RNA–Protein interactions for RNA: ENST00000575815.5

NCBP3-205, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 4,096 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-205ENST00000575815 PDE4AP27815 886 aa10.42□□□□□ -0.74
NCBP3-205ENST00000575815 ZCRB1Q8TBF4 217 aaKnown RBP10.42□□□□□ -0.74
NCBP3-205ENST00000575815 SETD1BQ9UPS6 1966 aaKnown RBP10.42□□□□□ -0.74
NCBP3-205ENST00000575815 SBNO1A3KN83 1393 aa10.42□□□□□ -0.74
NCBP3-205ENST00000575815 RILPL2Q969X0 211 aa10.42□□□□□ -0.74
NCBP3-205ENST00000575815 ACSBG1Q96GR2 724 aa10.41□□□□□ -0.74
NCBP3-205ENST00000575815 PIK3R4Q99570 1358 aa10.41□□□□□ -0.74
NCBP3-205ENST00000575815 CCDC27Q2M243 656 aa10.41□□□□□ -0.74
NCBP3-205ENST00000575815 SURF6O75683 361 aaKnown RBP10.4□□□□□ -0.74
NCBP3-205ENST00000575815 BRINP3Q76B58 766 aa10.4□□□□□ -0.74
NCBP3-205ENST00000575815 SRCIN1Q9C0H9 1055 aa10.4□□□□□ -0.74
NCBP3-205ENST00000575815 PREX1Q8TCU6 1659 aa10.4□□□□□ -0.74
NCBP3-205ENST00000575815 CCDC85AQ96PX6 553 aaPredicted RBP10.4□□□□□ -0.75
NCBP3-205ENST00000575815 PDZRN3Q9UPQ7 1066 aa10.4□□□□□ -0.75
NCBP3-205ENST00000575815 BECN1Q14457 450 aa10.39□□□□□ -0.75
NCBP3-205ENST00000575815 DEPDC5O75140 1603 aa10.39□□□□□ -0.75
NCBP3-205ENST00000575815 VAMP4O75379 141 aa10.39□□□□□ -0.75
NCBP3-205ENST00000575815 GNAI3P08754 354 aa10.39□□□□□ -0.75
NCBP3-205ENST00000575815 RLBP1P12271 317 aa10.39□□□□□ -0.75
NCBP3-205ENST00000575815 FLIIQ13045 1269 aa10.39□□□□□ -0.75
NCBP3-205ENST00000575815 AKAP4Q5JQC9 854 aa10.39□□□□□ -0.75
NCBP3-205ENST00000575815 ARHGEF25Q86VW2 580 aa10.39□□□□□ -0.75
NCBP3-205ENST00000575815 PTPRUQ92729 1446 aa10.39□□□□□ -0.75
NCBP3-205ENST00000575815 IL2RBP14784 551 aa10.38□□□□□ -0.75
NCBP3-205ENST00000575815 JARID2Q92833 1246 aaPredicted RBP10.38□□□□□ -0.75
NCBP3-205ENST00000575815 GNAI2P04899 355 aa10.38□□□□□ -0.75
NCBP3-205ENST00000575815 SIL1Q9H173 461 aa10.38□□□□□ -0.75
NCBP3-205ENST00000575815 RIMS1Q86UR5 1692 aaKnown RBP10.38□□□□□ -0.75
NCBP3-205ENST00000575815 PI4KAP2A4QPH2 592 aa10.38□□□□□ -0.75
NCBP3-205ENST00000575815 ALDH1L2Q3SY69 923 aa10.38□□□□□ -0.75
NCBP3-205ENST00000575815 TPRNQ4KMQ1 711 aa10.38□□□□□ -0.75
NCBP3-205ENST00000575815 PI4KAP1Q8N8J0 262 aa10.38□□□□□ -0.75
NCBP3-205ENST00000575815 DDRGK1Q96HY6 314 aa10.38□□□□□ -0.75
NCBP3-205ENST00000575815 IL16Q14005 1332 aa10.38□□□□□ -0.75
NCBP3-205ENST00000575815 KIAA0232Q92628 1395 aa10.38□□□□□ -0.75
NCBP3-205ENST00000575815 G3BP1Q13283 466 aaKnown RBP eCLIP10.37□□□□□ -0.75
NCBP3-205ENST00000575815 PHF23Q9BUL5 403 aaPredicted RBP10.37□□□□□ -0.75
NCBP3-205ENST00000575815 TULP4Q9NRJ4 1543 aa10.37□□□□□ -0.75
NCBP3-205ENST00000575815 CHPF2Q9P2E5 772 aa10.37□□□□□ -0.75
NCBP3-205ENST00000575815 ATP7BP35670 1465 aa10.37□□□□□ -0.75
NCBP3-205ENST00000575815 CCT4P50991 539 aaKnown RBP10.37□□□□□ -0.75
NCBP3-205ENST00000575815 LARP1Q6PKG0 1096 aaKnown RBP10.37□□□□□ -0.75
NCBP3-205ENST00000575815 ZBTB3Q9H5J0 574 aa10.37□□□□□ -0.75
NCBP3-205ENST00000575815 EXOC6BQ9Y2D4 811 aa10.37□□□□□ -0.75
NCBP3-205ENST00000575815 AXIN2Q9Y2T1 843 aa10.37□□□□□ -0.75
NCBP3-205ENST00000575815 SPATA31D1Q6ZQQ2 1576 aa10.36□□□□□ -0.75
NCBP3-205ENST00000575815 SLC4A3P48751 1232 aa10.36□□□□□ -0.75
NCBP3-205ENST00000575815 FMNL2Q96PY5 1086 aa10.36□□□□□ -0.75
NCBP3-205ENST00000575815 PLEKHF1Q96S99 279 aa10.36□□□□□ -0.75
NCBP3-205ENST00000575815 MROH2AA6NES4 1674 aa10.36□□□□□ -0.75
NCBP3-205ENST00000575815 ATP5J2-PTCD1G3V325 749 aa10.36□□□□□ -0.75
NCBP3-205ENST00000575815 FGD1P98174 961 aa10.36□□□□□ -0.75
NCBP3-205ENST00000575815 DDB1Q16531 1140 aa10.36□□□□□ -0.75
NCBP3-205ENST00000575815 FAM161AQ3B820 660 aa10.36□□□□□ -0.75
NCBP3-205ENST00000575815 IL17REQ8NFR9 667 aa10.36□□□□□ -0.75
NCBP3-205ENST00000575815 DBF4Q9UBU7 674 aaPredicted RBP10.36□□□□□ -0.75
NCBP3-205ENST00000575815 NAP1L2Q9ULW6 460 aaPredicted RBP10.36□□□□□ -0.75
NCBP3-205ENST00000575815 SRGAP3O43295 1099 aa10.36□□□□□ -0.75
NCBP3-205ENST00000575815 BICDL1Q6ZP65 573 aa10.36□□□□□ -0.75
NCBP3-205ENST00000575815 KIAA1211Q6ZU35 1233 aa10.36□□□□□ -0.75
NCBP3-205ENST00000575815 NEUROD6Q96NK8 337 aa10.36□□□□□ -0.75
NCBP3-205ENST00000575815 IL1RAPL2Q9NP60 686 aa10.35□□□□□ -0.75
NCBP3-205ENST00000575815 TMEM131LA2VDJ0 1609 aa10.35□□□□□ -0.75
NCBP3-205ENST00000575815 RNMTO43148 476 aaKnown RBP10.35□□□□□ -0.75
NCBP3-205ENST00000575815 KCNQ3O43525 872 aa10.35□□□□□ -0.75
NCBP3-205ENST00000575815 FRAT2O75474 233 aaPredicted RBP10.35□□□□□ -0.75
NCBP3-205ENST00000575815 IFIT2P09913 472 aaKnown RBP10.35□□□□□ -0.75
NCBP3-205ENST00000575815 KIF6Q6ZMV9 814 aa10.35□□□□□ -0.75
NCBP3-205ENST00000575815 ADGRB1O14514 1584 aa10.35□□□□□ -0.75
NCBP3-205ENST00000575815 G2E3Q7L622 706 aa10.35□□□□□ -0.75
NCBP3-205ENST00000575815 MAP3K5Q99683 1374 aa10.35□□□□□ -0.75
NCBP3-205ENST00000575815 STARD3NLO95772 234 aa10.34□□□□□ -0.75
NCBP3-205ENST00000575815 GPATCH3Q96I76 525 aa10.34□□□□□ -0.75
NCBP3-205ENST00000575815 MYD88Q99836 296 aa10.34□□□□□ -0.75
NCBP3-205ENST00000575815 PCDHB15Q9Y5E8 787 aa10.34□□□□□ -0.75
NCBP3-205ENST00000575815 ZC3H13Q5T200 1668 aaKnown RBP10.34□□□□□ -0.75
NCBP3-205ENST00000575815 IGHDP01880 384 aa10.34□□□□□ -0.75
NCBP3-205ENST00000575815 ARHGEF10O15013 1369 aa10.34□□□□□ -0.75
NCBP3-205ENST00000575815 NRXN1Q9ULB1 1477 aa10.34□□□□□ -0.75
NCBP3-205ENST00000575815 SETBP1Q9Y6X0 1596 aa10.34□□□□□ -0.75
NCBP3-205ENST00000575815 ADGRL3Q9HAR2 1447 aa10.34□□□□□ -0.75
NCBP3-205ENST00000575815 NOL8Q76FK4 1167 aaKnown RBP10.34□□□□□ -0.75
NCBP3-205ENST00000575815 SLKQ9H2G2 1235 aaPredicted RBP10.34□□□□□ -0.75
NCBP3-205ENST00000575815 PHAXQ9H814 394 aaKnown RBP10.34□□□□□ -0.75
NCBP3-205ENST00000575815 QRICH2Q9H0J4 1663 aa10.34□□□□□ -0.75
NCBP3-205ENST00000575815 GPTP24298 496 aa10.33□□□□□ -0.76
NCBP3-205ENST00000575815 DNAAF4Q8WXU2 420 aa10.33□□□□□ -0.76
NCBP3-205ENST00000575815 INSRP06213 1382 aa10.33□□□□□ -0.76
NCBP3-205ENST00000575815 AATKQ6ZMQ8 1374 aa10.33□□□□□ -0.76
NCBP3-205ENST00000575815 CHL1O00533 1208 aa10.33□□□□□ -0.76
NCBP3-205ENST00000575815 SNRPA1P09661 255 aaKnown RBP10.33□□□□□ -0.76
NCBP3-205ENST00000575815 COPS6Q7L5N1 327 aa10.33□□□□□ -0.76
NCBP3-205ENST00000575815 MRPL50Q8N5N7 158 aaKnown RBP10.33□□□□□ -0.76
NCBP3-205ENST00000575815 MEIS3Q99687 375 aa10.33□□□□□ -0.76
NCBP3-205ENST00000575815 MAP3K2Q9Y2U5 619 aa10.33□□□□□ -0.76
NCBP3-205ENST00000575815 FAM98CQ17RN3 349 aaKnown RBP10.33□□□□□ -0.76
NCBP3-205ENST00000575815 SMARCA5O60264 1052 aaPredicted RBP10.33□□□□□ -0.76
NCBP3-205ENST00000575815 LRRFIP2Q9Y608 721 aaKnown RBP10.33□□□□□ -0.76
NCBP3-205ENST00000575815 DCAF5Q96JK2 942 aa10.32□□□□□ -0.76
NCBP3-205ENST00000575815 HTATSF1O43719 755 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms