RNA–Protein interactions for RNA: ENST00000576952.1

POLR2A-208, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-208ENST00000576952 PTF1AQ7RTS3 328 aa20.85■□□□□ 0.93
POLR2A-208ENST00000576952 EIF4A2Q14240 407 aaKnown RBP20.84■□□□□ 0.93
POLR2A-208ENST00000576952 EZH2Q15910 746 aaKnown RBP20.84■□□□□ 0.93
POLR2A-208ENST00000576952 NCAPD2Q15021 1401 aa20.84■□□□□ 0.93
POLR2A-208ENST00000576952 DDX54Q8TDD1 881 aaKnown RBP20.83■□□□□ 0.93
POLR2A-208ENST00000576952 RAPGEF4Q8WZA2 1011 aa20.83■□□□□ 0.93
POLR2A-208ENST00000576952 EYA1Q99502 592 aa20.83■□□□□ 0.93
POLR2A-208ENST00000576952 ZCRB1Q8TBF4 217 aaKnown RBP20.82■□□□□ 0.92
POLR2A-208ENST00000576952 CAMKK2Q96RR4 588 aa20.82■□□□□ 0.92
POLR2A-208ENST00000576952 ITGB4P16144 1822 aa20.81■□□□□ 0.92
POLR2A-208ENST00000576952 TATP17735 454 aaPredicted RBP20.81■□□□□ 0.92
POLR2A-208ENST00000576952 ACSBG1Q96GR2 724 aa20.81■□□□□ 0.92
POLR2A-208ENST00000576952 BCL11BQ9C0K0 894 aaPredicted RBP20.81■□□□□ 0.92
POLR2A-208ENST00000576952 NPC1L1Q9UHC9 1359 aa20.81■□□□□ 0.92
POLR2A-208ENST00000576952 KCNQ2O43526 872 aa20.8■□□□□ 0.92
POLR2A-208ENST00000576952 TOGARAM1Q9Y4F4 1720 aa20.78■□□□□ 0.92
POLR2A-208ENST00000576952 MTHFSP49914 203 aa20.77■□□□□ 0.92
POLR2A-208ENST00000576952 VIRMAQ69YN4 1812 aaKnown RBP20.76■□□□□ 0.91
POLR2A-208ENST00000576952 PARD3Q8TEW0 1356 aa20.76■□□□□ 0.91
POLR2A-208ENST00000576952 IGSF1Q8N6C5 1336 aa20.76■□□□□ 0.91
POLR2A-208ENST00000576952 PLSCR1O15162 318 aa20.73■□□□□ 0.91
POLR2A-208ENST00000576952 PCDH11XQ9BZA7 1347 aa20.73■□□□□ 0.91
POLR2A-208ENST00000576952 PCDH11YQ9BZA8 1340 aa20.73■□□□□ 0.91
POLR2A-208ENST00000576952 IL13P35225 146 aa20.72■□□□□ 0.91
POLR2A-208ENST00000576952 ZEB1P37275 1124 aaPredicted RBP20.72■□□□□ 0.91
POLR2A-208ENST00000576952 LY75O60449 1722 aa20.72■□□□□ 0.91
POLR2A-208ENST00000576952 CYP27B1O15528 508 aa20.71■□□□□ 0.91
POLR2A-208ENST00000576952 PSDA5PKW4 1024 aaPredicted RBP20.7■□□□□ 0.9
POLR2A-208ENST00000576952 AEBP1Q8IUX7 1158 aa20.7■□□□□ 0.9
POLR2A-208ENST00000576952 SYTL4Q96C24 671 aaPredicted RBP20.7■□□□□ 0.9
POLR2A-208ENST00000576952 COL3A1P02461 1466 aaPredicted RBP20.69■□□□□ 0.9
POLR2A-208ENST00000576952 PRIM1P49642 420 aaKnown RBP20.69■□□□□ 0.9
POLR2A-208ENST00000576952 PROM2Q8N271 834 aa20.69■□□□□ 0.9
POLR2A-208ENST00000576952 SPG7Q9UQ90 795 aa20.69■□□□□ 0.9
POLR2A-208ENST00000576952 R3HDM1Q15032 1099 aaKnown RBP20.67■□□□□ 0.9
POLR2A-208ENST00000576952 SULT6B1Q6IMI4 303 aa20.67■□□□□ 0.9
POLR2A-208ENST00000576952 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.67■□□□□ 0.9
POLR2A-208ENST00000576952 TXNRD1Q16881 649 aa20.66■□□□□ 0.9
POLR2A-208ENST00000576952 KDRP35968 1356 aa20.66■□□□□ 0.9
POLR2A-208ENST00000576952 DIAPH1O60610 1272 aaKnown RBP20.65■□□□□ 0.9
POLR2A-208ENST00000576952 DDX10Q13206 875 aaKnown RBP20.65■□□□□ 0.9
POLR2A-208ENST00000576952 SCN11AQ9UI33 1791 aa20.64■□□□□ 0.9
POLR2A-208ENST00000576952 PLEKHG2Q9H7P9 1386 aa20.64■□□□□ 0.89
POLR2A-208ENST00000576952 PPP2R1AP30153 589 aa20.64■□□□□ 0.89
POLR2A-208ENST00000576952 TAF1LQ8IZX4 1826 aa20.64■□□□□ 0.89
POLR2A-208ENST00000576952 PAPPAQ13219 1627 aa20.64■□□□□ 0.89
POLR2A-208ENST00000576952 HMOX1P09601 288 aa20.63■□□□□ 0.89
POLR2A-208ENST00000576952 PHKG2P15735 406 aa20.63■□□□□ 0.89
POLR2A-208ENST00000576952 TUBGCP6Q96RT7 1819 aa20.62■□□□□ 0.89
POLR2A-208ENST00000576952 NKX1-1Q15270 411 aaPredicted RBP20.62■□□□□ 0.89
POLR2A-208ENST00000576952 NBPF14Q5TI25 921 aa20.62■□□□□ 0.89
POLR2A-208ENST00000576952 IFNL2Q8IZJ0 200 aa20.62■□□□□ 0.89
POLR2A-208ENST00000576952 PLEKHO1Q53GL0 409 aaPredicted RBP20.61■□□□□ 0.89
POLR2A-208ENST00000576952 ANO8Q9HCE9 1232 aaPredicted RBP20.61■□□□□ 0.89
POLR2A-208ENST00000576952 MPRIPQ6WCQ1 1025 aa20.6■□□□□ 0.89
POLR2A-208ENST00000576952 CASZ1Q86V15 1759 aa20.59■□□□□ 0.89
POLR2A-208ENST00000576952 C5P01031 1676 aa20.59■□□□□ 0.89
POLR2A-208ENST00000576952 ZNF530Q6P9A1 599 aaPredicted RBP20.59■□□□□ 0.89
POLR2A-208ENST00000576952 LRP5O75197 1615 aa20.58■□□□□ 0.89
POLR2A-208ENST00000576952 U2SURPO15042 1029 aaKnown RBP20.58■□□□□ 0.89
POLR2A-208ENST00000576952 AMOTQ4VCS5 1084 aa20.58■□□□□ 0.89
POLR2A-208ENST00000576952 CFAP53Q96M91 514 aa20.58■□□□□ 0.89
POLR2A-208ENST00000576952 LRRC4BQ9NT99 713 aa20.58■□□□□ 0.89
POLR2A-208ENST00000576952 KCNQ4P56696 695 aa20.57■□□□□ 0.88
POLR2A-208ENST00000576952 QSER1Q2KHR3 1735 aa20.57■□□□□ 0.88
POLR2A-208ENST00000576952 KDM6AO15550 1401 aaPredicted RBP20.56■□□□□ 0.88
POLR2A-208ENST00000576952 PIGBQ92521 554 aa20.55■□□□□ 0.88
POLR2A-208ENST00000576952 C1orf141Q5JVX7 400 aa20.54■□□□□ 0.88
POLR2A-208ENST00000576952 HSP90AB1P08238 724 aaKnown RBP20.53■□□□□ 0.88
POLR2A-208ENST00000576952 SLC15A2Q16348 729 aa20.53■□□□□ 0.88
POLR2A-208ENST00000576952 SLC27A3Q5K4L6 730 aa20.53■□□□□ 0.88
POLR2A-208ENST00000576952 STK32BQ9NY57 414 aa20.53■□□□□ 0.88
POLR2A-208ENST00000576952 TMOD3Q9NYL9 352 aa20.53■□□□□ 0.88
POLR2A-208ENST00000576952 SRCAPQ6ZRS2 3230 aa20.52■□□□□ 0.88
POLR2A-208ENST00000576952 PALLDQ8WX93 1383 aa20.52■□□□□ 0.88
POLR2A-208ENST00000576952 DCAF5Q96JK2 942 aa20.52■□□□□ 0.88
POLR2A-208ENST00000576952 DLG5Q8TDM6 1919 aa20.52■□□□□ 0.88
POLR2A-208ENST00000576952 ADAMTS7Q9UKP4 1686 aa20.51■□□□□ 0.87
POLR2A-208ENST00000576952 ZNF827Q17R98 1081 aa20.51■□□□□ 0.87
POLR2A-208ENST00000576952 PDGFDQ9GZP0 370 aaPredicted RBP20.51■□□□□ 0.87
POLR2A-208ENST00000576952 CCNL1Q9UK58 526 aaPredicted RBP20.51■□□□□ 0.87
POLR2A-208ENST00000576952 ERVV-2B6SEH9 535 aa20.5■□□□□ 0.87
POLR2A-208ENST00000576952 MTHFSDQ2M296 383 aaKnown RBP20.5■□□□□ 0.87
POLR2A-208ENST00000576952 NUDCQ9Y266 331 aa20.5■□□□□ 0.87
POLR2A-208ENST00000576952 RALBP1Q15311 655 aa20.49■□□□□ 0.87
POLR2A-208ENST00000576952 AKAP4Q5JQC9 854 aa20.49■□□□□ 0.87
POLR2A-208ENST00000576952 SMARCC1Q92922 1105 aaPredicted RBP20.49■□□□□ 0.87
POLR2A-208ENST00000576952 ASAP1Q9ULH1 1129 aa20.49■□□□□ 0.87
POLR2A-208ENST00000576952 UBR3Q6ZT12 1888 aa20.48■□□□□ 0.87
POLR2A-208ENST00000576952 C4BP0C0L5 1744 aa20.48■□□□□ 0.87
POLR2A-208ENST00000576952 RSPH6AQ9H0K4 717 aa20.48■□□□□ 0.87
POLR2A-208ENST00000576952 SIPA1L3O60292 1781 aaPredicted RBP20.48■□□□□ 0.87
POLR2A-208ENST00000576952 U2AF1L5P0DN76 240 aaPredicted RBP20.47■□□□□ 0.87
POLR2A-208ENST00000576952 PRKAR2BP31323 418 aa20.47■□□□□ 0.87
POLR2A-208ENST00000576952 CABP4P57796 275 aa20.47■□□□□ 0.87
POLR2A-208ENST00000576952 U2AF1Q01081 240 aaKnown RBP eCLIP20.47■□□□□ 0.87
POLR2A-208ENST00000576952 AKT1S1Q96B36 256 aa20.47■□□□□ 0.87
POLR2A-208ENST00000576952 ZNF831Q5JPB2 1677 aa20.46■□□□□ 0.87
POLR2A-208ENST00000576952 LGR6Q9HBX8 967 aa20.46■□□□□ 0.87
POLR2A-208ENST00000576952 ATG3Q9NT62 314 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms