RNA–Protein interactions for RNA: ENST00000577632.1

CDRT15P1-201, Transcript of CMT1A duplicated region transcript 15 pseudogene 1, humanhuman

BASIC

Gene CDRT15P1, Length 564 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15P1-201ENST00000577632 TAF1LQ8IZX4 1826 aa13.8□□□□□ -0.2
CDRT15P1-201ENST00000577632 ZNF526Q8TF50 670 aaPredicted RBP13.78□□□□□ -0.2
CDRT15P1-201ENST00000577632 GRIN3BO60391 1043 aa13.77□□□□□ -0.21
CDRT15P1-201ENST00000577632 ERBB3P21860 1342 aa13.77□□□□□ -0.21
CDRT15P1-201ENST00000577632 TMF1P82094 1093 aa13.77□□□□□ -0.21
CDRT15P1-201ENST00000577632 GPBP1L1Q9HC44 474 aaPredicted RBP13.77□□□□□ -0.21
CDRT15P1-201ENST00000577632 C5P01031 1676 aa13.76□□□□□ -0.21
CDRT15P1-201ENST00000577632 NSD2O96028 1365 aa13.76□□□□□ -0.21
CDRT15P1-201ENST00000577632 ST20-MTHFSA0A0A6YYL1 179 aa13.76□□□□□ -0.21
CDRT15P1-201ENST00000577632 PCGF6Q9BYE7 350 aa13.76□□□□□ -0.21
CDRT15P1-201ENST00000577632 TFCP2L1Q9NZI6 479 aa13.76□□□□□ -0.21
CDRT15P1-201ENST00000577632 EDC4Q6P2E9 1401 aaKnown RBP13.75□□□□□ -0.21
CDRT15P1-201ENST00000577632 IL2RBP14784 551 aa13.75□□□□□ -0.21
CDRT15P1-201ENST00000577632 SLC27A3Q5K4L6 730 aa13.75□□□□□ -0.21
CDRT15P1-201ENST00000577632 COL23A1Q86Y22 540 aaPredicted RBP13.75□□□□□ -0.21
CDRT15P1-201ENST00000577632 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.75□□□□□ -0.21
CDRT15P1-201ENST00000577632 USP31Q70CQ4 1352 aa13.74□□□□□ -0.21
CDRT15P1-201ENST00000577632 TOGARAM1Q9Y4F4 1720 aa13.74□□□□□ -0.21
CDRT15P1-201ENST00000577632 MSL1Q68DK7 614 aa13.74□□□□□ -0.21
CDRT15P1-201ENST00000577632 SLC12A5Q9H2X9 1139 aa13.74□□□□□ -0.21
CDRT15P1-201ENST00000577632 NLRP2Q9NX02 1062 aa13.74□□□□□ -0.21
CDRT15P1-201ENST00000577632 FAM208AQ9UK61 1670 aaKnown RBP13.74□□□□□ -0.21
CDRT15P1-201ENST00000577632 KIF3CO14782 793 aa13.73□□□□□ -0.21
CDRT15P1-201ENST00000577632 DNAJC5GQ8N7S2 189 aa13.73□□□□□ -0.21
CDRT15P1-201ENST00000577632 WDR90Q96KV7 1748 aa13.73□□□□□ -0.21
CDRT15P1-201ENST00000577632 USP47Q96K76 1375 aa13.72□□□□□ -0.21
CDRT15P1-201ENST00000577632 PRIM1P49642 420 aaKnown RBP13.71□□□□□ -0.21
CDRT15P1-201ENST00000577632 COG3Q96JB2 828 aa13.71□□□□□ -0.21
CDRT15P1-201ENST00000577632 TESK2Q96S53 571 aa13.71□□□□□ -0.21
CDRT15P1-201ENST00000577632 UBR3Q6ZT12 1888 aa13.71□□□□□ -0.21
CDRT15P1-201ENST00000577632 KIAA1551Q9HCM1 1747 aa13.7□□□□□ -0.22
CDRT15P1-201ENST00000577632 DDX54Q8TDD1 881 aaKnown RBP13.7□□□□□ -0.22
CDRT15P1-201ENST00000577632 ANKRD24Q8TF21 1146 aa13.7□□□□□ -0.22
CDRT15P1-201ENST00000577632 WWC3Q9ULE0 1092 aa13.7□□□□□ -0.22
CDRT15P1-201ENST00000577632 A0A1W2PP64 1363 aa13.7□□□□□ -0.22
CDRT15P1-201ENST00000577632 CD163L1Q9NR16 1453 aa13.69□□□□□ -0.22
CDRT15P1-201ENST00000577632 NME9Q86XW9 330 aa13.69□□□□□ -0.22
CDRT15P1-201ENST00000577632 CCER1Q8TC90 406 aaPredicted RBP13.69□□□□□ -0.22
CDRT15P1-201ENST00000577632 ANKRD36BQ8N2N9 1353 aa13.69□□□□□ -0.22
CDRT15P1-201ENST00000577632 ITGB4P16144 1822 aa13.69□□□□□ -0.22
CDRT15P1-201ENST00000577632 N4BP2Q86UW6 1770 aaPredicted RBP13.68□□□□□ -0.22
CDRT15P1-201ENST00000577632 AMIGO3Q86WK7 504 aa13.68□□□□□ -0.22
CDRT15P1-201ENST00000577632 CD2APQ9Y5K6 639 aa13.68□□□□□ -0.22
CDRT15P1-201ENST00000577632 CICQ96RK0 1608 aaPredicted RBP13.68□□□□□ -0.22
CDRT15P1-201ENST00000577632 MSH5O43196 834 aa13.67□□□□□ -0.22
CDRT15P1-201ENST00000577632 COL13A1Q5TAT6 717 aaPredicted RBP13.67□□□□□ -0.22
CDRT15P1-201ENST00000577632 SYTL4Q96C24 671 aaPredicted RBP13.67□□□□□ -0.22
CDRT15P1-201ENST00000577632 KIF13BQ9NQT8 1826 aa13.67□□□□□ -0.22
CDRT15P1-201ENST00000577632 CCNL1Q9UK58 526 aaPredicted RBP13.66□□□□□ -0.22
CDRT15P1-201ENST00000577632 C4BP0C0L5 1744 aa13.66□□□□□ -0.22
CDRT15P1-201ENST00000577632 SMIM5Q71RC9 77 aa13.65□□□□□ -0.22
CDRT15P1-201ENST00000577632 BRCA1P38398 1863 aaKnown RBP13.65□□□□□ -0.22
CDRT15P1-201ENST00000577632 IGSF1Q8N6C5 1336 aa13.64□□□□□ -0.23
CDRT15P1-201ENST00000577632 MEGF6O75095 1541 aa13.64□□□□□ -0.23
CDRT15P1-201ENST00000577632 AMPHP49418 695 aa13.64□□□□□ -0.23
CDRT15P1-201ENST00000577632 APLP1P51693 650 aa13.64□□□□□ -0.23
CDRT15P1-201ENST00000577632 MAP2P11137 1827 aaKnown RBP13.64□□□□□ -0.23
CDRT15P1-201ENST00000577632 HTRA3P83110 453 aa13.63□□□□□ -0.23
CDRT15P1-201ENST00000577632 IP6K1Q92551 441 aa13.63□□□□□ -0.23
CDRT15P1-201ENST00000577632 CAPN15O75808 1086 aa13.62□□□□□ -0.23
CDRT15P1-201ENST00000577632 EIF4G2P78344 907 aaKnown RBP eCLIP13.61□□□□□ -0.23
CDRT15P1-201ENST00000577632 LTV1Q96GA3 475 aaPredicted RBP13.61□□□□□ -0.23
CDRT15P1-201ENST00000577632 SMG6Q86US8 1419 aaKnown RBP13.6□□□□□ -0.23
CDRT15P1-201ENST00000577632 RTL1A6NKG5 1358 aa13.59□□□□□ -0.23
CDRT15P1-201ENST00000577632 TOMM70O94826 608 aa13.59□□□□□ -0.23
CDRT15P1-201ENST00000577632 FBLN1P23142 703 aa13.59□□□□□ -0.23
CDRT15P1-201ENST00000577632 PKD1L3Q7Z443 1732 aa13.59□□□□□ -0.23
CDRT15P1-201ENST00000577632 FYB1O15117 783 aa13.58□□□□□ -0.24
CDRT15P1-201ENST00000577632 ZCRB1Q8TBF4 217 aaKnown RBP13.58□□□□□ -0.24
CDRT15P1-201ENST00000577632 NMRK2Q9NPI5 230 aa13.58□□□□□ -0.24
CDRT15P1-201ENST00000577632 SBF1O95248 1867 aa13.58□□□□□ -0.24
CDRT15P1-201ENST00000577632 KIF24Q5T7B8 1368 aa13.58□□□□□ -0.24
CDRT15P1-201ENST00000577632 ARFGEF1Q9Y6D6 1849 aa13.57□□□□□ -0.24
CDRT15P1-201ENST00000577632 HOXC9P31274 260 aa13.57□□□□□ -0.24
CDRT15P1-201ENST00000577632 JMYQ8N9B5 988 aa13.57□□□□□ -0.24
CDRT15P1-201ENST00000577632 GGNBP2Q9H3C7 697 aa13.57□□□□□ -0.24
CDRT15P1-201ENST00000577632 CGNL1Q0VF96 1302 aa13.57□□□□□ -0.24
CDRT15P1-201ENST00000577632 MAP3K19Q56UN5 1328 aa13.57□□□□□ -0.24
CDRT15P1-201ENST00000577632 PXDNLA1KZ92 1463 aa13.56□□□□□ -0.24
CDRT15P1-201ENST00000577632 KLRG1Q96E93 195 aa13.56□□□□□ -0.24
CDRT15P1-201ENST00000577632 POLR3GLQ9BT43 218 aa13.56□□□□□ -0.24
CDRT15P1-201ENST00000577632 HMGB2P26583 209 aaKnown RBP13.55□□□□□ -0.24
CDRT15P1-201ENST00000577632 PALLDQ8WX93 1383 aa13.55□□□□□ -0.24
CDRT15P1-201ENST00000577632 PHF14O94880 888 aa13.54□□□□□ -0.24
CDRT15P1-201ENST00000577632 PRELPP51888 382 aa13.54□□□□□ -0.24
CDRT15P1-201ENST00000577632 NBPF6Q5VWK0 638 aa13.53□□□□□ -0.24
CDRT15P1-201ENST00000577632 USHBP1Q8N6Y0 703 aa13.53□□□□□ -0.24
CDRT15P1-201ENST00000577632 FLAD1Q8NFF5 587 aa13.53□□□□□ -0.24
CDRT15P1-201ENST00000577632 RAPGEF4Q8WZA2 1011 aa13.53□□□□□ -0.24
CDRT15P1-201ENST00000577632 NBPF4Q96M43 638 aa13.53□□□□□ -0.24
CDRT15P1-201ENST00000577632 FLT4P35916 1363 aa13.53□□□□□ -0.24
CDRT15P1-201ENST00000577632 NSD3Q9BZ95 1437 aa13.53□□□□□ -0.24
CDRT15P1-201ENST00000577632 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.52□□□□□ -0.25
CDRT15P1-201ENST00000577632 RRS1Q15050 365 aaKnown RBP13.52□□□□□ -0.25
CDRT15P1-201ENST00000577632 TNS4Q8IZW8 715 aa13.52□□□□□ -0.25
CDRT15P1-201ENST00000577632 KIF20BQ96Q89 1820 aa13.51□□□□□ -0.25
CDRT15P1-201ENST00000577632 INSRP06213 1382 aa13.51□□□□□ -0.25
CDRT15P1-201ENST00000577632 CCDC88AQ3V6T2 1871 aa13.5□□□□□ -0.25
CDRT15P1-201ENST00000577632 TNRC6CQ9HCJ0 1690 aaKnown RBP13.5□□□□□ -0.25
CDRT15P1-201ENST00000577632 HSPA5P11021 654 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms