RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 NOLC1Q14978 699 aaKnown RBP eCLIP17.67■□□□□ 0.42
SCARF1-209ENST00000576012 ATP2B3Q16720 1220 aa17.67■□□□□ 0.42
SCARF1-209ENST00000576012 ZRANB1Q9UGI0 708 aa17.67■□□□□ 0.42
SCARF1-209ENST00000576012 ADCY5O95622 1261 aa17.67■□□□□ 0.42
SCARF1-209ENST00000576012 ZNF710Q8N1W2 664 aa17.67■□□□□ 0.42
SCARF1-209ENST00000576012 SMAP1Q8IYB5 467 aaPredicted RBP17.66■□□□□ 0.42
SCARF1-209ENST00000576012 DCTPP1Q9H773 170 aa17.66■□□□□ 0.42
SCARF1-209ENST00000576012 REC8O95072 547 aa17.66■□□□□ 0.42
SCARF1-209ENST00000576012 MAP4K4O95819 1239 aaPredicted RBP17.66■□□□□ 0.42
SCARF1-209ENST00000576012 USP48Q86UV5 1035 aa17.66■□□□□ 0.42
SCARF1-209ENST00000576012 PRAM1Q96QH2 718 aa17.66■□□□□ 0.42
SCARF1-209ENST00000576012 ANKRD36BQ8N2N9 1353 aa17.66■□□□□ 0.42
SCARF1-209ENST00000576012 F6X3S4 739 aa17.66■□□□□ 0.42
SCARF1-209ENST00000576012 NECTIN2Q92692 538 aa17.66■□□□□ 0.42
SCARF1-209ENST00000576012 ERC2O15083 957 aa17.65■□□□□ 0.42
SCARF1-209ENST00000576012 CHMP4BQ9H444 224 aaKnown RBP17.65■□□□□ 0.42
SCARF1-209ENST00000576012 TERF2IPQ9NYB0 399 aa17.65■□□□□ 0.42
SCARF1-209ENST00000576012 ABCA6Q8N139 1617 aa17.65■□□□□ 0.42
SCARF1-209ENST00000576012 IL16Q14005 1332 aa17.64■□□□□ 0.42
SCARF1-209ENST00000576012 FIBPO43427 364 aa17.64■□□□□ 0.42
SCARF1-209ENST00000576012 RRS1Q15050 365 aaKnown RBP17.64■□□□□ 0.42
SCARF1-209ENST00000576012 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.64■□□□□ 0.41
SCARF1-209ENST00000576012 STAG3Q9UJ98 1225 aa17.64■□□□□ 0.41
SCARF1-209ENST00000576012 MBD3O95983 291 aa17.64■□□□□ 0.41
SCARF1-209ENST00000576012 NFE2L2Q16236 605 aa17.64■□□□□ 0.41
SCARF1-209ENST00000576012 GNAI1P63096 354 aa17.63■□□□□ 0.41
SCARF1-209ENST00000576012 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.63■□□□□ 0.41
SCARF1-209ENST00000576012 MYRIPQ8NFW9 859 aa17.63■□□□□ 0.41
SCARF1-209ENST00000576012 API5Q9BZZ5 524 aaKnown RBP17.63■□□□□ 0.41
SCARF1-209ENST00000576012 SPHKAPQ2M3C7 1700 aa17.63■□□□□ 0.41
SCARF1-209ENST00000576012 FCHSD2O94868 740 aa17.63■□□□□ 0.41
SCARF1-209ENST00000576012 ZSCAN20P17040 1043 aaPredicted RBP17.63■□□□□ 0.41
SCARF1-209ENST00000576012 CNPY2Q9Y2B0 182 aa17.63■□□□□ 0.41
SCARF1-209ENST00000576012 NEO1Q92859 1461 aa17.63■□□□□ 0.41
SCARF1-209ENST00000576012 KIDINS220Q9ULH0 1771 aa17.63■□□□□ 0.41
SCARF1-209ENST00000576012 U2AF2P26368 475 aaKnown RBP eCLIP17.62■□□□□ 0.41
SCARF1-209ENST00000576012 GIMAP6Q6P9H5 292 aa17.62■□□□□ 0.41
SCARF1-209ENST00000576012 PAXIP1Q6ZW49 1069 aaPredicted RBP17.62■□□□□ 0.41
SCARF1-209ENST00000576012 DDX54Q8TDD1 881 aaKnown RBP17.62■□□□□ 0.41
SCARF1-209ENST00000576012 MAPK8IP2Q13387 824 aaPredicted RBP17.62■□□□□ 0.41
SCARF1-209ENST00000576012 TSPOAP1O95153 1857 aa17.61■□□□□ 0.41
SCARF1-209ENST00000576012 CEP85Q6P2H3 762 aa17.61■□□□□ 0.41
SCARF1-209ENST00000576012 KIF3AQ9Y496 699 aa17.61■□□□□ 0.41
SCARF1-209ENST00000576012 MCM10Q7L590 875 aa17.61■□□□□ 0.41
SCARF1-209ENST00000576012 HDGFL2Q7Z4V5 671 aaPredicted RBP17.61■□□□□ 0.41
SCARF1-209ENST00000576012 MTERF4Q7Z6M4 381 aaKnown RBP17.61■□□□□ 0.41
SCARF1-209ENST00000576012 POLKQ9UBT6 870 aa17.61■□□□□ 0.41
SCARF1-209ENST00000576012 MCM5P33992 734 aa17.6■□□□□ 0.41
SCARF1-209ENST00000576012 DHX37Q8IY37 1157 aaKnown RBP17.6■□□□□ 0.41
SCARF1-209ENST00000576012 SYAP1Q96A49 352 aaPredicted RBP17.6■□□□□ 0.41
SCARF1-209ENST00000576012 BCL2L12Q9HB09 334 aa17.6■□□□□ 0.41
SCARF1-209ENST00000576012 ABCC4O15439 1325 aa17.6■□□□□ 0.41
SCARF1-209ENST00000576012 MAP3K4Q9Y6R4 1608 aa17.59■□□□□ 0.41
SCARF1-209ENST00000576012 BRD1O95696 1058 aa17.59■□□□□ 0.41
SCARF1-209ENST00000576012 ANKRD44Q8N8A2 993 aa17.59■□□□□ 0.41
SCARF1-209ENST00000576012 HECW2Q9P2P5 1572 aa17.58■□□□□ 0.41
SCARF1-209ENST00000576012 CPA1P15085 419 aa17.58■□□□□ 0.41
SCARF1-209ENST00000576012 DMTNQ08495 405 aa17.58■□□□□ 0.41
SCARF1-209ENST00000576012 DIP2BQ9P265 1576 aa17.58■□□□□ 0.4
SCARF1-209ENST00000576012 PDCL2Q8N4E4 241 aa17.58■□□□□ 0.4
SCARF1-209ENST00000576012 PYCARDQ9ULZ3 195 aa17.58■□□□□ 0.4
SCARF1-209ENST00000576012 FBXO31Q5XUX0 539 aaPredicted RBP17.57■□□□□ 0.4
SCARF1-209ENST00000576012 CDK19Q9BWU1 502 aa17.57■□□□□ 0.4
SCARF1-209ENST00000576012 SBNO2Q9Y2G9 1366 aa17.57■□□□□ 0.4
SCARF1-209ENST00000576012 NUTM2FA1L443 756 aa17.57■□□□□ 0.4
SCARF1-209ENST00000576012 SLC4A2P04920 1241 aa17.57■□□□□ 0.4
SCARF1-209ENST00000576012 PDE1AP54750 535 aa17.57■□□□□ 0.4
SCARF1-209ENST00000576012 PIBF1Q8WXW3 757 aa17.57■□□□□ 0.4
SCARF1-209ENST00000576012 ARHGAP45Q92619 1136 aa17.57■□□□□ 0.4
SCARF1-209ENST00000576012 IL1RAPL2Q9NP60 686 aa17.57■□□□□ 0.4
SCARF1-209ENST00000576012 MLH3Q9UHC1 1453 aa17.57■□□□□ 0.4
SCARF1-209ENST00000576012 AEBP1Q8IUX7 1158 aa17.56■□□□□ 0.4
SCARF1-209ENST00000576012 RIOK3O14730 519 aaKnown RBP17.56■□□□□ 0.4
SCARF1-209ENST00000576012 NAA30Q147X3 362 aaPredicted RBP17.56■□□□□ 0.4
SCARF1-209ENST00000576012 NME9Q86XW9 330 aa17.56■□□□□ 0.4
SCARF1-209ENST00000576012 WAPLQ7Z5K2 1190 aa17.55■□□□□ 0.4
SCARF1-209ENST00000576012 IFT57Q9NWB7 429 aa17.55■□□□□ 0.4
SCARF1-209ENST00000576012 CAMK4Q16566 473 aa17.55■□□□□ 0.4
SCARF1-209ENST00000576012 UNC5CLQ8IV45 518 aa17.55■□□□□ 0.4
SCARF1-209ENST00000576012 SRCIN1Q9C0H9 1055 aa17.55■□□□□ 0.4
SCARF1-209ENST00000576012 GLI2P10070 1586 aa17.55■□□□□ 0.4
SCARF1-209ENST00000576012 NCKAP5LQ9HCH0 1330 aa17.55■□□□□ 0.4
SCARF1-209ENST00000576012 IDI1Q13907 227 aa17.55■□□□□ 0.4
SCARF1-209ENST00000576012 MSH6P52701 1360 aa17.54■□□□□ 0.4
SCARF1-209ENST00000576012 VGFO15240 615 aaPredicted RBP17.54■□□□□ 0.4
SCARF1-209ENST00000576012 G2E3Q7L622 706 aa17.54■□□□□ 0.4
SCARF1-209ENST00000576012 DRC7Q8IY82 874 aa17.54■□□□□ 0.4
SCARF1-209ENST00000576012 MCCP23508 829 aa17.54■□□□□ 0.4
SCARF1-209ENST00000576012 CFAP44Q96MT7 982 aa17.54■□□□□ 0.4
SCARF1-209ENST00000576012 ZNF771Q7L3S4 317 aaPredicted RBP17.53■□□□□ 0.4
SCARF1-209ENST00000576012 ZNF592Q92610 1267 aa17.53■□□□□ 0.4
SCARF1-209ENST00000576012 IL25Q9H293 177 aa17.53■□□□□ 0.4
SCARF1-209ENST00000576012 PHF14O94880 888 aa17.53■□□□□ 0.4
SCARF1-209ENST00000576012 DEPDC5O75140 1603 aa17.53■□□□□ 0.4
SCARF1-209ENST00000576012 ZBTB22O15209 634 aa17.53■□□□□ 0.4
SCARF1-209ENST00000576012 AP5Z1O43299 807 aa17.53■□□□□ 0.4
SCARF1-209ENST00000576012 CHAF1AQ13111 956 aaPredicted RBP17.53■□□□□ 0.4
SCARF1-209ENST00000576012 TULP1O00294 542 aaPredicted RBP17.52■□□□□ 0.4
SCARF1-209ENST00000576012 C16orf45Q96MC5 204 aaPredicted RBP17.52■□□□□ 0.4
SCARF1-209ENST00000576012 ESYT1Q9BSJ8 1104 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms