RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-222	ENST00000575909	ATP2B4	P23634	1241 aa		10.82	□□□□□ -0.68
TOM1L1-222	ENST00000575909	PSME1	Q06323	249 aa		10.81	□□□□□ -0.68
TOM1L1-222	ENST00000575909	CCDC27	Q2M243	656 aa		10.81	□□□□□ -0.68
TOM1L1-222	ENST00000575909	PLA2G2C	Q5R387	149 aa		10.81	□□□□□ -0.68
TOM1L1-222	ENST00000575909	VASH1	Q7L8A9	365 aa	Predicted RBP	10.81	□□□□□ -0.68
TOM1L1-222	ENST00000575909	MTMR7	Q9Y216	660 aa		10.81	□□□□□ -0.68
TOM1L1-222	ENST00000575909	MYC	P01106	439 aa	Predicted RBP	10.8	□□□□□ -0.68
TOM1L1-222	ENST00000575909	SKOR1	P84550	965 aa		10.8	□□□□□ -0.68
TOM1L1-222	ENST00000575909	TPCN2	Q8NHX9	752 aa		10.8	□□□□□ -0.68
TOM1L1-222	ENST00000575909	RNF166	Q96A37	237 aa	Predicted RBP	10.8	□□□□□ -0.68
TOM1L1-222	ENST00000575909	TRIM52	Q96A61	297 aa		10.8	□□□□□ -0.68
TOM1L1-222	ENST00000575909	CD2BP2	O95400	341 aa	Known RBP	10.79	□□□□□ -0.68
TOM1L1-222	ENST00000575909	C1orf216	Q8TAB5	229 aa		10.79	□□□□□ -0.68
TOM1L1-222	ENST00000575909	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	10.79	□□□□□ -0.68
TOM1L1-222	ENST00000575909	RAB15	P59190	212 aa		10.78	□□□□□ -0.68
TOM1L1-222	ENST00000575909	PPP1R18	Q6NYC8	613 aa		10.78	□□□□□ -0.68
TOM1L1-222	ENST00000575909	EHBP1	Q8NDI1	1231 aa		10.78	□□□□□ -0.68
TOM1L1-222	ENST00000575909	INTS6L	Q5JSJ4	861 aa	Known RBP	10.77	□□□□□ -0.69
TOM1L1-222	ENST00000575909	CDK15	Q96Q40	435 aa		10.77	□□□□□ -0.69
TOM1L1-222	ENST00000575909	SFI1	A8K8P3	1242 aa		10.76	□□□□□ -0.69
TOM1L1-222	ENST00000575909	ESF1	Q9H501	851 aa	Known RBP	10.76	□□□□□ -0.69
TOM1L1-222	ENST00000575909		M0R2N6	131 aa		10.75	□□□□□ -0.69
TOM1L1-222	ENST00000575909	ERVH48-1	M5A8F1	160 aa		10.75	□□□□□ -0.69
TOM1L1-222	ENST00000575909	MPND	Q8N594	471 aa		10.75	□□□□□ -0.69
TOM1L1-222	ENST00000575909	PRMT3	O60678	531 aa		10.74	□□□□□ -0.69
TOM1L1-222	ENST00000575909	ERVK-9	P63128	1117 aa		10.74	□□□□□ -0.69
TOM1L1-222	ENST00000575909	DHX9	Q08211	1270 aa	Known RBP	10.74	□□□□□ -0.69
TOM1L1-222	ENST00000575909	OCLN	Q16625	522 aa		10.74	□□□□□ -0.69
TOM1L1-222	ENST00000575909	RC3H1	Q5TC82	1133 aa	Known RBP	10.74	□□□□□ -0.69
TOM1L1-222	ENST00000575909	CXXC1	Q9P0U4	656 aa	Predicted RBP	10.74	□□□□□ -0.69
TOM1L1-222	ENST00000575909	ARID5B	Q14865	1188 aa		10.73	□□□□□ -0.69
TOM1L1-222	ENST00000575909	CC2D2B	Q6DHV5	1058 aa		10.73	□□□□□ -0.69
TOM1L1-222	ENST00000575909	HINFP	Q9BQA5	517 aa		10.73	□□□□□ -0.69
TOM1L1-222	ENST00000575909	SCTR	P47872	440 aa		10.72	□□□□□ -0.69
TOM1L1-222	ENST00000575909	TAS1R3	Q7RTX0	852 aa		10.72	□□□□□ -0.69
TOM1L1-222	ENST00000575909	FSHR	P23945	695 aa		10.71	□□□□□ -0.69
TOM1L1-222	ENST00000575909	PRIMPOL	Q96LW4	560 aa		10.71	□□□□□ -0.69
TOM1L1-222	ENST00000575909	SOWAHD	A6NJG2	315 aa		10.7	□□□□□ -0.7
TOM1L1-222	ENST00000575909	GRM5	P41594	1212 aa		10.7	□□□□□ -0.7
TOM1L1-222	ENST00000575909	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.7	□□□□□ -0.7
TOM1L1-222	ENST00000575909	SPNS2	Q8IVW8	549 aa		10.7	□□□□□ -0.7
TOM1L1-222	ENST00000575909	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.7	□□□□□ -0.7
TOM1L1-222	ENST00000575909	LIAT1	Q6ZQX7	453 aa		10.69	□□□□□ -0.7
TOM1L1-222	ENST00000575909	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	10.69	□□□□□ -0.7
TOM1L1-222	ENST00000575909	TSEN2	Q8NCE0	465 aa	Known RBP	10.69	□□□□□ -0.7
TOM1L1-222	ENST00000575909	WASL	O00401	505 aa	Predicted RBP	10.68	□□□□□ -0.7
TOM1L1-222	ENST00000575909	SIAH2	O43255	324 aa		10.68	□□□□□ -0.7
TOM1L1-222	ENST00000575909	ADH1C	P00326	375 aa		10.68	□□□□□ -0.7
TOM1L1-222	ENST00000575909	WEE1	P30291	646 aa		10.68	□□□□□ -0.7
TOM1L1-222	ENST00000575909	SERPINB4	P48594	390 aa		10.68	□□□□□ -0.7
TOM1L1-222	ENST00000575909	OSBPL3	Q9H4L5	887 aa		10.68	□□□□□ -0.7
TOM1L1-222	ENST00000575909	ZNF358	Q9NW07	568 aa		10.68	□□□□□ -0.7
TOM1L1-222	ENST00000575909	EGFL7	Q9UHF1	273 aa		10.68	□□□□□ -0.7
TOM1L1-222	ENST00000575909	AMOTL2	Q9Y2J4	779 aa		10.68	□□□□□ -0.7
TOM1L1-222	ENST00000575909	BACH1	O14867	736 aa		10.67	□□□□□ -0.7
TOM1L1-222	ENST00000575909	NR5A1	Q13285	461 aa		10.67	□□□□□ -0.7
TOM1L1-222	ENST00000575909	CCDC116	Q8IYX3	515 aa		10.67	□□□□□ -0.7
TOM1L1-222	ENST00000575909	CYLD	Q9NQC7	956 aa		10.67	□□□□□ -0.7
TOM1L1-222	ENST00000575909	TMPRSS4	Q9NRS4	437 aa		10.67	□□□□□ -0.7
TOM1L1-222	ENST00000575909	TLL2	Q9Y6L7	1015 aa		10.67	□□□□□ -0.7
TOM1L1-222	ENST00000575909	TMEM229A	B2RXF0	380 aa		10.66	□□□□□ -0.7
TOM1L1-222	ENST00000575909	WNT7A	O00755	349 aa		10.66	□□□□□ -0.7
TOM1L1-222	ENST00000575909	SCNN1A	P37088	669 aa		10.66	□□□□□ -0.7
TOM1L1-222	ENST00000575909	MYT1	Q01538	1121 aa		10.66	□□□□□ -0.7
TOM1L1-222	ENST00000575909	SCNN1D	P51172	638 aa		10.65	□□□□□ -0.7
TOM1L1-222	ENST00000575909	GDF10	P55107	478 aa		10.65	□□□□□ -0.7
TOM1L1-222	ENST00000575909	IFFO2	Q5TF58	517 aa		10.65	□□□□□ -0.7
TOM1L1-222	ENST00000575909	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.65	□□□□□ -0.7
TOM1L1-222	ENST00000575909	PTCD1	O75127	700 aa	Known RBP	10.64	□□□□□ -0.71
TOM1L1-222	ENST00000575909	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	10.64	□□□□□ -0.71
TOM1L1-222	ENST00000575909	CYP2U1	Q7Z449	544 aa		10.64	□□□□□ -0.71
TOM1L1-222	ENST00000575909	EMID1	Q96A84	441 aa	Predicted RBP	10.64	□□□□□ -0.71
TOM1L1-222	ENST00000575909	LILRA1	O75019	489 aa		10.63	□□□□□ -0.71
TOM1L1-222	ENST00000575909	LGR5	O75473	907 aa		10.63	□□□□□ -0.71
TOM1L1-222	ENST00000575909	INHA	P05111	366 aa		10.63	□□□□□ -0.71
TOM1L1-222	ENST00000575909	ERCC3	P19447	782 aa		10.63	□□□□□ -0.71
TOM1L1-222	ENST00000575909	IGFBP4	P22692	258 aa		10.63	□□□□□ -0.71
TOM1L1-222	ENST00000575909	SLC19A1	P41440	591 aa		10.63	□□□□□ -0.71
TOM1L1-222	ENST00000575909	COL26A1	Q96A83	441 aa		10.63	□□□□□ -0.71
TOM1L1-222	ENST00000575909	MRGPRX2	Q96LB1	330 aa		10.63	□□□□□ -0.71
TOM1L1-222	ENST00000575909	PGPEP1	Q9NXJ5	209 aa		10.63	□□□□□ -0.71
TOM1L1-222	ENST00000575909	GNRH1	P01148	92 aa		10.62	□□□□□ -0.71
TOM1L1-222	ENST00000575909	BIN2	Q9UBW5	565 aa	Predicted RBP	10.62	□□□□□ -0.71
TOM1L1-222	ENST00000575909	FOXO3	O43524	673 aa		10.61	□□□□□ -0.71
TOM1L1-222	ENST00000575909	ABL1	P00519	1130 aa		10.61	□□□□□ -0.71
TOM1L1-222	ENST00000575909	RBM25	P49756	843 aa	Known RBP	10.61	□□□□□ -0.71
TOM1L1-222	ENST00000575909	FKBP5	Q13451	457 aa	Predicted RBP	10.61	□□□□□ -0.71
TOM1L1-222	ENST00000575909	ESCO1	Q5FWF5	840 aa		10.61	□□□□□ -0.71
TOM1L1-222	ENST00000575909	GAS2L2	Q8NHY3	880 aa		10.61	□□□□□ -0.71
TOM1L1-222	ENST00000575909	ETNK1	Q9HBU6	452 aa		10.61	□□□□□ -0.71
TOM1L1-222	ENST00000575909	EMILIN1	Q9Y6C2	1016 aa		10.61	□□□□□ -0.71
TOM1L1-222	ENST00000575909	ICMT	O60725	284 aa		10.6	□□□□□ -0.71
TOM1L1-222	ENST00000575909	GTF3C2	Q8WUA4	911 aa	Predicted RBP	10.6	□□□□□ -0.71
TOM1L1-222	ENST00000575909	SLC4A9	Q96Q91	983 aa		10.6	□□□□□ -0.71
TOM1L1-222	ENST00000575909	MKNK1	Q9BUB5	465 aa		10.6	□□□□□ -0.71
TOM1L1-222	ENST00000575909	NR3C2	P08235	984 aa		10.59	□□□□□ -0.71
TOM1L1-222	ENST00000575909	TNS4	Q8IZW8	715 aa		10.59	□□□□□ -0.71
TOM1L1-222	ENST00000575909	SEPT3	Q9UH03	358 aa		10.59	□□□□□ -0.71
TOM1L1-222	ENST00000575909	STAU1	O95793	577 aa	Known RBP	10.58	□□□□□ -0.72
TOM1L1-222	ENST00000575909	EPHA4	P54764	986 aa		10.58	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms