RNA–Protein interactions for RNA: ENST00000577589.1

CUEDC1-205, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-205ENST00000577589 RGPD2P0DJD1 1756 aa18.25■□□□□ 0.51
CUEDC1-205ENST00000577589 ANKRD24Q8TF21 1146 aa18.25■□□□□ 0.51
CUEDC1-205ENST00000577589 CD163L1Q9NR16 1453 aa18.25■□□□□ 0.51
CUEDC1-205ENST00000577589 WDR90Q96KV7 1748 aa18.24■□□□□ 0.51
CUEDC1-205ENST00000577589 KTN1Q86UP2 1357 aaKnown RBP18.23■□□□□ 0.51
CUEDC1-205ENST00000577589 ZNF692Q9BU19 519 aaPredicted RBP18.23■□□□□ 0.51
CUEDC1-205ENST00000577589 CD2APQ9Y5K6 639 aa18.23■□□□□ 0.51
CUEDC1-205ENST00000577589 EVC2Q86UK5 1308 aa18.23■□□□□ 0.51
CUEDC1-205ENST00000577589 SBNO2Q9Y2G9 1366 aa18.22■□□□□ 0.51
CUEDC1-205ENST00000577589 PRIM1P49642 420 aaKnown RBP18.22■□□□□ 0.51
CUEDC1-205ENST00000577589 KIAA1551Q9HCM1 1747 aa18.22■□□□□ 0.51
CUEDC1-205ENST00000577589 DDX54Q8TDD1 881 aaKnown RBP18.21■□□□□ 0.51
CUEDC1-205ENST00000577589 MEGF6O75095 1541 aa18.21■□□□□ 0.51
CUEDC1-205ENST00000577589 UBR3Q6ZT12 1888 aa18.2■□□□□ 0.5
CUEDC1-205ENST00000577589 NME9Q86XW9 330 aa18.2■□□□□ 0.5
CUEDC1-205ENST00000577589 CCNL1Q9UK58 526 aaPredicted RBP18.2■□□□□ 0.5
CUEDC1-205ENST00000577589 AMIGO3Q86WK7 504 aa18.19■□□□□ 0.5
CUEDC1-205ENST00000577589 APLP1P51693 650 aa18.18■□□□□ 0.5
CUEDC1-205ENST00000577589 SYTL4Q96C24 671 aaPredicted RBP18.18■□□□□ 0.5
CUEDC1-205ENST00000577589 WWC3Q9ULE0 1092 aa18.18■□□□□ 0.5
CUEDC1-205ENST00000577589 C4BP0C0L5 1744 aa18.18■□□□□ 0.5
CUEDC1-205ENST00000577589 MSH5O43196 834 aa18.17■□□□□ 0.5
CUEDC1-205ENST00000577589 COL13A1Q5TAT6 717 aaPredicted RBP18.17■□□□□ 0.5
CUEDC1-205ENST00000577589 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.17■□□□□ 0.5
CUEDC1-205ENST00000577589 IGSF1Q8N6C5 1336 aa18.17■□□□□ 0.5
CUEDC1-205ENST00000577589 KIF13BQ9NQT8 1826 aa18.15■□□□□ 0.5
CUEDC1-205ENST00000577589 USP47Q96K76 1375 aa18.12■□□□□ 0.49
CUEDC1-205ENST00000577589 MAP2P11137 1827 aaKnown RBP18.12■□□□□ 0.49
CUEDC1-205ENST00000577589 SMIM5Q71RC9 77 aa18.11■□□□□ 0.49
CUEDC1-205ENST00000577589 IP6K1Q92551 441 aa18.11■□□□□ 0.49
CUEDC1-205ENST00000577589 N4BP2Q86UW6 1770 aaPredicted RBP18.11■□□□□ 0.49
CUEDC1-205ENST00000577589 ITGB4P16144 1822 aa18.11■□□□□ 0.49
CUEDC1-205ENST00000577589 BRCA1P38398 1863 aaKnown RBP18.1■□□□□ 0.49
CUEDC1-205ENST00000577589 EDC4Q6P2E9 1401 aaKnown RBP18.1■□□□□ 0.49
CUEDC1-205ENST00000577589 HTRA3P83110 453 aa18.1■□□□□ 0.49
CUEDC1-205ENST00000577589 LTV1Q96GA3 475 aaPredicted RBP18.1■□□□□ 0.49
CUEDC1-205ENST00000577589 PXDNLA1KZ92 1463 aa18.09■□□□□ 0.49
CUEDC1-205ENST00000577589 CAPN15O75808 1086 aa18.09■□□□□ 0.49
CUEDC1-205ENST00000577589 TOMM70O94826 608 aa18.08■□□□□ 0.48
CUEDC1-205ENST00000577589 JMYQ8N9B5 988 aa18.08■□□□□ 0.48
CUEDC1-205ENST00000577589 ZCRB1Q8TBF4 217 aaKnown RBP18.08■□□□□ 0.48
CUEDC1-205ENST00000577589 NMRK2Q9NPI5 230 aa18.08■□□□□ 0.48
CUEDC1-205ENST00000577589 PALLDQ8WX93 1383 aa18.07■□□□□ 0.48
CUEDC1-205ENST00000577589 PKD1L3Q7Z443 1732 aa18.06■□□□□ 0.48
CUEDC1-205ENST00000577589 A0A1W2PP64 1363 aa18.06■□□□□ 0.48
CUEDC1-205ENST00000577589 KLRG1Q96E93 195 aa18.06■□□□□ 0.48
CUEDC1-205ENST00000577589 MAP3K19Q56UN5 1328 aa18.04■□□□□ 0.48
CUEDC1-205ENST00000577589 PRELPP51888 382 aa18.04■□□□□ 0.48
CUEDC1-205ENST00000577589 FLAD1Q8NFF5 587 aa18.04■□□□□ 0.48
CUEDC1-205ENST00000577589 FBLN1P23142 703 aa18.03■□□□□ 0.48
CUEDC1-205ENST00000577589 HOXC9P31274 260 aa18.03■□□□□ 0.48
CUEDC1-205ENST00000577589 L3MBTL2Q969R5 705 aa18.02■□□□□ 0.48
CUEDC1-205ENST00000577589 ROCK2O75116 1388 aaKnown RBP18.02■□□□□ 0.47
CUEDC1-205ENST00000577589 ARFGEF1Q9Y6D6 1849 aa18.01■□□□□ 0.47
CUEDC1-205ENST00000577589 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.01■□□□□ 0.47
CUEDC1-205ENST00000577589 SLC12A5Q9H2X9 1139 aa18.01■□□□□ 0.47
CUEDC1-205ENST00000577589 C10orf71Q711Q0 1435 aa18■□□□□ 0.47
CUEDC1-205ENST00000577589 PHF14O94880 888 aa18■□□□□ 0.47
CUEDC1-205ENST00000577589 NBPF6Q5VWK0 638 aa18■□□□□ 0.47
CUEDC1-205ENST00000577589 TNS4Q8IZW8 715 aa18■□□□□ 0.47
CUEDC1-205ENST00000577589 USHBP1Q8N6Y0 703 aa18■□□□□ 0.47
CUEDC1-205ENST00000577589 RBM46Q8TBY0 533 aaKnown RBP18■□□□□ 0.47
CUEDC1-205ENST00000577589 NBPF4Q96M43 638 aa18■□□□□ 0.47
CUEDC1-205ENST00000577589 LINC00116Q8NCU8 138 aa17.98■□□□□ 0.47
CUEDC1-205ENST00000577589 AK7Q96M32 723 aa17.98■□□□□ 0.47
CUEDC1-205ENST00000577589 KCPQ6ZWJ8 1503 aa17.98■□□□□ 0.47
CUEDC1-205ENST00000577589 NSD3Q9BZ95 1437 aa17.98■□□□□ 0.47
CUEDC1-205ENST00000577589 TNRC6CQ9HCJ0 1690 aaKnown RBP17.97■□□□□ 0.47
CUEDC1-205ENST00000577589 RTL1A6NKG5 1358 aa17.96■□□□□ 0.47
CUEDC1-205ENST00000577589 C4AP0C0L4 1744 aa17.96■□□□□ 0.47
CUEDC1-205ENST00000577589 CYP27B1O15528 508 aa17.96■□□□□ 0.47
CUEDC1-205ENST00000577589 SSFA2P28290 1259 aa17.96■□□□□ 0.47
CUEDC1-205ENST00000577589 HDGFL2Q7Z4V5 671 aaPredicted RBP17.96■□□□□ 0.47
CUEDC1-205ENST00000577589 CGNL1Q0VF96 1302 aa17.96■□□□□ 0.46
CUEDC1-205ENST00000577589 SBF1O95248 1867 aa17.95■□□□□ 0.46
CUEDC1-205ENST00000577589 MPRIPQ6WCQ1 1025 aa17.95■□□□□ 0.46
CUEDC1-205ENST00000577589 TMC1Q8TDI8 760 aa17.95■□□□□ 0.46
CUEDC1-205ENST00000577589 MMP10P09238 476 aa17.94■□□□□ 0.46
CUEDC1-205ENST00000577589 BCS1LQ9Y276 419 aa17.94■□□□□ 0.46
CUEDC1-205ENST00000577589 PCDH11XQ9BZA7 1347 aa17.94■□□□□ 0.46
CUEDC1-205ENST00000577589 PCDH11YQ9BZA8 1340 aa17.94■□□□□ 0.46
CUEDC1-205ENST00000577589 A0A0G2JLW4 131 aa17.93■□□□□ 0.46
CUEDC1-205ENST00000577589 FSTL1Q12841 308 aa17.92■□□□□ 0.46
CUEDC1-205ENST00000577589 ITPK1Q13572 414 aa17.92■□□□□ 0.46
CUEDC1-205ENST00000577589 PIGBQ92521 554 aa17.92■□□□□ 0.46
CUEDC1-205ENST00000577589 PLEKHG2Q9H7P9 1386 aa17.91■□□□□ 0.46
CUEDC1-205ENST00000577589 AMPHP49418 695 aa17.91■□□□□ 0.46
CUEDC1-205ENST00000577589 C9orf131Q5VYM1 1079 aa17.91■□□□□ 0.46
CUEDC1-205ENST00000577589 COL5A3P25940 1745 aaPredicted RBP17.91■□□□□ 0.46
CUEDC1-205ENST00000577589 NCAPD2Q15021 1401 aa17.9■□□□□ 0.46
CUEDC1-205ENST00000577589 DPEP1P16444 411 aa17.9■□□□□ 0.46
CUEDC1-205ENST00000577589 RRS1Q15050 365 aaKnown RBP17.9■□□□□ 0.46
CUEDC1-205ENST00000577589 ARHGAP27Q6ZUM4 889 aa17.9■□□□□ 0.46
CUEDC1-205ENST00000577589 RAPGEF4Q8WZA2 1011 aa17.9■□□□□ 0.46
CUEDC1-205ENST00000577589 SMARCC1Q92922 1105 aaPredicted RBP17.9■□□□□ 0.46
CUEDC1-205ENST00000577589 TERF2IPQ9NYB0 399 aa17.9■□□□□ 0.46
CUEDC1-205ENST00000577589 LOC102724428A0A0B4J2F2 783 aa17.89■□□□□ 0.45
CUEDC1-205ENST00000577589 GNPATO15228 680 aa17.89■□□□□ 0.45
CUEDC1-205ENST00000577589 KCNA3P22001 575 aa17.89■□□□□ 0.45
CUEDC1-205ENST00000577589 SIK1P57059 783 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms