04083 346 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 PIP4K2AP48426 406 aaPredicted RBP5.62□□□□□ -1.51
NF1-218ENST00000577967 CCDC57Q2TAC2 916 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 VPS53Q5VIR6 699 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 CADPS2Q86UW7 1296 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 SMC3Q9UQE7 1217 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 DDX49Q9Y6V7 483 aaKnown RBP5.62□□□□□ -1.51
NF1-218ENST00000577967 SF3A1Q15459 793 aaKnown RBP5.62□□□□□ -1.51
NF1-218ENST00000577967 CWC27Q6UX04 472 aaKnown RBP5.62□□□□□ -1.51
NF1-218ENST00000577967 CREBRFQ8IUR6 639 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 PUS7Q96PZ0 661 aaKnown RBP5.62□□□□□ -1.51
NF1-218ENST00000577967 CHMP5Q9NZZ3 219 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 CHPF2Q9P2E5 772 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 PLA2R1Q13018 1463 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 PTPRTO14522 1441 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 QRICH2Q9H0J4 1663 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 PTPRCP08575 1304 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 STARD3NLO95772 234 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 AKAP17AQ02040 695 aaKnown RBP5.62□□□□□ -1.51
NF1-218ENST00000577967 FLIIQ13045 1269 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 SLC39A6Q13433 755 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 IFNL2Q8IZJ0 200 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 RASSF8Q8NHQ8 419 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 VPS37CA5D8V6 355 aaPredicted RBP5.62□□□□□ -1.51
NF1-218ENST00000577967 FKBP4Q02790 459 aaKnown RBP eCLIP5.62□□□□□ -1.51
NF1-218ENST00000577967 TRDNQ13061 729 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 KRT24Q2M2I5 525 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 RPAP2Q8IXW5 612 aaPredicted RBP5.62□□□□□ -1.51
NF1-218ENST00000577967 TSPYL6Q8N831 410 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 DNAAF4Q8WXU2 420 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 ORAI2Q96SN7 254 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 MTMR7Q9Y216 660 aa5.62□□□□□ -1.51
NF1-218ENST00000577967 ACSBG1Q96GR2 724 aa5.61□□□□□ -1.51
NF1-218ENST00000577967 EYA1Q99502 592 aa5.61□□□□□ -1.51
NF1-218ENST00000577967 TBX22Q9Y458 520 aa5.61□□□□□ -1.51
NF1-218ENST00000577967 DMRT2Q9Y5R5 561 aa5.61□□□□□ -1.51
NF1-218ENST00000577967 FLT4P35916 1363 aa5.61□□□□□ -1.51
NF1-218ENST00000577967 ERICH2A1L162 156 aa5.61□□□□□ -1.51
NF1-218ENST00000577967 IL13P35225 146 aa5.61□□□□□ -1.51
NF1-218ENST00000577967 RNF17Q9BXT8 1623 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms