RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 NLRP2Q9NX02 1062 aa16.28■□□□□ 0.2
TSEN54-204ENST00000577197 TRPC5Q9UL62 973 aaPredicted RBP16.28■□□□□ 0.2
TSEN54-204ENST00000577197 CT47B1P0C2W7 299 aaPredicted RBP16.27■□□□□ 0.2
TSEN54-204ENST00000577197 RIPK4P57078 832 aa16.27■□□□□ 0.2
TSEN54-204ENST00000577197 AMOTQ4VCS5 1084 aa16.27■□□□□ 0.2
TSEN54-204ENST00000577197 NBPF6Q5VWK0 638 aa16.27■□□□□ 0.2
TSEN54-204ENST00000577197 AEBP1Q8IUX7 1158 aa16.27■□□□□ 0.2
TSEN54-204ENST00000577197 PHACTR3Q96KR7 559 aa16.27■□□□□ 0.2
TSEN54-204ENST00000577197 NBPF4Q96M43 638 aa16.27■□□□□ 0.2
TSEN54-204ENST00000577197 MYH16Q9H6N6 1097 aa16.27■□□□□ 0.2
TSEN54-204ENST00000577197 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.27■□□□□ 0.2
TSEN54-204ENST00000577197 TRIM35Q9UPQ4 493 aa16.27■□□□□ 0.2
TSEN54-204ENST00000577197 ATRNO75882 1429 aa16.27■□□□□ 0.19
TSEN54-204ENST00000577197 SPATA31A5Q5VU36 1347 aa16.26■□□□□ 0.19
TSEN54-204ENST00000577197 SPATA31A7Q8IWB4 1347 aa16.26■□□□□ 0.19
TSEN54-204ENST00000577197 DUSP27Q5VZP5 1158 aa16.26■□□□□ 0.19
TSEN54-204ENST00000577197 THRAP3Q9Y2W1 955 aaKnown RBP16.26■□□□□ 0.19
TSEN54-204ENST00000577197 OVOS2A0A0G2JMS6 1433 aa16.26■□□□□ 0.19
TSEN54-204ENST00000577197 SPATA31A1Q5TZJ5 1347 aa16.25■□□□□ 0.19
TSEN54-204ENST00000577197 RGPD2P0DJD1 1756 aa16.25■□□□□ 0.19
TSEN54-204ENST00000577197 LRRC37A3O60309 1634 aa16.24■□□□□ 0.19
TSEN54-204ENST00000577197 QTRT2Q9H974 415 aaKnown RBP16.24■□□□□ 0.19
TSEN54-204ENST00000577197 CCDC9Q9Y3X0 531 aaKnown RBP16.24■□□□□ 0.19
TSEN54-204ENST00000577197 RNF123Q5XPI4 1314 aa16.23■□□□□ 0.19
TSEN54-204ENST00000577197 GJD4Q96KN9 370 aaPredicted RBP16.23■□□□□ 0.19
TSEN54-204ENST00000577197 SALL2Q9Y467 1007 aaPredicted RBP16.23■□□□□ 0.19
TSEN54-204ENST00000577197 PKD1L3Q7Z443 1732 aa16.22■□□□□ 0.19
TSEN54-204ENST00000577197 PARP4Q9UKK3 1724 aaKnown RBP16.22■□□□□ 0.19
TSEN54-204ENST00000577197 BARGINQ6ZT62 677 aa16.22■□□□□ 0.19
TSEN54-204ENST00000577197 CDCA7Q9BWT1 371 aaPredicted RBP16.22■□□□□ 0.19
TSEN54-204ENST00000577197 IFT57Q9NWB7 429 aa16.22■□□□□ 0.19
TSEN54-204ENST00000577197 BABAM1Q9NWV8 329 aa16.22■□□□□ 0.19
TSEN54-204ENST00000577197 RRP7AQ9Y3A4 280 aaKnown RBP16.22■□□□□ 0.19
TSEN54-204ENST00000577197 ADAMTS7Q9UKP4 1686 aa16.21■□□□□ 0.19
TSEN54-204ENST00000577197 NEUROD2Q15784 382 aa16.21■□□□□ 0.19
TSEN54-204ENST00000577197 PLEKHO1Q53GL0 409 aaPredicted RBP16.21■□□□□ 0.19
TSEN54-204ENST00000577197 CDCA7LQ96GN5 454 aa16.21■□□□□ 0.19
TSEN54-204ENST00000577197 USP35Q9P2H5 1018 aa16.21■□□□□ 0.19
TSEN54-204ENST00000577197 RGS17Q9UGC6 210 aaPredicted RBP16.21■□□□□ 0.19
TSEN54-204ENST00000577197 MAP3K5Q99683 1374 aa16.21■□□□□ 0.19
TSEN54-204ENST00000577197 ZNF853P0CG23 659 aa16.2■□□□□ 0.18
TSEN54-204ENST00000577197 GNAI1P63096 354 aa16.2■□□□□ 0.18
TSEN54-204ENST00000577197 MTHFSDQ2M296 383 aaKnown RBP16.2■□□□□ 0.18
TSEN54-204ENST00000577197 USHBP1Q8N6Y0 703 aa16.2■□□□□ 0.18
TSEN54-204ENST00000577197 RAPGEF4Q8WZA2 1011 aa16.2■□□□□ 0.18
TSEN54-204ENST00000577197 ZNF428Q96B54 188 aa16.2■□□□□ 0.18
TSEN54-204ENST00000577197 GLI3P10071 1580 aa16.19■□□□□ 0.18
TSEN54-204ENST00000577197 GNAT3A8MTJ3 354 aa16.19■□□□□ 0.18
TSEN54-204ENST00000577197 IL2RBP14784 551 aa16.19■□□□□ 0.18
TSEN54-204ENST00000577197 RBM6P78332 1123 aaKnown RBP16.19■□□□□ 0.18
TSEN54-204ENST00000577197 ERICH6BQ5W0A0 696 aa16.19■□□□□ 0.18
TSEN54-204ENST00000577197 CFAP44Q96MT7 982 aa16.19■□□□□ 0.18
TSEN54-204ENST00000577197 DISP2A7MBM2 1401 aa16.19■□□□□ 0.18
TSEN54-204ENST00000577197 CEMIPQ8WUJ3 1361 aa16.18■□□□□ 0.18
TSEN54-204ENST00000577197 TATP17735 454 aaPredicted RBP16.18■□□□□ 0.18
TSEN54-204ENST00000577197 RTF1Q92541 710 aaKnown RBP16.18■□□□□ 0.18
TSEN54-204ENST00000577197 ONECUT3O60422 494 aaPredicted RBP16.17■□□□□ 0.18
TSEN54-204ENST00000577197 AKAP4Q5JQC9 854 aa16.17■□□□□ 0.18
TSEN54-204ENST00000577197 SPINK5Q9NQ38 1064 aaPredicted RBP16.17■□□□□ 0.18
TSEN54-204ENST00000577197 RCAN3Q9UKA8 241 aa16.17■□□□□ 0.18
TSEN54-204ENST00000577197 RXRBP28702 533 aa16.16■□□□□ 0.18
TSEN54-204ENST00000577197 SPG7Q9UQ90 795 aa16.16■□□□□ 0.18
TSEN54-204ENST00000577197 WNK3Q9BYP7 1800 aa16.16■□□□□ 0.18
TSEN54-204ENST00000577197 SOS1Q07889 1333 aaPredicted RBP16.16■□□□□ 0.18
TSEN54-204ENST00000577197 FANCIQ9NVI1 1328 aa16.16■□□□□ 0.18
TSEN54-204ENST00000577197 MEGF6O75095 1541 aa16.15■□□□□ 0.18
TSEN54-204ENST00000577197 FAM98CQ17RN3 349 aaKnown RBP16.15■□□□□ 0.18
TSEN54-204ENST00000577197 POTEAQ6S8J7 498 aa16.15■□□□□ 0.18
TSEN54-204ENST00000577197 CHL1O00533 1208 aa16.14■□□□□ 0.17
TSEN54-204ENST00000577197 NEFLP07196 543 aa16.14■□□□□ 0.17
TSEN54-204ENST00000577197 THSD7AQ9UPZ6 1657 aa16.14■□□□□ 0.17
TSEN54-204ENST00000577197 HSP90AB1P08238 724 aaKnown RBP16.13■□□□□ 0.17
TSEN54-204ENST00000577197 EXOC5O00471 708 aa16.12■□□□□ 0.17
TSEN54-204ENST00000577197 DDB1Q16531 1140 aa16.12■□□□□ 0.17
TSEN54-204ENST00000577197 C1orf141Q5JVX7 400 aa16.12■□□□□ 0.17
TSEN54-204ENST00000577197 ZNF530Q6P9A1 599 aaPredicted RBP16.12■□□□□ 0.17
TSEN54-204ENST00000577197 ZCRB1Q8TBF4 217 aaKnown RBP16.12■□□□□ 0.17
TSEN54-204ENST00000577197 TNS2Q63HR2 1409 aa16.11■□□□□ 0.17
TSEN54-204ENST00000577197 MRC1P22897 1456 aa16.11■□□□□ 0.17
TSEN54-204ENST00000577197 SENP3-EIF4A1A0A087X0R7 540 aa16.11■□□□□ 0.17
TSEN54-204ENST00000577197 SUPT16HQ9Y5B9 1047 aaKnown RBP16.11■□□□□ 0.17
TSEN54-204ENST00000577197 SCN11AQ9UI33 1791 aa16.1■□□□□ 0.17
TSEN54-204ENST00000577197 A0A0G2JS52 829 aa16.1■□□□□ 0.17
TSEN54-204ENST00000577197 BRPF1P55201 1214 aaPredicted RBP16.1■□□□□ 0.17
TSEN54-204ENST00000577197 MYT1Q01538 1121 aa16.1■□□□□ 0.17
TSEN54-204ENST00000577197 SEPT12Q8IYM1 358 aa16.1■□□□□ 0.17
TSEN54-204ENST00000577197 IFNL2Q8IZJ0 200 aa16.1■□□□□ 0.17
TSEN54-204ENST00000577197 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.1■□□□□ 0.17
TSEN54-204ENST00000577197 PCDH11XQ9BZA7 1347 aa16.1■□□□□ 0.17
TSEN54-204ENST00000577197 PCDH11YQ9BZA8 1340 aa16.1■□□□□ 0.17
TSEN54-204ENST00000577197 SIPA1L3O60292 1781 aaPredicted RBP16.1■□□□□ 0.17
TSEN54-204ENST00000577197 VIRMAQ69YN4 1812 aaKnown RBP16.1■□□□□ 0.17
TSEN54-204ENST00000577197 ALDH1L2Q3SY69 923 aa16.09■□□□□ 0.17
TSEN54-204ENST00000577197 CHMP4AQ9BY43 222 aa16.09■□□□□ 0.17
TSEN54-204ENST00000577197 RRP1P56182 461 aaKnown RBP16.08■□□□□ 0.16
TSEN54-204ENST00000577197 TAF7Q15545 349 aaPredicted RBP16.08■□□□□ 0.16
TSEN54-204ENST00000577197 IL17REQ8NFR9 667 aa16.08■□□□□ 0.16
TSEN54-204ENST00000577197 DCAF5Q96JK2 942 aa16.08■□□□□ 0.16
TSEN54-204ENST00000577197 MBIPQ9NS73 344 aa16.08■□□□□ 0.16
TSEN54-204ENST00000577197 KDM3BQ7LBC6 1761 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms