RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 FAM182BQ5T319 152 aa16.56■□□□□ 0.24
RARA-208ENST00000577646 FAM196AQ6ZSG2 479 aa16.56■□□□□ 0.24
RARA-208ENST00000577646 PNNQ9H307 717 aaKnown RBP16.56■□□□□ 0.24
RARA-208ENST00000577646 SPG7Q9UQ90 795 aa16.56■□□□□ 0.24
RARA-208ENST00000577646 OVOS2A0A0G2JMS6 1433 aa16.55■□□□□ 0.24
RARA-208ENST00000577646 BCL9O00512 1426 aa16.55■□□□□ 0.24
RARA-208ENST00000577646 TNS2Q63HR2 1409 aa16.55■□□□□ 0.24
RARA-208ENST00000577646 BAG6P46379 1132 aa16.55■□□□□ 0.24
RARA-208ENST00000577646 RGPD1P0DJD0 1748 aa16.54■□□□□ 0.24
RARA-208ENST00000577646 FCHSD2O94868 740 aa16.54■□□□□ 0.24
RARA-208ENST00000577646 SULT6B1Q6IMI4 303 aa16.54■□□□□ 0.24
RARA-208ENST00000577646 DEFB132Q7Z7B7 95 aa16.54■□□□□ 0.24
RARA-208ENST00000577646 RGPD2P0DJD1 1756 aa16.54■□□□□ 0.24
RARA-208ENST00000577646 PLEKHO1Q53GL0 409 aaPredicted RBP16.53■□□□□ 0.24
RARA-208ENST00000577646 USHBP1Q8N6Y0 703 aa16.53■□□□□ 0.24
RARA-208ENST00000577646 U2SURPO15042 1029 aaKnown RBP16.52■□□□□ 0.24
RARA-208ENST00000577646 LRRC37A3O60309 1634 aa16.52■□□□□ 0.23
RARA-208ENST00000577646 PCDH11XQ9BZA7 1347 aa16.51■□□□□ 0.23
RARA-208ENST00000577646 PCDH11YQ9BZA8 1340 aa16.51■□□□□ 0.23
RARA-208ENST00000577646 MEGF6O75095 1541 aa16.51■□□□□ 0.23
RARA-208ENST00000577646 U2AF1L5P0DN76 240 aaPredicted RBP16.5■□□□□ 0.23
RARA-208ENST00000577646 U2AF1Q01081 240 aaKnown RBP eCLIP16.5■□□□□ 0.23
RARA-208ENST00000577646 MARCH10Q8NA82 808 aaPredicted RBP16.5■□□□□ 0.23
RARA-208ENST00000577646 TRIM37O94972 964 aa16.49■□□□□ 0.23
RARA-208ENST00000577646 HSP90AB1P08238 724 aaKnown RBP16.49■□□□□ 0.23
RARA-208ENST00000577646 NEFMP07197 916 aa16.48■□□□□ 0.23
RARA-208ENST00000577646 NKX1-1Q15270 411 aaPredicted RBP16.48■□□□□ 0.23
RARA-208ENST00000577646 IFNL2Q8IZJ0 200 aa16.48■□□□□ 0.23
RARA-208ENST00000577646 HMOX1P09601 288 aa16.47■□□□□ 0.23
RARA-208ENST00000577646 EN1Q05925 392 aaPredicted RBP16.47■□□□□ 0.23
RARA-208ENST00000577646 AEBP1Q8IUX7 1158 aa16.47■□□□□ 0.23
RARA-208ENST00000577646 DDX54Q8TDD1 881 aaKnown RBP16.47■□□□□ 0.23
RARA-208ENST00000577646 PKD1L3Q7Z443 1732 aa16.47■□□□□ 0.23
RARA-208ENST00000577646 APBA3O96018 575 aa16.46■□□□□ 0.23
RARA-208ENST00000577646 WDR43Q15061 677 aaKnown RBP eCLIP16.46■□□□□ 0.23
RARA-208ENST00000577646 RSPH6AQ9H0K4 717 aa16.46■□□□□ 0.23
RARA-208ENST00000577646 DIEXFQ68CQ4 756 aaKnown RBP16.45■□□□□ 0.22
RARA-208ENST00000577646 GAS2L2Q8NHY3 880 aa16.45■□□□□ 0.22
RARA-208ENST00000577646 CYP27B1O15528 508 aa16.44■□□□□ 0.22
RARA-208ENST00000577646 PHKG2P15735 406 aa16.44■□□□□ 0.22
RARA-208ENST00000577646 C1orf141Q5JVX7 400 aa16.44■□□□□ 0.22
RARA-208ENST00000577646 BCL11BQ9C0K0 894 aaPredicted RBP16.44■□□□□ 0.22
RARA-208ENST00000577646 PRKAR2BP31323 418 aa16.43■□□□□ 0.22
RARA-208ENST00000577646 AKAP4Q5JQC9 854 aa16.43■□□□□ 0.22
RARA-208ENST00000577646 ZNF530Q6P9A1 599 aaPredicted RBP16.43■□□□□ 0.22
RARA-208ENST00000577646 DCAF5Q96JK2 942 aa16.43■□□□□ 0.22
RARA-208ENST00000577646 CCER2I3L3R5 266 aa16.42■□□□□ 0.22
RARA-208ENST00000577646 HMGB2P26583 209 aaKnown RBP16.42■□□□□ 0.22
RARA-208ENST00000577646 ERVV-2B6SEH9 535 aa16.41■□□□□ 0.22
RARA-208ENST00000577646 HTATSF1O43719 755 aaKnown RBP16.41■□□□□ 0.22
RARA-208ENST00000577646 SHANK3Q9BYB0 1731 aa16.4■□□□□ 0.22
RARA-208ENST00000577646 EZH2Q15910 746 aaKnown RBP16.4■□□□□ 0.22
RARA-208ENST00000577646 MTHFSDQ2M296 383 aaKnown RBP16.4■□□□□ 0.22
RARA-208ENST00000577646 PLEKHF1Q96S99 279 aa16.4■□□□□ 0.22
RARA-208ENST00000577646 MRS2Q9HD23 443 aa16.4■□□□□ 0.22
RARA-208ENST00000577646 PNISRQ8TF01 805 aaKnown RBP16.39■□□□□ 0.21
RARA-208ENST00000577646 CAMKK2Q96RR4 588 aa16.39■□□□□ 0.21
RARA-208ENST00000577646 MAPK8IP3Q9UPT6 1336 aa16.39■□□□□ 0.21
RARA-208ENST00000577646 TNS1Q9HBL0 1735 aaKnown RBP16.39■□□□□ 0.21
RARA-208ENST00000577646 GNAT3A8MTJ3 354 aa16.38■□□□□ 0.21
RARA-208ENST00000577646 PLSCR1O15162 318 aa16.38■□□□□ 0.21
RARA-208ENST00000577646 RUNDC1Q96C34 613 aa16.38■□□□□ 0.21
RARA-208ENST00000577646 PHACTR3Q96KR7 559 aa16.38■□□□□ 0.21
RARA-208ENST00000577646 ADAMTS8Q9UP79 889 aa16.38■□□□□ 0.21
RARA-208ENST00000577646 SBF2Q86WG5 1849 aa16.36■□□□□ 0.21
RARA-208ENST00000577646 PSDA5PKW4 1024 aaPredicted RBP16.36■□□□□ 0.21
RARA-208ENST00000577646 PRIM1P49642 420 aaKnown RBP16.36■□□□□ 0.21
RARA-208ENST00000577646 NBPF14Q5TI25 921 aa16.36■□□□□ 0.21
RARA-208ENST00000577646 NHSQ6T4R5 1651 aa16.36■□□□□ 0.21
RARA-208ENST00000577646 NFE2L2Q16236 605 aa16.35■□□□□ 0.21
RARA-208ENST00000577646 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
RARA-208ENST00000577646 MAP3K5Q99683 1374 aa16.35■□□□□ 0.21
RARA-208ENST00000577646 LMOD3Q0VAK6 560 aa16.34■□□□□ 0.21
RARA-208ENST00000577646 R3HDM1Q15032 1099 aaKnown RBP16.34■□□□□ 0.21
RARA-208ENST00000577646 RTF1Q92541 710 aaKnown RBP16.34■□□□□ 0.21
RARA-208ENST00000577646 SMARCC1Q92922 1105 aaPredicted RBP16.34■□□□□ 0.21
RARA-208ENST00000577646 TMOD3Q9NYL9 352 aa16.34■□□□□ 0.21
RARA-208ENST00000577646 RNMTO43148 476 aaKnown RBP16.33■□□□□ 0.2
RARA-208ENST00000577646 KCNQ2O43526 872 aa16.33■□□□□ 0.2
RARA-208ENST00000577646 CABP4P57796 275 aa16.33■□□□□ 0.2
RARA-208ENST00000577646 CCDC184Q52MB2 194 aa16.33■□□□□ 0.2
RARA-208ENST00000577646 NGEFQ8N5V2 710 aa16.33■□□□□ 0.2
RARA-208ENST00000577646 ACSBG1Q96GR2 724 aa16.33■□□□□ 0.2
RARA-208ENST00000577646 LRP5O75197 1615 aa16.32■□□□□ 0.2
RARA-208ENST00000577646 MPRIPQ6WCQ1 1025 aa16.32■□□□□ 0.2
RARA-208ENST00000577646 SYTL4Q96C24 671 aaPredicted RBP16.32■□□□□ 0.2
RARA-208ENST00000577646 ADAMTS7Q9UKP4 1686 aa16.31■□□□□ 0.2
RARA-208ENST00000577646 SLC52A2Q9HAB3 445 aa16.31■□□□□ 0.2
RARA-208ENST00000577646 RGPD3A6NKT7 1758 aaPredicted RBP16.31■□□□□ 0.2
RARA-208ENST00000577646 RGPD4Q7Z3J3 1758 aa16.31■□□□□ 0.2
RARA-208ENST00000577646 KDM6AO15550 1401 aaPredicted RBP16.3■□□□□ 0.2
RARA-208ENST00000577646 CEMIPQ8WUJ3 1361 aa16.3■□□□□ 0.2
RARA-208ENST00000577646 TMPOP42166 694 aaKnown RBP16.3■□□□□ 0.2
RARA-208ENST00000577646 TEFQ10587 303 aa16.3■□□□□ 0.2
RARA-208ENST00000577646 PIGBQ92521 554 aa16.3■□□□□ 0.2
RARA-208ENST00000577646 DOT1LQ8TEK3 1739 aa16.3■□□□□ 0.2
RARA-208ENST00000577646 SCN11AQ9UI33 1791 aa16.29■□□□□ 0.2
RARA-208ENST00000577646 SLC27A3Q5K4L6 730 aa16.29■□□□□ 0.2
RARA-208ENST00000577646 IL17REQ8NFR9 667 aa16.29■□□□□ 0.2
RARA-208ENST00000577646 LGR6Q9HBX8 967 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms