RNA–Protein interactions for RNA: ENST00000576112.2

TSR1-204, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 5 BASIC

Gene TSR1, Length 1,290 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-204ENST00000576112 GOLGB1Q14789 3259 aaKnown RBP20.67■□□□□ 0.9
TSR1-204ENST00000576112 AMPHP49418 695 aa20.67■□□□□ 0.9
TSR1-204ENST00000576112 RRS1Q15050 365 aaKnown RBP20.67■□□□□ 0.9
TSR1-204ENST00000576112 ARXQ96QS3 562 aa20.67■□□□□ 0.9
TSR1-204ENST00000576112 TOGARAM1Q9Y4F4 1720 aa20.67■□□□□ 0.9
TSR1-204ENST00000576112 PRIM1P49642 420 aaKnown RBP20.66■□□□□ 0.9
TSR1-204ENST00000576112 SYTL4Q96C24 671 aaPredicted RBP20.66■□□□□ 0.9
TSR1-204ENST00000576112 PNPLA7Q6ZV29 1317 aa20.66■□□□□ 0.9
TSR1-204ENST00000576112 USP47Q96K76 1375 aa20.66■□□□□ 0.9
TSR1-204ENST00000576112 MAP3K5Q99683 1374 aa20.66■□□□□ 0.9
TSR1-204ENST00000576112 C5P01031 1676 aa20.66■□□□□ 0.9
TSR1-204ENST00000576112 USHBP1Q8N6Y0 703 aa20.65■□□□□ 0.9
TSR1-204ENST00000576112 GGNBP2Q9H3C7 697 aa20.65■□□□□ 0.9
TSR1-204ENST00000576112 SLC27A3Q5K4L6 730 aa20.64■□□□□ 0.89
TSR1-204ENST00000576112 TAF1LQ8IZX4 1826 aa20.63■□□□□ 0.89
TSR1-204ENST00000576112 FYB1O15117 783 aa20.63■□□□□ 0.89
TSR1-204ENST00000576112 NBPF6Q5VWK0 638 aa20.63■□□□□ 0.89
TSR1-204ENST00000576112 NBPF4Q96M43 638 aa20.63■□□□□ 0.89
TSR1-204ENST00000576112 ANKRD26Q9UPS8 1709 aa20.63■□□□□ 0.89
TSR1-204ENST00000576112 PKD1L3Q7Z443 1732 aa20.62■□□□□ 0.89
TSR1-204ENST00000576112 ZCRB1Q8TBF4 217 aaKnown RBP20.62■□□□□ 0.89
TSR1-204ENST00000576112 ITGB4P16144 1822 aa20.62■□□□□ 0.89
TSR1-204ENST00000576112 ZNF784Q8NCA9 323 aaPredicted RBP20.61■□□□□ 0.89
TSR1-204ENST00000576112 SMG6Q86US8 1419 aaKnown RBP20.6■□□□□ 0.89
TSR1-204ENST00000576112 TMF1P82094 1093 aa20.59■□□□□ 0.89
TSR1-204ENST00000576112 TFCP2L1Q9NZI6 479 aa20.58■□□□□ 0.89
TSR1-204ENST00000576112 INSRP06213 1382 aa20.58■□□□□ 0.88
TSR1-204ENST00000576112 HSP90AB2PQ58FF8 381 aa20.57■□□□□ 0.88
TSR1-204ENST00000576112 KLHL34Q8N239 644 aa20.57■□□□□ 0.88
TSR1-204ENST00000576112 SLC16A10Q8TF71 515 aa20.56■□□□□ 0.88
TSR1-204ENST00000576112 CCNL1Q9UK58 526 aaPredicted RBP20.56■□□□□ 0.88
TSR1-204ENST00000576112 FLT4P35916 1363 aa20.56■□□□□ 0.88
TSR1-204ENST00000576112 NSD3Q9BZ95 1437 aa20.55■□□□□ 0.88
TSR1-204ENST00000576112 SLC24A1O60721 1099 aa20.55■□□□□ 0.88
TSR1-204ENST00000576112 NLGN2Q8NFZ4 835 aa20.54■□□□□ 0.88
TSR1-204ENST00000576112 RAPGEF4Q8WZA2 1011 aa20.54■□□□□ 0.88
TSR1-204ENST00000576112 CARD14Q9BXL6 1004 aa20.54■□□□□ 0.88
TSR1-204ENST00000576112 CGNL1Q0VF96 1302 aa20.53■□□□□ 0.88
TSR1-204ENST00000576112 C4BP0C0L5 1744 aa20.53■□□□□ 0.88
TSR1-204ENST00000576112 MAP2P11137 1827 aaKnown RBP20.53■□□□□ 0.88
TSR1-204ENST00000576112 POLD1P28340 1107 aa20.53■□□□□ 0.88
TSR1-204ENST00000576112 NCAPD2Q15021 1401 aa20.53■□□□□ 0.88
TSR1-204ENST00000576112 UBR3Q6ZT12 1888 aa20.52■□□□□ 0.88
TSR1-204ENST00000576112 TATP17735 454 aaPredicted RBP20.52■□□□□ 0.88
TSR1-204ENST00000576112 EMILIN1Q9Y6C2 1016 aa20.52■□□□□ 0.88
TSR1-204ENST00000576112 PCDH11XQ9BZA7 1347 aa20.52■□□□□ 0.87
TSR1-204ENST00000576112 PCDH11YQ9BZA8 1340 aa20.52■□□□□ 0.87
TSR1-204ENST00000576112 KIF24Q5T7B8 1368 aa20.51■□□□□ 0.87
TSR1-204ENST00000576112 GPR162Q16538 588 aa20.51■□□□□ 0.87
TSR1-204ENST00000576112 COL23A1Q86Y22 540 aaPredicted RBP20.51■□□□□ 0.87
TSR1-204ENST00000576112 PALLDQ8WX93 1383 aa20.5■□□□□ 0.87
TSR1-204ENST00000576112 CYP27B1O15528 508 aa20.5■□□□□ 0.87
TSR1-204ENST00000576112 MSL1Q68DK7 614 aa20.5■□□□□ 0.87
TSR1-204ENST00000576112 PELP1Q8IZL8 1130 aaKnown RBP20.49■□□□□ 0.87
TSR1-204ENST00000576112 MSH5O43196 834 aa20.48■□□□□ 0.87
TSR1-204ENST00000576112 MPRIPQ6WCQ1 1025 aa20.46■□□□□ 0.87
TSR1-204ENST00000576112 AMIGO3Q86WK7 504 aa20.46■□□□□ 0.87
TSR1-204ENST00000576112 YBX3P16989 372 aaKnown RBP eCLIP20.45■□□□□ 0.866e-6■□□□□ 10.6
TSR1-204ENST00000576112 TRIM26Q12899 539 aaPredicted RBP20.45■□□□□ 0.86
TSR1-204ENST00000576112 CDCA8Q53HL2 280 aa20.45■□□□□ 0.86
TSR1-204ENST00000576112 SMIM5Q71RC9 77 aa20.43■□□□□ 0.86
TSR1-204ENST00000576112 PPM1GO15355 546 aaPredicted RBP20.42■□□□□ 0.86
TSR1-204ENST00000576112 PIGBQ92521 554 aa20.41■□□□□ 0.86
TSR1-204ENST00000576112 C1QTNF8P60827 252 aa20.4■□□□□ 0.86
TSR1-204ENST00000576112 WASHC2AQ641Q2 1341 aa20.39■□□□□ 0.85
TSR1-204ENST00000576112 EYA1Q99502 592 aa20.39■□□□□ 0.85
TSR1-204ENST00000576112 SENP3-EIF4A1A0A087X0R7 540 aa20.37■□□□□ 0.85
TSR1-204ENST00000576112 PHF14O94880 888 aa20.37■□□□□ 0.85
TSR1-204ENST00000576112 NKX1-1Q15270 411 aaPredicted RBP20.37■□□□□ 0.85
TSR1-204ENST00000576112 POLKQ9UBT6 870 aa20.37■□□□□ 0.85
TSR1-204ENST00000576112 LINC00116Q8NCU8 138 aa20.36■□□□□ 0.85
TSR1-204ENST00000576112 SMARCC1Q92922 1105 aaPredicted RBP20.36■□□□□ 0.85
TSR1-204ENST00000576112 AK7Q96M32 723 aa20.36■□□□□ 0.85
TSR1-204ENST00000576112 COL5A3P25940 1745 aaPredicted RBP20.36■□□□□ 0.85
TSR1-204ENST00000576112 SPG7Q9UQ90 795 aa20.35■□□□□ 0.85
TSR1-204ENST00000576112 KIAA1551Q9HCM1 1747 aa20.35■□□□□ 0.85
TSR1-204ENST00000576112 FLAD1Q8NFF5 587 aa20.34■□□□□ 0.85
TSR1-204ENST00000576112 ASAP1Q9ULH1 1129 aa20.34■□□□□ 0.85
TSR1-204ENST00000576112 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.33■□□□□ 0.85
TSR1-204ENST00000576112 LOC102724428A0A0B4J2F2 783 aa20.33■□□□□ 0.85
TSR1-204ENST00000576112 GIGYF1O75420 1035 aaPredicted RBP20.33■□□□□ 0.85
TSR1-204ENST00000576112 PHKG2P15735 406 aa20.33■□□□□ 0.85
TSR1-204ENST00000576112 TNNT2P45379 298 aaPredicted RBP20.33■□□□□ 0.85
TSR1-204ENST00000576112 SIK1P57059 783 aa20.33■□□□□ 0.85
TSR1-204ENST00000576112 ITPK1Q13572 414 aa20.33■□□□□ 0.85
TSR1-204ENST00000576112 EIF4A2Q14240 407 aaKnown RBP20.33■□□□□ 0.85
TSR1-204ENST00000576112 POLR3GLQ9BT43 218 aa20.33■□□□□ 0.85
TSR1-204ENST00000576112 ZNF831Q5JPB2 1677 aa20.32■□□□□ 0.84
TSR1-204ENST00000576112 KIF13BQ9NQT8 1826 aa20.32■□□□□ 0.84
TSR1-204ENST00000576112 CD2APQ9Y5K6 639 aa20.32■□□□□ 0.84
TSR1-204ENST00000576112 ATP10DQ9P241 1426 aa20.32■□□□□ 0.84
TSR1-204ENST00000576112 KDRP35968 1356 aa20.32■□□□□ 0.84
TSR1-204ENST00000576112 C4AP0C0L4 1744 aa20.31■□□□□ 0.84
TSR1-204ENST00000576112 GRIN3BO60391 1043 aa20.31■□□□□ 0.84
TSR1-204ENST00000576112 TMOD3Q9NYL9 352 aa20.31■□□□□ 0.84
TSR1-204ENST00000576112 WWC3Q9ULE0 1092 aa20.31■□□□□ 0.84
TSR1-204ENST00000576112 CEP350Q5VT06 3117 aa20.31■□□□□ 0.84
TSR1-204ENST00000576112 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.3■□□□□ 0.842e-6■■□□□ 12.8
TSR1-204ENST00000576112 N4BP2Q86UW6 1770 aaPredicted RBP20.29■□□□□ 0.84
TSR1-204ENST00000576112 SSFA2P28290 1259 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms