RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 TOGARAM1Q9Y4F4 1720 aa17.54■□□□□ 0.4
SSH2-205ENST00000577483 ITGB4P16144 1822 aa17.54■□□□□ 0.4
SSH2-205ENST00000577483 USHBP1Q8N6Y0 703 aa17.53■□□□□ 0.4
SSH2-205ENST00000577483 ACSBG1Q96GR2 724 aa17.53■□□□□ 0.4
SSH2-205ENST00000577483 TUBGCP6Q96RT7 1819 aa17.51■□□□□ 0.39
SSH2-205ENST00000577483 PROM2Q8N271 834 aa17.51■□□□□ 0.39
SSH2-205ENST00000577483 PANK3Q9H999 370 aa17.51■□□□□ 0.39
SSH2-205ENST00000577483 NCAPD2Q15021 1401 aa17.51■□□□□ 0.39
SSH2-205ENST00000577483 DDX54Q8TDD1 881 aaKnown RBP17.5■□□□□ 0.39
SSH2-205ENST00000577483 ANO8Q9HCE9 1232 aaPredicted RBP17.5■□□□□ 0.39
SSH2-205ENST00000577483 QSER1Q2KHR3 1735 aa17.49■□□□□ 0.39
SSH2-205ENST00000577483 NBPF14Q5TI25 921 aa17.48■□□□□ 0.39
SSH2-205ENST00000577483 KIF7Q2M1P5 1343 aa17.48■□□□□ 0.39
SSH2-205ENST00000577483 PPM1GO15355 546 aaPredicted RBP17.47■□□□□ 0.39
SSH2-205ENST00000577483 POLKQ9UBT6 870 aa17.47■□□□□ 0.39
SSH2-205ENST00000577483 NSD2O96028 1365 aa17.47■□□□□ 0.39
SSH2-205ENST00000577483 TXNRD1Q16881 649 aa17.47■□□□□ 0.39
SSH2-205ENST00000577483 ZCRB1Q8TBF4 217 aaKnown RBP17.47■□□□□ 0.39
SSH2-205ENST00000577483 WASHC2AQ641Q2 1341 aa17.46■□□□□ 0.39
SSH2-205ENST00000577483 TNNT2P45379 298 aaPredicted RBP17.46■□□□□ 0.39
SSH2-205ENST00000577483 TAF1LQ8IZX4 1826 aa17.45■□□□□ 0.38
SSH2-205ENST00000577483 RAPGEF4Q8WZA2 1011 aa17.44■□□□□ 0.38
SSH2-205ENST00000577483 C5P01031 1676 aa17.43■□□□□ 0.38
SSH2-205ENST00000577483 TATP17735 454 aaPredicted RBP17.43■□□□□ 0.38
SSH2-205ENST00000577483 VIRMAQ69YN4 1812 aaKnown RBP17.43■□□□□ 0.38
SSH2-205ENST00000577483 PDGFDQ9GZP0 370 aaPredicted RBP17.42■□□□□ 0.38
SSH2-205ENST00000577483 EYA1Q99502 592 aa17.41■□□□□ 0.38
SSH2-205ENST00000577483 PCDH11XQ9BZA7 1347 aa17.41■□□□□ 0.38
SSH2-205ENST00000577483 PCDH11YQ9BZA8 1340 aa17.41■□□□□ 0.38
SSH2-205ENST00000577483 PRIM1P49642 420 aaKnown RBP17.4■□□□□ 0.38
SSH2-205ENST00000577483 EIF4A2Q14240 407 aaKnown RBP17.4■□□□□ 0.38
SSH2-205ENST00000577483 SYTL4Q96C24 671 aaPredicted RBP17.4■□□□□ 0.38
SSH2-205ENST00000577483 LRRC4BQ9NT99 713 aa17.39■□□□□ 0.38
SSH2-205ENST00000577483 CYP27B1O15528 508 aa17.39■□□□□ 0.37
SSH2-205ENST00000577483 AMER1Q5JTC6 1135 aaPredicted RBP17.39■□□□□ 0.37
SSH2-205ENST00000577483 KNSTRNQ9Y448 316 aa17.39■□□□□ 0.37
SSH2-205ENST00000577483 COL24A1Q17RW2 1714 aa17.39■□□□□ 0.37
SSH2-205ENST00000577483 SLC15A2Q16348 729 aa17.38■□□□□ 0.37
SSH2-205ENST00000577483 MORC1Q86VD1 984 aa17.37■□□□□ 0.37
SSH2-205ENST00000577483 STK32BQ9NY57 414 aa17.37■□□□□ 0.37
SSH2-205ENST00000577483 IGSF1Q8N6C5 1336 aa17.37■□□□□ 0.37
SSH2-205ENST00000577483 PER1O15534 1290 aaPredicted RBP17.36■□□□□ 0.37
SSH2-205ENST00000577483 ZNF827Q17R98 1081 aa17.36■□□□□ 0.37
SSH2-205ENST00000577483 KCNQ4P56696 695 aa17.35■□□□□ 0.37
SSH2-205ENST00000577483 SPON1Q9HCB6 807 aa17.34■□□□□ 0.37
SSH2-205ENST00000577483 SCN11AQ9UI33 1791 aa17.33■□□□□ 0.36
SSH2-205ENST00000577483 ZBTB7AO95365 584 aa17.32■□□□□ 0.36
SSH2-205ENST00000577483 SLC27A3Q5K4L6 730 aa17.32■□□□□ 0.36
SSH2-205ENST00000577483 UBR3Q6ZT12 1888 aa17.32■□□□□ 0.36
SSH2-205ENST00000577483 C4BP0C0L5 1744 aa17.32■□□□□ 0.36
SSH2-205ENST00000577483 SPG7Q9UQ90 795 aa17.32■□□□□ 0.36
SSH2-205ENST00000577483 PLEKHG2Q9H7P9 1386 aa17.32■□□□□ 0.36
SSH2-205ENST00000577483 NKX1-1Q15270 411 aaPredicted RBP17.31■□□□□ 0.36
SSH2-205ENST00000577483 AKT1S1Q96B36 256 aa17.31■□□□□ 0.36
SSH2-205ENST00000577483 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.31■□□□□ 0.364e-6■■■■■ 27.4
SSH2-205ENST00000577483 MPRIPQ6WCQ1 1025 aa17.3■□□□□ 0.36
SSH2-205ENST00000577483 CC2D1BQ5T0F9 858 aaKnown RBP17.29■□□□□ 0.36
SSH2-205ENST00000577483 AEBP1Q8IUX7 1158 aa17.29■□□□□ 0.36
SSH2-205ENST00000577483 CCNL1Q9UK58 526 aaPredicted RBP17.29■□□□□ 0.36
SSH2-205ENST00000577483 PALLDQ8WX93 1383 aa17.29■□□□□ 0.36
SSH2-205ENST00000577483 PHKG2P15735 406 aa17.29■□□□□ 0.36
SSH2-205ENST00000577483 PTGER2P43116 358 aa17.29■□□□□ 0.36
SSH2-205ENST00000577483 KDRP35968 1356 aa17.28■□□□□ 0.36
SSH2-205ENST00000577483 ZNF831Q5JPB2 1677 aa17.28■□□□□ 0.36
SSH2-205ENST00000577483 ATF5Q9Y2D1 282 aaPredicted RBP17.28■□□□□ 0.36
SSH2-205ENST00000577483 COL5A3P25940 1745 aaPredicted RBP17.28■□□□□ 0.36
SSH2-205ENST00000577483 COL3A1P02461 1466 aaPredicted RBP17.27■□□□□ 0.36
SSH2-205ENST00000577483 IL13P35225 146 aa17.27■□□□□ 0.36
SSH2-205ENST00000577483 IFNL2Q8IZJ0 200 aa17.27■□□□□ 0.36
SSH2-205ENST00000577483 PNPLA7Q6ZV29 1317 aa17.27■□□□□ 0.35
SSH2-205ENST00000577483 NPC1L1Q9UHC9 1359 aa17.26■□□□□ 0.35
SSH2-205ENST00000577483 KDM6AO15550 1401 aaPredicted RBP17.26■□□□□ 0.35
SSH2-205ENST00000577483 MTHFSP49914 203 aa17.26■□□□□ 0.35
SSH2-205ENST00000577483 PIGBQ92521 554 aa17.26■□□□□ 0.35
SSH2-205ENST00000577483 PPP1R1BQ9UD71 204 aaPredicted RBP17.26■□□□□ 0.35
SSH2-205ENST00000577483 SGIP1Q9BQI5 828 aa17.25■□□□□ 0.35
SSH2-205ENST00000577483 MTFR1LQ9H019 292 aa17.25■□□□□ 0.35
SSH2-205ENST00000577483 SULT6B1Q6IMI4 303 aa17.24■□□□□ 0.35
SSH2-205ENST00000577483 ADAMTS7Q9UKP4 1686 aa17.24■□□□□ 0.35
SSH2-205ENST00000577483 CNGB1Q14028 1251 aaPredicted RBP17.23■□□□□ 0.35
SSH2-205ENST00000577483 TFCP2L1Q9NZI6 479 aa17.23■□□□□ 0.35
SSH2-205ENST00000577483 TMOD3Q9NYL9 352 aa17.22■□□□□ 0.35
SSH2-205ENST00000577483 PLEKHO1Q53GL0 409 aaPredicted RBP17.21■□□□□ 0.35
SSH2-205ENST00000577483 ZNF530Q6P9A1 599 aaPredicted RBP17.21■□□□□ 0.35
SSH2-205ENST00000577483 TJP1Q07157 1748 aa17.21■□□□□ 0.35
SSH2-205ENST00000577483 CICQ96RK0 1608 aaPredicted RBP17.21■□□□□ 0.35
SSH2-205ENST00000577483 ASAP1Q9ULH1 1129 aa17.21■□□□□ 0.35
SSH2-205ENST00000577483 MYH14Q7Z406 1995 aaKnown RBP17.2■□□□□ 0.34
SSH2-205ENST00000577483 SMARCC1Q92922 1105 aaPredicted RBP17.2■□□□□ 0.34
SSH2-205ENST00000577483 AMOTQ4VCS5 1084 aa17.19■□□□□ 0.34
SSH2-205ENST00000577483 C4AP0C0L4 1744 aa17.19■□□□□ 0.34
SSH2-205ENST00000577483 SIPA1L3O60292 1781 aaPredicted RBP17.18■□□□□ 0.34
SSH2-205ENST00000577483 COL23A1Q86Y22 540 aaPredicted RBP17.18■□□□□ 0.34
SSH2-205ENST00000577483 DCAF5Q96JK2 942 aa17.18■□□□□ 0.34
SSH2-205ENST00000577483 ATG3Q9NT62 314 aa17.18■□□□□ 0.34
SSH2-205ENST00000577483 LOC102724428A0A0B4J2F2 783 aa17.18■□□□□ 0.34
SSH2-205ENST00000577483 HMOX1P09601 288 aa17.18■□□□□ 0.34
SSH2-205ENST00000577483 SIK1P57059 783 aa17.18■□□□□ 0.34
SSH2-205ENST00000577483 AMIGO3Q86WK7 504 aa17.18■□□□□ 0.34
SSH2-205ENST00000577483 SLC16A10Q8TF71 515 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms