RNA–Protein interactions for RNA: ENST00000575957.1

EIF4A3-205, Transcript of eukaryotic translation initiation factor 4A3, humanhuman

TSL 2

Gene EIF4A3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A3-205ENST00000575957 DOT1LQ8TEK3 1739 aa23.53■■□□□ 1.36
EIF4A3-205ENST00000575957 ANKRD36BQ8N2N9 1353 aa23.52■■□□□ 1.36
EIF4A3-205ENST00000575957 PRIM1P49642 420 aaKnown RBP23.52■■□□□ 1.36
EIF4A3-205ENST00000575957 NSD2O96028 1365 aa23.52■■□□□ 1.36
EIF4A3-205ENST00000575957 LY75O60449 1722 aa23.5■■□□□ 1.35
EIF4A3-205ENST00000575957 NLGN2Q8NFZ4 835 aa23.5■■□□□ 1.35
EIF4A3-205ENST00000575957 SHANK3Q9BYB0 1731 aa23.49■■□□□ 1.35
EIF4A3-205ENST00000575957 MAP3K19Q56UN5 1328 aa23.49■■□□□ 1.35
EIF4A3-205ENST00000575957 HOXC9P31274 260 aa23.48■■□□□ 1.35
EIF4A3-205ENST00000575957 MEGF6O75095 1541 aa23.48■■□□□ 1.35
EIF4A3-205ENST00000575957 FBLN1P23142 703 aa23.47■■□□□ 1.35
EIF4A3-205ENST00000575957 PUS7Q96PZ0 661 aaKnown RBP23.47■■□□□ 1.35
EIF4A3-205ENST00000575957 CLSPNQ9HAW4 1339 aa23.47■■□□□ 1.35
EIF4A3-205ENST00000575957 GOLGB1Q14789 3259 aaKnown RBP23.47■■□□□ 1.35
EIF4A3-205ENST00000575957 RGPD2P0DJD1 1756 aa23.47■■□□□ 1.35
EIF4A3-205ENST00000575957 GIGYF1O75420 1035 aaPredicted RBP23.46■■□□□ 1.35
EIF4A3-205ENST00000575957 ZCRB1Q8TBF4 217 aaKnown RBP23.46■■□□□ 1.35
EIF4A3-205ENST00000575957 COG3Q96JB2 828 aa23.46■■□□□ 1.35
EIF4A3-205ENST00000575957 CCNL1Q9UK58 526 aaPredicted RBP23.46■■□□□ 1.35
EIF4A3-205ENST00000575957 AMPHP49418 695 aa23.45■■□□□ 1.34
EIF4A3-205ENST00000575957 MSH5O43196 834 aa23.42■■□□□ 1.34
EIF4A3-205ENST00000575957 YBX3P16989 372 aaKnown RBP eCLIP23.42■■□□□ 1.344e-8■□□□□ 10
EIF4A3-205ENST00000575957 COL23A1Q86Y22 540 aaPredicted RBP23.42■■□□□ 1.34
EIF4A3-205ENST00000575957 USP47Q96K76 1375 aa23.41■■□□□ 1.34
EIF4A3-205ENST00000575957 TESK2Q96S53 571 aa23.4■■□□□ 1.34
EIF4A3-205ENST00000575957 RTL1A6NKG5 1358 aa23.4■■□□□ 1.34
EIF4A3-205ENST00000575957 NBPF6Q5VWK0 638 aa23.39■■□□□ 1.33
EIF4A3-205ENST00000575957 USHBP1Q8N6Y0 703 aa23.39■■□□□ 1.33
EIF4A3-205ENST00000575957 NBPF4Q96M43 638 aa23.39■■□□□ 1.33
EIF4A3-205ENST00000575957 GRIN3BO60391 1043 aa23.38■■□□□ 1.33
EIF4A3-205ENST00000575957 RRS1Q15050 365 aaKnown RBP23.38■■□□□ 1.33
EIF4A3-205ENST00000575957 MSL1Q68DK7 614 aa23.38■■□□□ 1.33
EIF4A3-205ENST00000575957 CCER1Q8TC90 406 aaPredicted RBP23.37■■□□□ 1.33
EIF4A3-205ENST00000575957 ST20-MTHFSA0A0A6YYL1 179 aa23.36■■□□□ 1.33
EIF4A3-205ENST00000575957 CGNL1Q0VF96 1302 aa23.35■■□□□ 1.33
EIF4A3-205ENST00000575957 C5P01031 1676 aa23.35■■□□□ 1.33
EIF4A3-205ENST00000575957 TIMELESSQ9UNS1 1208 aa23.35■■□□□ 1.33
EIF4A3-205ENST00000575957 RAPGEF4Q8WZA2 1011 aa23.34■■□□□ 1.33
EIF4A3-205ENST00000575957 SMG6Q86US8 1419 aaKnown RBP23.33■■□□□ 1.33
EIF4A3-205ENST00000575957 GGNBP2Q9H3C7 697 aa23.32■■□□□ 1.32
EIF4A3-205ENST00000575957 ATP10DQ9P241 1426 aa23.32■■□□□ 1.32
EIF4A3-205ENST00000575957 PALLDQ8WX93 1383 aa23.31■■□□□ 1.32
EIF4A3-205ENST00000575957 FYB1O15117 783 aa23.31■■□□□ 1.32
EIF4A3-205ENST00000575957 TATP17735 454 aaPredicted RBP23.31■■□□□ 1.32
EIF4A3-205ENST00000575957 PCDH11XQ9BZA7 1347 aa23.31■■□□□ 1.32
EIF4A3-205ENST00000575957 PCDH11YQ9BZA8 1340 aa23.31■■□□□ 1.32
EIF4A3-205ENST00000575957 CD2APQ9Y5K6 639 aa23.3■■□□□ 1.32
EIF4A3-205ENST00000575957 TAF1LQ8IZX4 1826 aa23.29■■□□□ 1.32
EIF4A3-205ENST00000575957 HSP90AB2PQ58FF8 381 aa23.28■■□□□ 1.32
EIF4A3-205ENST00000575957 MPRIPQ6WCQ1 1025 aa23.28■■□□□ 1.32
EIF4A3-205ENST00000575957 FLAD1Q8NFF5 587 aa23.28■■□□□ 1.32
EIF4A3-205ENST00000575957 INSRP06213 1382 aa23.27■■□□□ 1.31
EIF4A3-205ENST00000575957 TOGARAM1Q9Y4F4 1720 aa23.26■■□□□ 1.31
EIF4A3-205ENST00000575957 SLC24A1O60721 1099 aa23.26■■□□□ 1.31
EIF4A3-205ENST00000575957 C4BP0C0L5 1744 aa23.25■■□□□ 1.31
EIF4A3-205ENST00000575957 CYP27B1O15528 508 aa23.25■■□□□ 1.31
EIF4A3-205ENST00000575957 AMIGO3Q86WK7 504 aa23.25■■□□□ 1.31
EIF4A3-205ENST00000575957 FLT4P35916 1363 aa23.25■■□□□ 1.31
EIF4A3-205ENST00000575957 CEP350Q5VT06 3117 aa23.23■■□□□ 1.31
EIF4A3-205ENST00000575957 HMGB2P26583 209 aaKnown RBP23.23■■□□□ 1.31
EIF4A3-205ENST00000575957 IFFO2Q5TF58 517 aa23.23■■□□□ 1.31
EIF4A3-205ENST00000575957 AK7Q96M32 723 aa23.23■■□□□ 1.31
EIF4A3-205ENST00000575957 GPBP1L1Q9HC44 474 aaPredicted RBP23.23■■□□□ 1.31
EIF4A3-205ENST00000575957 ADCY9O60503 1353 aa23.23■■□□□ 1.31
EIF4A3-205ENST00000575957 ITGB4P16144 1822 aa23.22■■□□□ 1.31
EIF4A3-205ENST00000575957 KIF20BQ96Q89 1820 aa23.22■■□□□ 1.31
EIF4A3-205ENST00000575957 PHF14O94880 888 aa23.21■■□□□ 1.31
EIF4A3-205ENST00000575957 TMF1P82094 1093 aa23.21■■□□□ 1.31
EIF4A3-205ENST00000575957 SMIM5Q71RC9 77 aa23.21■■□□□ 1.31
EIF4A3-205ENST00000575957 SMARCC1Q92922 1105 aaPredicted RBP23.21■■□□□ 1.31
EIF4A3-205ENST00000575957 KIF24Q5T7B8 1368 aa23.21■■□□□ 1.31
EIF4A3-205ENST00000575957 UBR3Q6ZT12 1888 aa23.2■■□□□ 1.3
EIF4A3-205ENST00000575957 PKD1L3Q7Z443 1732 aa23.2■■□□□ 1.3
EIF4A3-205ENST00000575957 IGSF1Q8N6C5 1336 aa23.19■■□□□ 1.3
EIF4A3-205ENST00000575957 ZNF526Q8TF50 670 aaPredicted RBP23.19■■□□□ 1.3
EIF4A3-205ENST00000575957 PIGBQ92521 554 aa23.19■■□□□ 1.3
EIF4A3-205ENST00000575957 WWC3Q9ULE0 1092 aa23.19■■□□□ 1.3
EIF4A3-205ENST00000575957 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.18■■□□□ 1.3
EIF4A3-205ENST00000575957 EMILIN1Q9Y6C2 1016 aa23.18■■□□□ 1.3
EIF4A3-205ENST00000575957 NSD3Q9BZ95 1437 aa23.16■■□□□ 1.3
EIF4A3-205ENST00000575957 NCAPD2Q15021 1401 aa23.16■■□□□ 1.3
EIF4A3-205ENST00000575957 MAP2P11137 1827 aaKnown RBP23.15■■□□□ 1.3
EIF4A3-205ENST00000575957 LINC00116Q8NCU8 138 aa23.15■■□□□ 1.3
EIF4A3-205ENST00000575957 SSFA2P28290 1259 aa23.14■■□□□ 1.29
EIF4A3-205ENST00000575957 NKX1-1Q15270 411 aaPredicted RBP23.14■■□□□ 1.29
EIF4A3-205ENST00000575957 LOC102724428A0A0B4J2F2 783 aa23.13■■□□□ 1.29
EIF4A3-205ENST00000575957 HSPA6P17066 643 aa23.13■■□□□ 1.29
EIF4A3-205ENST00000575957 SIK1P57059 783 aa23.13■■□□□ 1.29
EIF4A3-205ENST00000575957 CARD14Q9BXL6 1004 aa23.12■■□□□ 1.29
EIF4A3-205ENST00000575957 SPG7Q9UQ90 795 aa23.12■■□□□ 1.29
EIF4A3-205ENST00000575957 PPM1GO15355 546 aaPredicted RBP23.11■■□□□ 1.29
EIF4A3-205ENST00000575957 ITPK1Q13572 414 aa23.1■■□□□ 1.29
EIF4A3-205ENST00000575957 TMOD3Q9NYL9 352 aa23.1■■□□□ 1.29
EIF4A3-205ENST00000575957 ANKRD26Q9UPS8 1709 aa23.09■■□□□ 1.29
EIF4A3-205ENST00000575957 GNPATO15228 680 aa23.09■■□□□ 1.29
EIF4A3-205ENST00000575957 CDCA8Q53HL2 280 aa23.09■■□□□ 1.29
EIF4A3-205ENST00000575957 ASAP1Q9ULH1 1129 aa23.09■■□□□ 1.29
EIF4A3-205ENST00000575957 EYA1Q99502 592 aa23.08■■□□□ 1.29
EIF4A3-205ENST00000575957 ATP6V1AP38606 617 aa23.07■■□□□ 1.28
EIF4A3-205ENST00000575957 CICQ96RK0 1608 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms