RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 NCAPD2Q15021 1401 aa31.88■■■□□ 2.69
SNF8-217ENST00000576353 PLSCR1O15162 318 aa31.87■■■□□ 2.69
SNF8-217ENST00000576353 PTF1AQ7RTS3 328 aa31.87■■■□□ 2.69
SNF8-217ENST00000576353 MTHFSP49914 203 aa31.86■■■□□ 2.69
SNF8-217ENST00000576353 CNGB1Q14028 1251 aaPredicted RBP31.86■■■□□ 2.69
SNF8-217ENST00000576353 ACSBG1Q96GR2 724 aa31.86■■■□□ 2.69
SNF8-217ENST00000576353 KCNQ2O43526 872 aa31.84■■■□□ 2.69
SNF8-217ENST00000576353 PCDH11XQ9BZA7 1347 aa31.83■■■□□ 2.69
SNF8-217ENST00000576353 PCDH11YQ9BZA8 1340 aa31.83■■■□□ 2.69
SNF8-217ENST00000576353 SBF2Q86WG5 1849 aa31.83■■■□□ 2.69
SNF8-217ENST00000576353 IGSF1Q8N6C5 1336 aa31.82■■■□□ 2.68
SNF8-217ENST00000576353 SPG7Q9UQ90 795 aa31.81■■■□□ 2.68
SNF8-217ENST00000576353 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.8■■■□□ 2.68
SNF8-217ENST00000576353 IL13P35225 146 aa31.78■■■□□ 2.68
SNF8-217ENST00000576353 PLEKHG2Q9H7P9 1386 aa31.76■■■□□ 2.67
SNF8-217ENST00000576353 CYP27B1O15528 508 aa31.75■■■□□ 2.67
SNF8-217ENST00000576353 PRIM1P49642 420 aaKnown RBP31.75■■■□□ 2.67
SNF8-217ENST00000576353 NBPF14Q5TI25 921 aa31.75■■■□□ 2.67
SNF8-217ENST00000576353 NHSQ6T4R5 1651 aa31.74■■■□□ 2.67
SNF8-217ENST00000576353 SYTL4Q96C24 671 aaPredicted RBP31.74■■■□□ 2.67
SNF8-217ENST00000576353 DIAPH1O60610 1272 aaKnown RBP31.72■■■□□ 2.67
SNF8-217ENST00000576353 SULT6B1Q6IMI4 303 aa31.71■■■□□ 2.67
SNF8-217ENST00000576353 SHANK3Q9BYB0 1731 aa31.71■■■□□ 2.67
SNF8-217ENST00000576353 PROM2Q8N271 834 aa31.7■■■□□ 2.67
SNF8-217ENST00000576353 TXNRD1Q16881 649 aa31.69■■■□□ 2.66
SNF8-217ENST00000576353 PLEKHO1Q53GL0 409 aaPredicted RBP31.69■■■□□ 2.66
SNF8-217ENST00000576353 RGPD3A6NKT7 1758 aaPredicted RBP31.68■■■□□ 2.66
SNF8-217ENST00000576353 RGPD4Q7Z3J3 1758 aa31.68■■■□□ 2.66
SNF8-217ENST00000576353 PSDA5PKW4 1024 aaPredicted RBP31.68■■■□□ 2.66
SNF8-217ENST00000576353 R3HDM1Q15032 1099 aaKnown RBP31.68■■■□□ 2.66
SNF8-217ENST00000576353 NKX1-1Q15270 411 aaPredicted RBP31.68■■■□□ 2.66
SNF8-217ENST00000576353 AMOTQ4VCS5 1084 aa31.68■■■□□ 2.66
SNF8-217ENST00000576353 AEBP1Q8IUX7 1158 aa31.68■■■□□ 2.66
SNF8-217ENST00000576353 IFNL2Q8IZJ0 200 aa31.68■■■□□ 2.66
SNF8-217ENST00000576353 RREB1Q92766 1687 aa31.67■■■□□ 2.66
SNF8-217ENST00000576353 PKD1L3Q7Z443 1732 aa31.66■■■□□ 2.66
SNF8-217ENST00000576353 CFAP53Q96M91 514 aa31.66■■■□□ 2.66
SNF8-217ENST00000576353 KDRP35968 1356 aa31.66■■■□□ 2.66
SNF8-217ENST00000576353 PHKG2P15735 406 aa31.65■■■□□ 2.66
SNF8-217ENST00000576353 KAT6BQ8WYB5 2073 aa31.64■■■□□ 2.66
SNF8-217ENST00000576353 PPP2R1AP30153 589 aa31.64■■■□□ 2.66
SNF8-217ENST00000576353 DDX10Q13206 875 aaKnown RBP31.64■■■□□ 2.66
SNF8-217ENST00000576353 BTAF1O14981 1849 aa31.61■■■□□ 2.65
SNF8-217ENST00000576353 NUP188Q5SRE5 1749 aa31.61■■■□□ 2.65
SNF8-217ENST00000576353 DOT1LQ8TEK3 1739 aa31.61■■■□□ 2.65
SNF8-217ENST00000576353 HSP90AB1P08238 724 aaKnown RBP31.6■■■□□ 2.65
SNF8-217ENST00000576353 HMOX1P09601 288 aa31.59■■■□□ 2.65
SNF8-217ENST00000576353 SLC27A3Q5K4L6 730 aa31.59■■■□□ 2.65
SNF8-217ENST00000576353 ZNF530Q6P9A1 599 aaPredicted RBP31.59■■■□□ 2.65
SNF8-217ENST00000576353 MPRIPQ6WCQ1 1025 aa31.59■■■□□ 2.65
SNF8-217ENST00000576353 U2SURPO15042 1029 aaKnown RBP31.58■■■□□ 2.65
SNF8-217ENST00000576353 COL3A1P02461 1466 aaPredicted RBP31.58■■■□□ 2.65
SNF8-217ENST00000576353 C1orf141Q5JVX7 400 aa31.56■■■□□ 2.64
SNF8-217ENST00000576353 NUDCQ9Y266 331 aa31.56■■■□□ 2.64
SNF8-217ENST00000576353 DCAF5Q96JK2 942 aa31.55■■■□□ 2.64
SNF8-217ENST00000576353 STK32BQ9NY57 414 aa31.55■■■□□ 2.64
SNF8-217ENST00000576353 ANO8Q9HCE9 1232 aaPredicted RBP31.54■■■□□ 2.64
SNF8-217ENST00000576353 PIGBQ92521 554 aa31.53■■■□□ 2.64
SNF8-217ENST00000576353 TMOD3Q9NYL9 352 aa31.53■■■□□ 2.64
SNF8-217ENST00000576353 SMARCC1Q92922 1105 aaPredicted RBP31.52■■■□□ 2.64
SNF8-217ENST00000576353 LRRC4BQ9NT99 713 aa31.52■■■□□ 2.64
SNF8-217ENST00000576353 ERVV-2B6SEH9 535 aa31.51■■■□□ 2.63
SNF8-217ENST00000576353 RALBP1Q15311 655 aa31.51■■■□□ 2.63
SNF8-217ENST00000576353 SLC15A2Q16348 729 aa31.5■■■□□ 2.63
SNF8-217ENST00000576353 CCNL1Q9UK58 526 aaPredicted RBP31.49■■■□□ 2.63
SNF8-217ENST00000576353 HMGB2P26583 209 aaKnown RBP31.48■■■□□ 2.63
SNF8-217ENST00000576353 PALLDQ8WX93 1383 aa31.47■■■□□ 2.63
SNF8-217ENST00000576353 AKAP4Q5JQC9 854 aa31.47■■■□□ 2.63
SNF8-217ENST00000576353 TOGARAM1Q9Y4F4 1720 aa31.46■■■□□ 2.63
SNF8-217ENST00000576353 U2AF1L5P0DN76 240 aaPredicted RBP31.44■■■□□ 2.62
SNF8-217ENST00000576353 CABP4P57796 275 aa31.44■■■□□ 2.62
SNF8-217ENST00000576353 U2AF1Q01081 240 aaKnown RBP eCLIP31.44■■■□□ 2.62
SNF8-217ENST00000576353 MTHFSDQ2M296 383 aaKnown RBP31.44■■■□□ 2.62
SNF8-217ENST00000576353 KCNQ4P56696 695 aa31.43■■■□□ 2.62
SNF8-217ENST00000576353 KDM6AO15550 1401 aaPredicted RBP31.41■■■□□ 2.62
SNF8-217ENST00000576353 AKT1S1Q96B36 256 aa31.41■■■□□ 2.62
SNF8-217ENST00000576353 ASAP1Q9ULH1 1129 aa31.4■■■□□ 2.62
SNF8-217ENST00000576353 ITGB4P16144 1822 aa31.4■■■□□ 2.62
SNF8-217ENST00000576353 LY75O60449 1722 aa31.39■■■□□ 2.62
SNF8-217ENST00000576353 FCHSD2O94868 740 aa31.39■■■□□ 2.62
SNF8-217ENST00000576353 PRKAR2BP31323 418 aa31.39■■■□□ 2.62
SNF8-217ENST00000576353 ZNF827Q17R98 1081 aa31.39■■■□□ 2.62
SNF8-217ENST00000576353 GAS2L2Q8NHY3 880 aa31.39■■■□□ 2.62
SNF8-217ENST00000576353 RSPH6AQ9H0K4 717 aa31.39■■■□□ 2.62
SNF8-217ENST00000576353 ATG3Q9NT62 314 aa31.38■■■□□ 2.61
SNF8-217ENST00000576353 PAPPAQ13219 1627 aa31.38■■■□□ 2.61
SNF8-217ENST00000576353 ZNF316A6NFI3 1004 aaPredicted RBP31.37■■■□□ 2.61
SNF8-217ENST00000576353 NFATC2IPQ8NCF5 419 aa31.36■■■□□ 2.61
SNF8-217ENST00000576353 LOC102724428A0A0B4J2F2 783 aa31.35■■■□□ 2.61
SNF8-217ENST00000576353 SIK1P57059 783 aa31.35■■■□□ 2.61
SNF8-217ENST00000576353 SPON1Q9HCB6 807 aa31.35■■■□□ 2.61
SNF8-217ENST00000576353 TFCP2L1Q9NZI6 479 aa31.35■■■□□ 2.61
SNF8-217ENST00000576353 MYBBP1AQ9BQG0 1328 aaKnown RBP31.34■■■□□ 2.61
SNF8-217ENST00000576353 RNMTO43148 476 aaKnown RBP31.34■■■□□ 2.61
SNF8-217ENST00000576353 LGR6Q9HBX8 967 aa31.34■■■□□ 2.61
SNF8-217ENST00000576353 SRCAPQ6ZRS2 3230 aa31.34■■■□□ 2.61
SNF8-217ENST00000576353 PDGFDQ9GZP0 370 aaPredicted RBP31.33■■■□□ 2.61
SNF8-217ENST00000576353 LRP5O75197 1615 aa31.32■■■□□ 2.6
SNF8-217ENST00000576353 PHACTR3Q96KR7 559 aa31.32■■■□□ 2.6
SNF8-217ENST00000576353 GNAT3A8MTJ3 354 aa31.31■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms