RNA–Protein interactions for RNA: ENST00000577038.1

MMD-203, Transcript of monocyte to macrophage differentiation associated, humanhuman

TSL 2

Gene MMD, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMD-203ENST00000577038 TFCP2L1Q9NZI6 479 aa23.36■■□□□ 1.33
MMD-203ENST00000577038 GOLGB1Q14789 3259 aaKnown RBP23.35■■□□□ 1.33
MMD-203ENST00000577038 POLD1P28340 1107 aa23.34■■□□□ 1.33
MMD-203ENST00000577038 NBPF6Q5VWK0 638 aa23.33■■□□□ 1.33
MMD-203ENST00000577038 NBPF4Q96M43 638 aa23.33■■□□□ 1.33
MMD-203ENST00000577038 C1QTNF8P60827 252 aa23.32■■□□□ 1.32
MMD-203ENST00000577038 KLHL34Q8N239 644 aa23.32■■□□□ 1.32
MMD-203ENST00000577038 MEGF6O75095 1541 aa23.32■■□□□ 1.32
MMD-203ENST00000577038 NLGN2Q8NFZ4 835 aa23.31■■□□□ 1.32
MMD-203ENST00000577038 CHD4Q14839 1912 aa23.3■■□□□ 1.32
MMD-203ENST00000577038 FAM208AQ9UK61 1670 aaKnown RBP23.3■■□□□ 1.32
MMD-203ENST00000577038 FYB1O15117 783 aa23.3■■□□□ 1.32
MMD-203ENST00000577038 RRS1Q15050 365 aaKnown RBP23.3■■□□□ 1.32
MMD-203ENST00000577038 CCNL1Q9UK58 526 aaPredicted RBP23.3■■□□□ 1.32
MMD-203ENST00000577038 COL24A1Q17RW2 1714 aa23.28■■□□□ 1.32
MMD-203ENST00000577038 SLC24A1O60721 1099 aa23.28■■□□□ 1.32
MMD-203ENST00000577038 COL23A1Q86Y22 540 aaPredicted RBP23.28■■□□□ 1.32
MMD-203ENST00000577038 USHBP1Q8N6Y0 703 aa23.28■■□□□ 1.32
MMD-203ENST00000577038 QSER1Q2KHR3 1735 aa23.28■■□□□ 1.32
MMD-203ENST00000577038 GGNBP2Q9H3C7 697 aa23.27■■□□□ 1.32
MMD-203ENST00000577038 SENP3-EIF4A1A0A087X0R7 540 aa23.26■■□□□ 1.31
MMD-203ENST00000577038 PELP1Q8IZL8 1130 aaKnown RBP23.26■■□□□ 1.31
MMD-203ENST00000577038 RGPD2P0DJD1 1756 aa23.26■■□□□ 1.31
MMD-203ENST00000577038 RTL1A6NKG5 1358 aa23.26■■□□□ 1.31
MMD-203ENST00000577038 USP47Q96K76 1375 aa23.26■■□□□ 1.31
MMD-203ENST00000577038 CGNL1Q0VF96 1302 aa23.25■■□□□ 1.31
MMD-203ENST00000577038 SHANK3Q9BYB0 1731 aa23.25■■□□□ 1.31
MMD-203ENST00000577038 KIF20BQ96Q89 1820 aa23.24■■□□□ 1.31
MMD-203ENST00000577038 LY75O60449 1722 aa23.24■■□□□ 1.31
MMD-203ENST00000577038 DOT1LQ8TEK3 1739 aa23.24■■□□□ 1.31
MMD-203ENST00000577038 YBX3P16989 372 aaKnown RBP eCLIP23.23■■□□□ 1.31
MMD-203ENST00000577038 HSP90AB2PQ58FF8 381 aa23.23■■□□□ 1.31
MMD-203ENST00000577038 RAPGEF4Q8WZA2 1011 aa23.23■■□□□ 1.31
MMD-203ENST00000577038 TUBGCP6Q96RT7 1819 aa23.23■■□□□ 1.31
MMD-203ENST00000577038 MSH5O43196 834 aa23.22■■□□□ 1.31
MMD-203ENST00000577038 TATP17735 454 aaPredicted RBP23.21■■□□□ 1.31
MMD-203ENST00000577038 PCGF6Q9BYE7 350 aa23.2■■□□□ 1.3
MMD-203ENST00000577038 INSRP06213 1382 aa23.19■■□□□ 1.3
MMD-203ENST00000577038 CYP27B1O15528 508 aa23.19■■□□□ 1.3
MMD-203ENST00000577038 TMF1P82094 1093 aa23.19■■□□□ 1.3
MMD-203ENST00000577038 MSL1Q68DK7 614 aa23.19■■□□□ 1.3
MMD-203ENST00000577038 GRIN3BO60391 1043 aa23.18■■□□□ 1.3
MMD-203ENST00000577038 GIGYF1O75420 1035 aaPredicted RBP23.17■■□□□ 1.3
MMD-203ENST00000577038 MPRIPQ6WCQ1 1025 aa23.16■■□□□ 1.3
MMD-203ENST00000577038 CEP350Q5VT06 3117 aa23.16■■□□□ 1.3
MMD-203ENST00000577038 PCDH11XQ9BZA7 1347 aa23.15■■□□□ 1.3
MMD-203ENST00000577038 PCDH11YQ9BZA8 1340 aa23.15■■□□□ 1.3
MMD-203ENST00000577038 SMG6Q86US8 1419 aaKnown RBP23.15■■□□□ 1.3
MMD-203ENST00000577038 PALLDQ8WX93 1383 aa23.14■■□□□ 1.3
MMD-203ENST00000577038 FLAD1Q8NFF5 587 aa23.14■■□□□ 1.29
MMD-203ENST00000577038 CARD14Q9BXL6 1004 aa23.14■■□□□ 1.29
MMD-203ENST00000577038 CD2APQ9Y5K6 639 aa23.14■■□□□ 1.29
MMD-203ENST00000577038 FLT4P35916 1363 aa23.14■■□□□ 1.29
MMD-203ENST00000577038 AMIGO3Q86WK7 504 aa23.13■■□□□ 1.29
MMD-203ENST00000577038 KIF24Q5T7B8 1368 aa23.13■■□□□ 1.29
MMD-203ENST00000577038 EMILIN1Q9Y6C2 1016 aa23.12■■□□□ 1.29
MMD-203ENST00000577038 CLSPNQ9HAW4 1339 aa23.1■■□□□ 1.29
MMD-203ENST00000577038 HMGB2P26583 209 aaKnown RBP23.1■■□□□ 1.29
MMD-203ENST00000577038 NKX1-1Q15270 411 aaPredicted RBP23.1■■□□□ 1.29
MMD-203ENST00000577038 SMIM5Q71RC9 77 aa23.1■■□□□ 1.29
MMD-203ENST00000577038 PIGBQ92521 554 aa23.1■■□□□ 1.29
MMD-203ENST00000577038 TIMELESSQ9UNS1 1208 aa23.1■■□□□ 1.29
MMD-203ENST00000577038 SMARCC1Q92922 1105 aaPredicted RBP23.09■■□□□ 1.29
MMD-203ENST00000577038 CDCA8Q53HL2 280 aa23.07■■□□□ 1.28
MMD-203ENST00000577038 C5P01031 1676 aa23.06■■□□□ 1.28
MMD-203ENST00000577038 AK7Q96M32 723 aa23.06■■□□□ 1.28
MMD-203ENST00000577038 NCAPD2Q15021 1401 aa23.06■■□□□ 1.28
MMD-203ENST00000577038 MAP2P11137 1827 aaKnown RBP23.05■■□□□ 1.28
MMD-203ENST00000577038 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.04■■□□□ 1.28
MMD-203ENST00000577038 ATP10DQ9P241 1426 aa23.04■■□□□ 1.28
MMD-203ENST00000577038 WASHC2AQ641Q2 1341 aa23.04■■□□□ 1.28
MMD-203ENST00000577038 PPM1GO15355 546 aaPredicted RBP23.03■■□□□ 1.28
MMD-203ENST00000577038 PHF14O94880 888 aa23.03■■□□□ 1.28
MMD-203ENST00000577038 LINC00116Q8NCU8 138 aa23.03■■□□□ 1.28
MMD-203ENST00000577038 EYA1Q99502 592 aa23.03■■□□□ 1.28
MMD-203ENST00000577038 SPG7Q9UQ90 795 aa23.03■■□□□ 1.28
MMD-203ENST00000577038 TAF1LQ8IZX4 1826 aa23.03■■□□□ 1.28
MMD-203ENST00000577038 TOGARAM1Q9Y4F4 1720 aa23.02■■□□□ 1.28
MMD-203ENST00000577038 NSD3Q9BZ95 1437 aa23.02■■□□□ 1.28
MMD-203ENST00000577038 LOC102724428A0A0B4J2F2 783 aa23.02■■□□□ 1.28
MMD-203ENST00000577038 SIK1P57059 783 aa23.02■■□□□ 1.28
MMD-203ENST00000577038 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.02■■□□□ 1.28
MMD-203ENST00000577038 C4BP0C0L5 1744 aa23.02■■□□□ 1.28
MMD-203ENST00000577038 SSFA2P28290 1259 aa23.01■■□□□ 1.27
MMD-203ENST00000577038 ASAP1Q9ULH1 1129 aa23.01■■□□□ 1.27
MMD-203ENST00000577038 ANKRD26Q9UPS8 1709 aa23.01■■□□□ 1.27
MMD-203ENST00000577038 ITPK1Q13572 414 aa23■■□□□ 1.27
MMD-203ENST00000577038 ADCY9O60503 1353 aa23■■□□□ 1.27
MMD-203ENST00000577038 POLKQ9UBT6 870 aa22.99■■□□□ 1.27
MMD-203ENST00000577038 IGSF1Q8N6C5 1336 aa22.99■■□□□ 1.27
MMD-203ENST00000577038 ITGB4P16144 1822 aa22.98■■□□□ 1.27
MMD-203ENST00000577038 WWC3Q9ULE0 1092 aa22.98■■□□□ 1.27
MMD-203ENST00000577038 PKD1L3Q7Z443 1732 aa22.98■■□□□ 1.27
MMD-203ENST00000577038 PHKG2P15735 406 aa22.97■■□□□ 1.27
MMD-203ENST00000577038 GPBP1L1Q9HC44 474 aaPredicted RBP22.97■■□□□ 1.27
MMD-203ENST00000577038 ATG3Q9NT62 314 aa22.97■■□□□ 1.27
MMD-203ENST00000577038 TMOD3Q9NYL9 352 aa22.97■■□□□ 1.27
MMD-203ENST00000577038 IFNL2Q8IZJ0 200 aa22.96■■□□□ 1.27
MMD-203ENST00000577038 CCER1Q8TC90 406 aaPredicted RBP22.96■■□□□ 1.27
MMD-203ENST00000577038 ATP6V1AP38606 617 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms