RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 CCNL1Q9UK58 526 aaPredicted RBP14.39□□□□□ -0.11
NPLOC4-220ENST00000576940 ANKRD36BQ8N2N9 1353 aa14.38□□□□□ -0.11
NPLOC4-220ENST00000576940 MSL1Q68DK7 614 aa14.38□□□□□ -0.11
NPLOC4-220ENST00000576940 CARD11Q9BXL7 1154 aa14.38□□□□□ -0.11
NPLOC4-220ENST00000576940 COL24A1Q17RW2 1714 aa14.38□□□□□ -0.11
NPLOC4-220ENST00000576940 NSD2O96028 1365 aa14.37□□□□□ -0.11
NPLOC4-220ENST00000576940 TERF2IPQ9NYB0 399 aa14.37□□□□□ -0.11
NPLOC4-220ENST00000576940 SHANK3Q9BYB0 1731 aa14.37□□□□□ -0.11
NPLOC4-220ENST00000576940 TUBGCP6Q96RT7 1819 aa14.36□□□□□ -0.11
NPLOC4-220ENST00000576940 USP54Q70EL1 1684 aa14.36□□□□□ -0.11
NPLOC4-220ENST00000576940 A0A1W2PP64 1363 aa14.36□□□□□ -0.11
NPLOC4-220ENST00000576940 QSER1Q2KHR3 1735 aa14.36□□□□□ -0.11
NPLOC4-220ENST00000576940 EDC4Q6P2E9 1401 aaKnown RBP14.36□□□□□ -0.11
NPLOC4-220ENST00000576940 HOXC9P31274 260 aa14.36□□□□□ -0.11
NPLOC4-220ENST00000576940 AMPHP49418 695 aa14.36□□□□□ -0.11
NPLOC4-220ENST00000576940 MAP3K19Q56UN5 1328 aa14.36□□□□□ -0.11
NPLOC4-220ENST00000576940 NBPF6Q5VWK0 638 aa14.34□□□□□ -0.11
NPLOC4-220ENST00000576940 USHBP1Q8N6Y0 703 aa14.34□□□□□ -0.11
NPLOC4-220ENST00000576940 COG3Q96JB2 828 aa14.34□□□□□ -0.11
NPLOC4-220ENST00000576940 NBPF4Q96M43 638 aa14.34□□□□□ -0.11
NPLOC4-220ENST00000576940 USP47Q96K76 1375 aa14.33□□□□□ -0.12
NPLOC4-220ENST00000576940 ATP10DQ9P241 1426 aa14.32□□□□□ -0.12
NPLOC4-220ENST00000576940 LY75O60449 1722 aa14.32□□□□□ -0.12
NPLOC4-220ENST00000576940 DOT1LQ8TEK3 1739 aa14.32□□□□□ -0.12
NPLOC4-220ENST00000576940 ZNF526Q8TF50 670 aaPredicted RBP14.32□□□□□ -0.12
NPLOC4-220ENST00000576940 GPBP1L1Q9HC44 474 aaPredicted RBP14.32□□□□□ -0.12
NPLOC4-220ENST00000576940 WWC3Q9ULE0 1092 aa14.32□□□□□ -0.12
NPLOC4-220ENST00000576940 RGPD2P0DJD1 1756 aa14.32□□□□□ -0.12
NPLOC4-220ENST00000576940 MEGF6O75095 1541 aa14.31□□□□□ -0.12
NPLOC4-220ENST00000576940 RRS1Q15050 365 aaKnown RBP14.31□□□□□ -0.12
NPLOC4-220ENST00000576940 SMIM5Q71RC9 77 aa14.31□□□□□ -0.12
NPLOC4-220ENST00000576940 CD2APQ9Y5K6 639 aa14.31□□□□□ -0.12
NPLOC4-220ENST00000576940 MPRIPQ6WCQ1 1025 aa14.3□□□□□ -0.12
NPLOC4-220ENST00000576940 PUS7Q96PZ0 661 aaKnown RBP14.3□□□□□ -0.12
NPLOC4-220ENST00000576940 AMIGO3Q86WK7 504 aa14.29□□□□□ -0.12
NPLOC4-220ENST00000576940 FAM208AQ9UK61 1670 aaKnown RBP14.29□□□□□ -0.12
NPLOC4-220ENST00000576940 RAPGEF4Q8WZA2 1011 aa14.28□□□□□ -0.12
NPLOC4-220ENST00000576940 ST20-MTHFSA0A0A6YYL1 179 aa14.27□□□□□ -0.13
NPLOC4-220ENST00000576940 HSPA6P17066 643 aa14.27□□□□□ -0.13
NPLOC4-220ENST00000576940 TATP17735 454 aaPredicted RBP14.27□□□□□ -0.13
NPLOC4-220ENST00000576940 FLAD1Q8NFF5 587 aa14.27□□□□□ -0.13
NPLOC4-220ENST00000576940 GGNBP2Q9H3C7 697 aa14.27□□□□□ -0.13
NPLOC4-220ENST00000576940 FYB1O15117 783 aa14.26□□□□□ -0.13
NPLOC4-220ENST00000576940 HSP90AB2PQ58FF8 381 aa14.26□□□□□ -0.13
NPLOC4-220ENST00000576940 TESK2Q96S53 571 aa14.26□□□□□ -0.13
NPLOC4-220ENST00000576940 PALLDQ8WX93 1383 aa14.25□□□□□ -0.13
NPLOC4-220ENST00000576940 CGNL1Q0VF96 1302 aa14.25□□□□□ -0.13
NPLOC4-220ENST00000576940 PHF14O94880 888 aa14.25□□□□□ -0.13
NPLOC4-220ENST00000576940 IGSF1Q8N6C5 1336 aa14.24□□□□□ -0.13
NPLOC4-220ENST00000576940 CYP27B1O15528 508 aa14.24□□□□□ -0.13
NPLOC4-220ENST00000576940 AK7Q96M32 723 aa14.24□□□□□ -0.13
NPLOC4-220ENST00000576940 ADCY9O60503 1353 aa14.23□□□□□ -0.13
NPLOC4-220ENST00000576940 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.23□□□□□ -0.13
NPLOC4-220ENST00000576940 PIGBQ92521 554 aa14.23□□□□□ -0.13
NPLOC4-220ENST00000576940 C5P01031 1676 aa14.23□□□□□ -0.13
NPLOC4-220ENST00000576940 PCDH11XQ9BZA7 1347 aa14.22□□□□□ -0.13
NPLOC4-220ENST00000576940 PCDH11YQ9BZA8 1340 aa14.22□□□□□ -0.13
NPLOC4-220ENST00000576940 KIF3CO14782 793 aa14.21□□□□□ -0.13
NPLOC4-220ENST00000576940 HMGB2P26583 209 aaKnown RBP14.21□□□□□ -0.13
NPLOC4-220ENST00000576940 SMARCC1Q92922 1105 aaPredicted RBP14.21□□□□□ -0.13
NPLOC4-220ENST00000576940 RTL1A6NKG5 1358 aa14.21□□□□□ -0.14
NPLOC4-220ENST00000576940 TAF1LQ8IZX4 1826 aa14.2□□□□□ -0.14
NPLOC4-220ENST00000576940 LINC00116Q8NCU8 138 aa14.2□□□□□ -0.14
NPLOC4-220ENST00000576940 SMG6Q86US8 1419 aaKnown RBP14.19□□□□□ -0.14
NPLOC4-220ENST00000576940 INSRP06213 1382 aa14.19□□□□□ -0.14
NPLOC4-220ENST00000576940 TONSLQ96HA7 1378 aa14.19□□□□□ -0.14
NPLOC4-220ENST00000576940 C4BP0C0L5 1744 aa14.18□□□□□ -0.14
NPLOC4-220ENST00000576940 LOC102724428A0A0B4J2F2 783 aa14.18□□□□□ -0.14
NPLOC4-220ENST00000576940 SIK1P57059 783 aa14.18□□□□□ -0.14
NPLOC4-220ENST00000576940 SSFA2P28290 1259 aa14.17□□□□□ -0.14
NPLOC4-220ENST00000576940 ITPK1Q13572 414 aa14.17□□□□□ -0.14
NPLOC4-220ENST00000576940 NKX1-1Q15270 411 aaPredicted RBP14.17□□□□□ -0.14
NPLOC4-220ENST00000576940 ASAP1Q9ULH1 1129 aa14.17□□□□□ -0.14
NPLOC4-220ENST00000576940 EMILIN1Q9Y6C2 1016 aa14.17□□□□□ -0.14
NPLOC4-220ENST00000576940 TOGARAM1Q9Y4F4 1720 aa14.16□□□□□ -0.14
NPLOC4-220ENST00000576940 ITGB4P16144 1822 aa14.16□□□□□ -0.14
NPLOC4-220ENST00000576940 GNPATO15228 680 aa14.16□□□□□ -0.14
NPLOC4-220ENST00000576940 PPM1GO15355 546 aaPredicted RBP14.16□□□□□ -0.14
NPLOC4-220ENST00000576940 SLC24A1O60721 1099 aa14.16□□□□□ -0.14
NPLOC4-220ENST00000576940 ATP6V1AP38606 617 aa14.16□□□□□ -0.14
NPLOC4-220ENST00000576940 UBR3Q6ZT12 1888 aa14.15□□□□□ -0.14
NPLOC4-220ENST00000576940 FLT4P35916 1363 aa14.15□□□□□ -0.14
NPLOC4-220ENST00000576940 A0A0G2JLW4 131 aa14.15□□□□□ -0.14
NPLOC4-220ENST00000576940 MMP10P09238 476 aa14.15□□□□□ -0.14
NPLOC4-220ENST00000576940 TMF1P82094 1093 aa14.14□□□□□ -0.15
NPLOC4-220ENST00000576940 DNAJC5GQ8N7S2 189 aa14.14□□□□□ -0.15
NPLOC4-220ENST00000576940 CARD14Q9BXL6 1004 aa14.14□□□□□ -0.15
NPLOC4-220ENST00000576940 TMOD3Q9NYL9 352 aa14.14□□□□□ -0.15
NPLOC4-220ENST00000576940 SPG7Q9UQ90 795 aa14.14□□□□□ -0.15
NPLOC4-220ENST00000576940 BCS1LQ9Y276 419 aa14.14□□□□□ -0.15
NPLOC4-220ENST00000576940 TOMM70O94826 608 aa14.13□□□□□ -0.15
NPLOC4-220ENST00000576940 APLP1P51693 650 aa14.13□□□□□ -0.15
NPLOC4-220ENST00000576940 ARHGAP27Q6ZUM4 889 aa14.13□□□□□ -0.15
NPLOC4-220ENST00000576940 EYA1Q99502 592 aa14.13□□□□□ -0.15
NPLOC4-220ENST00000576940 ATG3Q9NT62 314 aa14.13□□□□□ -0.15
NPLOC4-220ENST00000576940 TRAPPC3LQ5T215 181 aa14.12□□□□□ -0.15
NPLOC4-220ENST00000576940 MAP2P11137 1827 aaKnown RBP14.12□□□□□ -0.15
NPLOC4-220ENST00000576940 KIF24Q5T7B8 1368 aa14.11□□□□□ -0.15
NPLOC4-220ENST00000576940 TGFB2P61812 414 aa14.11□□□□□ -0.15
NPLOC4-220ENST00000576940 IFNL2Q8IZJ0 200 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms