RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 SYTL4Q96C24 671 aaPredicted RBP20.71■□□□□ 0.91
RN7SL560P-201ENST00000577943 POLR3GLQ9BT43 218 aa20.71■□□□□ 0.91
RN7SL560P-201ENST00000577943 INSRP06213 1382 aa20.71■□□□□ 0.91
RN7SL560P-201ENST00000577943 FLT4P35916 1363 aa20.71■□□□□ 0.91
RN7SL560P-201ENST00000577943 HSP90AB2PQ58FF8 381 aa20.7■□□□□ 0.9
RN7SL560P-201ENST00000577943 CCER1Q8TC90 406 aaPredicted RBP20.7■□□□□ 0.9
RN7SL560P-201ENST00000577943 RAPGEF4Q8WZA2 1011 aa20.7■□□□□ 0.9
RN7SL560P-201ENST00000577943 PAPPAQ13219 1627 aa20.69■□□□□ 0.9
RN7SL560P-201ENST00000577943 KIF24Q5T7B8 1368 aa20.69■□□□□ 0.9
RN7SL560P-201ENST00000577943 PRIM1P49642 420 aaKnown RBP20.68■□□□□ 0.9
RN7SL560P-201ENST00000577943 ATF5Q9Y2D1 282 aaPredicted RBP20.68■□□□□ 0.9
RN7SL560P-201ENST00000577943 CGNL1Q0VF96 1302 aa20.68■□□□□ 0.9
RN7SL560P-201ENST00000577943 TATP17735 454 aaPredicted RBP20.67■□□□□ 0.9
RN7SL560P-201ENST00000577943 EMILIN1Q9Y6C2 1016 aa20.67■□□□□ 0.9
RN7SL560P-201ENST00000577943 PPM1GO15355 546 aaPredicted RBP20.66■□□□□ 0.9
RN7SL560P-201ENST00000577943 EIF4G2P78344 907 aaKnown RBP eCLIP20.66■□□□□ 0.9
RN7SL560P-201ENST00000577943 LRRC4BQ9NT99 713 aa20.66■□□□□ 0.9
RN7SL560P-201ENST00000577943 LY75O60449 1722 aa20.65■□□□□ 0.9
RN7SL560P-201ENST00000577943 ANKRD26Q9UPS8 1709 aa20.65■□□□□ 0.9
RN7SL560P-201ENST00000577943 SLC27A3Q5K4L6 730 aa20.65■□□□□ 0.9
RN7SL560P-201ENST00000577943 MTFR1LQ9H019 292 aa20.64■□□□□ 0.89
RN7SL560P-201ENST00000577943 DCAF8L1A6NGE4 600 aa20.63■□□□□ 0.89
RN7SL560P-201ENST00000577943 HSPA5P11021 654 aaKnown RBP20.63■□□□□ 0.89
RN7SL560P-201ENST00000577943 PTGER2P43116 358 aa20.63■□□□□ 0.89
RN7SL560P-201ENST00000577943 ZNF827Q17R98 1081 aa20.63■□□□□ 0.89
RN7SL560P-201ENST00000577943 QSER1Q2KHR3 1735 aa20.63■□□□□ 0.89
RN7SL560P-201ENST00000577943 TUBGCP6Q96RT7 1819 aa20.62■□□□□ 0.89
RN7SL560P-201ENST00000577943 NSD2O96028 1365 aa20.61■□□□□ 0.89
RN7SL560P-201ENST00000577943 PCDH11XQ9BZA7 1347 aa20.61■□□□□ 0.89
RN7SL560P-201ENST00000577943 PCDH11YQ9BZA8 1340 aa20.61■□□□□ 0.89
RN7SL560P-201ENST00000577943 ITGB4P16144 1822 aa20.6■□□□□ 0.89
RN7SL560P-201ENST00000577943 KCNQ4P56696 695 aa20.6■□□□□ 0.89
RN7SL560P-201ENST00000577943 PKD1L3Q7Z443 1732 aa20.59■□□□□ 0.89
RN7SL560P-201ENST00000577943 AKT1S1Q96B36 256 aa20.59■□□□□ 0.89
RN7SL560P-201ENST00000577943 WASHC2AQ641Q2 1341 aa20.58■□□□□ 0.89
RN7SL560P-201ENST00000577943 TNNT2P45379 298 aaPredicted RBP20.57■□□□□ 0.88
RN7SL560P-201ENST00000577943 TFCP2L1Q9NZI6 479 aa20.57■□□□□ 0.88
RN7SL560P-201ENST00000577943 POLKQ9UBT6 870 aa20.57■□□□□ 0.88
RN7SL560P-201ENST00000577943 CCNL1Q9UK58 526 aaPredicted RBP20.57■□□□□ 0.88
RN7SL560P-201ENST00000577943 SGIP1Q9BQI5 828 aa20.56■□□□□ 0.88
RN7SL560P-201ENST00000577943 PANK3Q9H999 370 aa20.56■□□□□ 0.88
RN7SL560P-201ENST00000577943 CYP27B1O15528 508 aa20.55■□□□□ 0.88
RN7SL560P-201ENST00000577943 EYA1Q99502 592 aa20.55■□□□□ 0.88
RN7SL560P-201ENST00000577943 FHDC1Q9C0D6 1143 aaPredicted RBP20.55■□□□□ 0.88
RN7SL560P-201ENST00000577943 TAF1LQ8IZX4 1826 aa20.55■□□□□ 0.88
RN7SL560P-201ENST00000577943 NCAPD2Q15021 1401 aa20.54■□□□□ 0.88
RN7SL560P-201ENST00000577943 TOGARAM1Q9Y4F4 1720 aa20.54■□□□□ 0.88
RN7SL560P-201ENST00000577943 PNPLA7Q6ZV29 1317 aa20.53■□□□□ 0.88
RN7SL560P-201ENST00000577943 YY1P25490 414 aa20.53■□□□□ 0.88
RN7SL560P-201ENST00000577943 MPRIPQ6WCQ1 1025 aa20.53■□□□□ 0.88
RN7SL560P-201ENST00000577943 SLC16A10Q8TF71 515 aa20.53■□□□□ 0.88
RN7SL560P-201ENST00000577943 ARXQ96QS3 562 aa20.53■□□□□ 0.88
RN7SL560P-201ENST00000577943 SYT17Q9BSW7 474 aa20.53■□□□□ 0.88
RN7SL560P-201ENST00000577943 SPG7Q9UQ90 795 aa20.53■□□□□ 0.88
RN7SL560P-201ENST00000577943 C5P01031 1676 aa20.53■□□□□ 0.88
RN7SL560P-201ENST00000577943 COL24A1Q17RW2 1714 aa20.51■□□□□ 0.87
RN7SL560P-201ENST00000577943 EIF4A2Q14240 407 aaKnown RBP20.5■□□□□ 0.87
RN7SL560P-201ENST00000577943 CHD4Q14839 1912 aa20.49■□□□□ 0.87
RN7SL560P-201ENST00000577943 PALLDQ8WX93 1383 aa20.49■□□□□ 0.87
RN7SL560P-201ENST00000577943 POLD1P28340 1107 aa20.49■□□□□ 0.87
RN7SL560P-201ENST00000577943 MSH5O43196 834 aa20.48■□□□□ 0.87
RN7SL560P-201ENST00000577943 HMGB2P26583 209 aaKnown RBP20.48■□□□□ 0.87
RN7SL560P-201ENST00000577943 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.48■□□□□ 0.87
RN7SL560P-201ENST00000577943 NKX1-1Q15270 411 aaPredicted RBP20.47■□□□□ 0.87
RN7SL560P-201ENST00000577943 SMARCC1Q92922 1105 aaPredicted RBP20.47■□□□□ 0.87
RN7SL560P-201ENST00000577943 MORC1Q86VD1 984 aa20.46■□□□□ 0.87
RN7SL560P-201ENST00000577943 KLHL34Q8N239 644 aa20.46■□□□□ 0.87
RN7SL560P-201ENST00000577943 UTRNP46939 3433 aa20.45■□□□□ 0.86
RN7SL560P-201ENST00000577943 IFNL2Q8IZJ0 200 aa20.45■□□□□ 0.86
RN7SL560P-201ENST00000577943 PIGBQ92521 554 aa20.45■□□□□ 0.86
RN7SL560P-201ENST00000577943 KNSTRNQ9Y448 316 aa20.45■□□□□ 0.86
RN7SL560P-201ENST00000577943 MAP3K5Q99683 1374 aa20.45■□□□□ 0.86
RN7SL560P-201ENST00000577943 COL23A1Q86Y22 540 aaPredicted RBP20.44■□□□□ 0.86
RN7SL560P-201ENST00000577943 C4BP0C0L5 1744 aa20.44■□□□□ 0.86
RN7SL560P-201ENST00000577943 PHKG2P15735 406 aa20.43■□□□□ 0.86
RN7SL560P-201ENST00000577943 TMOD3Q9NYL9 352 aa20.43■□□□□ 0.86
RN7SL560P-201ENST00000577943 IGSF1Q8N6C5 1336 aa20.43■□□□□ 0.86
RN7SL560P-201ENST00000577943 UBR3Q6ZT12 1888 aa20.42■□□□□ 0.86
RN7SL560P-201ENST00000577943 FLAD1Q8NFF5 587 aa20.4■□□□□ 0.86
RN7SL560P-201ENST00000577943 AK7Q96M32 723 aa20.4■□□□□ 0.86
RN7SL560P-201ENST00000577943 PLEKHG2Q9H7P9 1386 aa20.4■□□□□ 0.86
RN7SL560P-201ENST00000577943 KIF7Q2M1P5 1343 aa20.39■□□□□ 0.85
RN7SL560P-201ENST00000577943 LOC102724428A0A0B4J2F2 783 aa20.38■□□□□ 0.85
RN7SL560P-201ENST00000577943 SIK1P57059 783 aa20.38■□□□□ 0.85
RN7SL560P-201ENST00000577943 PLEKHO1Q53GL0 409 aaPredicted RBP20.38■□□□□ 0.85
RN7SL560P-201ENST00000577943 MSL1Q68DK7 614 aa20.38■□□□□ 0.85
RN7SL560P-201ENST00000577943 ASAP1Q9ULH1 1129 aa20.38■□□□□ 0.85
RN7SL560P-201ENST00000577943 GPR162Q16538 588 aa20.37■□□□□ 0.85
RN7SL560P-201ENST00000577943 HSP90AB1P08238 724 aaKnown RBP20.36■□□□□ 0.85
RN7SL560P-201ENST00000577943 PHF14O94880 888 aa20.35■□□□□ 0.85
RN7SL560P-201ENST00000577943 AMOTQ4VCS5 1084 aa20.35■□□□□ 0.85
RN7SL560P-201ENST00000577943 AMER1Q5JTC6 1135 aaPredicted RBP20.35■□□□□ 0.85
RN7SL560P-201ENST00000577943 ZNF530Q6P9A1 599 aaPredicted RBP20.35■□□□□ 0.85
RN7SL560P-201ENST00000577943 PELP1Q8IZL8 1130 aaKnown RBP20.35■□□□□ 0.85
RN7SL560P-201ENST00000577943 GOLGB1Q14789 3259 aaKnown RBP20.35■□□□□ 0.85
RN7SL560P-201ENST00000577943 ATP6V1AP38606 617 aa20.34■□□□□ 0.85
RN7SL560P-201ENST00000577943 LINC00116Q8NCU8 138 aa20.34■□□□□ 0.85
RN7SL560P-201ENST00000577943 DCAF5Q96JK2 942 aa20.34■□□□□ 0.85
RN7SL560P-201ENST00000577943 ATG3Q9NT62 314 aa20.34■□□□□ 0.85
RN7SL560P-201ENST00000577943 ERVV-2B6SEH9 535 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms