RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 THRAP3Q9Y2W1 955 aaKnown RBP10.71□□□□□ -0.69
CCDC40-215ENST00000576033 BTAF1O14981 1849 aa10.7□□□□□ -0.7
CCDC40-215ENST00000576033 DDB1Q16531 1140 aa10.7□□□□□ -0.7
CCDC40-215ENST00000576033 ITGB4P16144 1822 aa10.7□□□□□ -0.7
CCDC40-215ENST00000576033 CCDC184Q52MB2 194 aa10.69□□□□□ -0.7
CCDC40-215ENST00000576033 PDE3BQ13370 1112 aa10.68□□□□□ -0.7
CCDC40-215ENST00000576033 SULT6B1Q6IMI4 303 aa10.68□□□□□ -0.7
CCDC40-215ENST00000576033 DDX54Q8TDD1 881 aaKnown RBP10.68□□□□□ -0.7
CCDC40-215ENST00000576033 ACSBG1Q96GR2 724 aa10.68□□□□□ -0.7
CCDC40-215ENST00000576033 RREB1Q92766 1687 aa10.68□□□□□ -0.7
CCDC40-215ENST00000576033 NUP188Q5SRE5 1749 aa10.67□□□□□ -0.7
CCDC40-215ENST00000576033 KDRP35968 1356 aa10.67□□□□□ -0.7
CCDC40-215ENST00000576033 U2SURPO15042 1029 aaKnown RBP10.67□□□□□ -0.7
CCDC40-215ENST00000576033 KCNQ2O43526 872 aa10.67□□□□□ -0.7
CCDC40-215ENST00000576033 DIAPH1O60610 1272 aaKnown RBP10.67□□□□□ -0.7
CCDC40-215ENST00000576033 TRIM37O94972 964 aa10.67□□□□□ -0.7
CCDC40-215ENST00000576033 DEFB132Q7Z7B7 95 aa10.67□□□□□ -0.7
CCDC40-215ENST00000576033 PRKRIP1Q9H875 184 aaPredicted RBP10.67□□□□□ -0.7
CCDC40-215ENST00000576033 CYP27B1O15528 508 aa10.66□□□□□ -0.7
CCDC40-215ENST00000576033 TATP17735 454 aaPredicted RBP10.66□□□□□ -0.7
CCDC40-215ENST00000576033 RAPGEF4Q8WZA2 1011 aa10.66□□□□□ -0.7
CCDC40-215ENST00000576033 DLG5Q8TDM6 1919 aa10.66□□□□□ -0.7
CCDC40-215ENST00000576033 KAT6BQ8WYB5 2073 aa10.65□□□□□ -0.7
CCDC40-215ENST00000576033 MYBBP1AQ9BQG0 1328 aaKnown RBP10.65□□□□□ -0.7
CCDC40-215ENST00000576033 EXOC5O00471 708 aa10.65□□□□□ -0.7
CCDC40-215ENST00000576033 ZCRB1Q8TBF4 217 aaKnown RBP10.65□□□□□ -0.7
CCDC40-215ENST00000576033 KDM6AO15550 1401 aaPredicted RBP10.65□□□□□ -0.7
CCDC40-215ENST00000576033 SCN11AQ9UI33 1791 aa10.65□□□□□ -0.71
CCDC40-215ENST00000576033 CDCA7Q9BWT1 371 aaPredicted RBP10.64□□□□□ -0.71
CCDC40-215ENST00000576033 ADAMTS7Q9UKP4 1686 aa10.63□□□□□ -0.71
CCDC40-215ENST00000576033 SENP3-EIF4A1A0A087X0R7 540 aa10.63□□□□□ -0.71
CCDC40-215ENST00000576033 RALBP1Q15311 655 aa10.63□□□□□ -0.71
CCDC40-215ENST00000576033 MIER1Q8N108 512 aa10.63□□□□□ -0.71
CCDC40-215ENST00000576033 RSPH6AQ9H0K4 717 aa10.63□□□□□ -0.71
CCDC40-215ENST00000576033 RGPD3A6NKT7 1758 aaPredicted RBP10.62□□□□□ -0.71
CCDC40-215ENST00000576033 RGPD4Q7Z3J3 1758 aa10.62□□□□□ -0.71
CCDC40-215ENST00000576033 PCDH11XQ9BZA7 1347 aa10.62□□□□□ -0.71
CCDC40-215ENST00000576033 PCDH11YQ9BZA8 1340 aa10.62□□□□□ -0.71
CCDC40-215ENST00000576033 LY75O60449 1722 aa10.62□□□□□ -0.71
CCDC40-215ENST00000576033 EN1Q05925 392 aaPredicted RBP10.62□□□□□ -0.71
CCDC40-215ENST00000576033 FAM196AQ6ZSG2 479 aa10.62□□□□□ -0.71
CCDC40-215ENST00000576033 PHACTR3Q96KR7 559 aa10.62□□□□□ -0.71
CCDC40-215ENST00000576033 SIPA1L3O60292 1781 aaPredicted RBP10.62□□□□□ -0.71
CCDC40-215ENST00000576033 PAPPAQ13219 1627 aa10.62□□□□□ -0.71
CCDC40-215ENST00000576033 TUBGCP6Q96RT7 1819 aa10.61□□□□□ -0.71
CCDC40-215ENST00000576033 BCL9O00512 1426 aa10.61□□□□□ -0.71
CCDC40-215ENST00000576033 U2AF1L5P0DN76 240 aaPredicted RBP10.61□□□□□ -0.71
CCDC40-215ENST00000576033 PHKG2P15735 406 aa10.61□□□□□ -0.71
CCDC40-215ENST00000576033 PRKAR2BP31323 418 aa10.61□□□□□ -0.71
CCDC40-215ENST00000576033 U2AF1Q01081 240 aaKnown RBP eCLIP10.61□□□□□ -0.71
CCDC40-215ENST00000576033 ZNF530Q6P9A1 599 aaPredicted RBP10.61□□□□□ -0.71
CCDC40-215ENST00000576033 CFAP53Q96M91 514 aa10.61□□□□□ -0.71
CCDC40-215ENST00000576033 EZH2Q15910 746 aaKnown RBP10.6□□□□□ -0.71
CCDC40-215ENST00000576033 MTHFSDQ2M296 383 aaKnown RBP10.6□□□□□ -0.71
CCDC40-215ENST00000576033 SYTL4Q96C24 671 aaPredicted RBP10.6□□□□□ -0.71
CCDC40-215ENST00000576033 APBA3O96018 575 aa10.59□□□□□ -0.71
CCDC40-215ENST00000576033 PRIM1P49642 420 aaKnown RBP10.59□□□□□ -0.71
CCDC40-215ENST00000576033 KCNQ4P56696 695 aa10.59□□□□□ -0.71
CCDC40-215ENST00000576033 MPRIPQ6WCQ1 1025 aa10.59□□□□□ -0.71
CCDC40-215ENST00000576033 CCDC146Q8IYE0 955 aa10.59□□□□□ -0.71
CCDC40-215ENST00000576033 C5P01031 1676 aa10.59□□□□□ -0.71
CCDC40-215ENST00000576033 SRCAPQ6ZRS2 3230 aa10.58□□□□□ -0.72
CCDC40-215ENST00000576033 MRC1P22897 1456 aa10.58□□□□□ -0.72
CCDC40-215ENST00000576033 SPG7Q9UQ90 795 aa10.58□□□□□ -0.72
CCDC40-215ENST00000576033 TAF1LQ8IZX4 1826 aa10.58□□□□□ -0.72
CCDC40-215ENST00000576033 LGR6Q9HBX8 967 aa10.57□□□□□ -0.72
CCDC40-215ENST00000576033 TJP1Q07157 1748 aa10.57□□□□□ -0.72
CCDC40-215ENST00000576033 UBR2Q8IWV8 1755 aa10.57□□□□□ -0.72
CCDC40-215ENST00000576033 MAP3K5Q99683 1374 aa10.56□□□□□ -0.72
CCDC40-215ENST00000576033 ANP32CO43423 234 aa10.56□□□□□ -0.72
CCDC40-215ENST00000576033 DCTN1Q14203 1278 aa10.56□□□□□ -0.72
CCDC40-215ENST00000576033 PLEKHO1Q53GL0 409 aaPredicted RBP10.56□□□□□ -0.72
CCDC40-215ENST00000576033 IFNL2Q8IZJ0 200 aa10.56□□□□□ -0.72
CCDC40-215ENST00000576033 PROM2Q8N271 834 aa10.56□□□□□ -0.72
CCDC40-215ENST00000576033 CAMKK2Q96RR4 588 aa10.56□□□□□ -0.72
CCDC40-215ENST00000576033 PLEKHF1Q96S99 279 aa10.56□□□□□ -0.72
CCDC40-215ENST00000576033 BCL11BQ9C0K0 894 aaPredicted RBP10.56□□□□□ -0.72
CCDC40-215ENST00000576033 SF3B2Q13435 895 aaKnown RBP10.55□□□□□ -0.72
CCDC40-215ENST00000576033 NKX1-1Q15270 411 aaPredicted RBP10.55□□□□□ -0.72
CCDC40-215ENST00000576033 PIGBQ92521 554 aa10.55□□□□□ -0.72
CCDC40-215ENST00000576033 ANO8Q9HCE9 1232 aaPredicted RBP10.55□□□□□ -0.72
CCDC40-215ENST00000576033 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.55□□□□□ -0.72
CCDC40-215ENST00000576033 NUDCQ9Y266 331 aa10.55□□□□□ -0.72
CCDC40-215ENST00000576033 RRP7AQ9Y3A4 280 aaKnown RBP10.55□□□□□ -0.72
CCDC40-215ENST00000576033 COL5A3P25940 1745 aaPredicted RBP10.55□□□□□ -0.72
CCDC40-215ENST00000576033 KCPQ6ZWJ8 1503 aa10.54□□□□□ -0.72
CCDC40-215ENST00000576033 BAG6P46379 1132 aa10.54□□□□□ -0.72
CCDC40-215ENST00000576033 C1orf141Q5JVX7 400 aa10.54□□□□□ -0.72
CCDC40-215ENST00000576033 MCM10Q7L590 875 aa10.54□□□□□ -0.72
CCDC40-215ENST00000576033 THUMPD2Q9BTF0 503 aaKnown RBP10.54□□□□□ -0.72
CCDC40-215ENST00000576033 LRRC4BQ9NT99 713 aa10.54□□□□□ -0.72
CCDC40-215ENST00000576033 ADAMTS8Q9UP79 889 aa10.54□□□□□ -0.72
CCDC40-215ENST00000576033 KDM3BQ7LBC6 1761 aa10.54□□□□□ -0.72
CCDC40-215ENST00000576033 PALLDQ8WX93 1383 aa10.53□□□□□ -0.72
CCDC40-215ENST00000576033 PLEKHG2Q9H7P9 1386 aa10.53□□□□□ -0.72
CCDC40-215ENST00000576033 PSDA5PKW4 1024 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-215ENST00000576033 AMOTQ4VCS5 1084 aa10.53□□□□□ -0.72
CCDC40-215ENST00000576033 AKAP4Q5JQC9 854 aa10.53□□□□□ -0.72
CCDC40-215ENST00000576033 MRS2Q9HD23 443 aa10.53□□□□□ -0.72
CCDC40-215ENST00000576033 ASAP1Q9ULH1 1129 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms