RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 MEGF6O75095 1541 aa29.41■■■□□ 2.3
SPNS3-203ENST00000575185 SLC16A10Q8TF71 515 aa29.41■■■□□ 2.3
SPNS3-203ENST00000575185 PRIM1P49642 420 aaKnown RBP29.4■■■□□ 2.3
SPNS3-203ENST00000575185 PELP1Q8IZL8 1130 aaKnown RBP29.4■■■□□ 2.3
SPNS3-203ENST00000575185 TFCP2L1Q9NZI6 479 aa29.4■■■□□ 2.3
SPNS3-203ENST00000575185 FBLN1P23142 703 aa29.39■■■□□ 2.3
SPNS3-203ENST00000575185 POLD1P28340 1107 aa29.39■■■□□ 2.3
SPNS3-203ENST00000575185 NLGN2Q8NFZ4 835 aa29.39■■■□□ 2.3
SPNS3-203ENST00000575185 MAP3K19Q56UN5 1328 aa29.39■■■□□ 2.3
SPNS3-203ENST00000575185 HOXC9P31274 260 aa29.36■■■□□ 2.29
SPNS3-203ENST00000575185 TRIM26Q12899 539 aaPredicted RBP29.34■■■□□ 2.29
SPNS3-203ENST00000575185 C5P01031 1676 aa29.33■■■□□ 2.29
SPNS3-203ENST00000575185 COG3Q96JB2 828 aa29.32■■■□□ 2.28
SPNS3-203ENST00000575185 AMPHP49418 695 aa29.31■■■□□ 2.28
SPNS3-203ENST00000575185 ZCRB1Q8TBF4 217 aaKnown RBP29.31■■■□□ 2.28
SPNS3-203ENST00000575185 CCNL1Q9UK58 526 aaPredicted RBP29.31■■■□□ 2.28
SPNS3-203ENST00000575185 CEP350Q5VT06 3117 aa29.31■■■□□ 2.28
SPNS3-203ENST00000575185 PUS7Q96PZ0 661 aaKnown RBP29.3■■■□□ 2.28
SPNS3-203ENST00000575185 TESK2Q96S53 571 aa29.29■■■□□ 2.28
SPNS3-203ENST00000575185 GIGYF1O75420 1035 aaPredicted RBP29.28■■■□□ 2.28
SPNS3-203ENST00000575185 TAF1LQ8IZX4 1826 aa29.28■■■□□ 2.28
SPNS3-203ENST00000575185 MSH5O43196 834 aa29.27■■■□□ 2.28
SPNS3-203ENST00000575185 YBX3P16989 372 aaKnown RBP eCLIP29.27■■■□□ 2.28
SPNS3-203ENST00000575185 COL23A1Q86Y22 540 aaPredicted RBP29.27■■■□□ 2.28
SPNS3-203ENST00000575185 USHBP1Q8N6Y0 703 aa29.27■■■□□ 2.28
SPNS3-203ENST00000575185 TONSLQ96HA7 1378 aa29.26■■■□□ 2.27
SPNS3-203ENST00000575185 USP47Q96K76 1375 aa29.26■■■□□ 2.27
SPNS3-203ENST00000575185 RRS1Q15050 365 aaKnown RBP29.25■■■□□ 2.27
SPNS3-203ENST00000575185 NBPF6Q5VWK0 638 aa29.25■■■□□ 2.27
SPNS3-203ENST00000575185 MSL1Q68DK7 614 aa29.25■■■□□ 2.27
SPNS3-203ENST00000575185 NBPF4Q96M43 638 aa29.25■■■□□ 2.27
SPNS3-203ENST00000575185 RTL1A6NKG5 1358 aa29.25■■■□□ 2.27
SPNS3-203ENST00000575185 TOGARAM1Q9Y4F4 1720 aa29.23■■■□□ 2.27
SPNS3-203ENST00000575185 ST20-MTHFSA0A0A6YYL1 179 aa29.23■■■□□ 2.27
SPNS3-203ENST00000575185 KIF20BQ96Q89 1820 aa29.22■■■□□ 2.27
SPNS3-203ENST00000575185 ITGB4P16144 1822 aa29.2■■■□□ 2.27
SPNS3-203ENST00000575185 GGNBP2Q9H3C7 697 aa29.19■■■□□ 2.26
SPNS3-203ENST00000575185 SMG6Q86US8 1419 aaKnown RBP29.17■■■□□ 2.26
SPNS3-203ENST00000575185 C4BP0C0L5 1744 aa29.17■■■□□ 2.26
SPNS3-203ENST00000575185 RAPGEF4Q8WZA2 1011 aa29.16■■■□□ 2.26
SPNS3-203ENST00000575185 FYB1O15117 783 aa29.15■■■□□ 2.26
SPNS3-203ENST00000575185 GRIN3BO60391 1043 aa29.15■■■□□ 2.26
SPNS3-203ENST00000575185 CGNL1Q0VF96 1302 aa29.15■■■□□ 2.26
SPNS3-203ENST00000575185 PALLDQ8WX93 1383 aa29.14■■■□□ 2.26
SPNS3-203ENST00000575185 ATP10DQ9P241 1426 aa29.14■■■□□ 2.26
SPNS3-203ENST00000575185 UBR3Q6ZT12 1888 aa29.14■■■□□ 2.26
SPNS3-203ENST00000575185 PKD1L3Q7Z443 1732 aa29.14■■■□□ 2.25
SPNS3-203ENST00000575185 TATP17735 454 aaPredicted RBP29.13■■■□□ 2.25
SPNS3-203ENST00000575185 HSP90AB2PQ58FF8 381 aa29.12■■■□□ 2.25
SPNS3-203ENST00000575185 PCDH11XQ9BZA7 1347 aa29.12■■■□□ 2.25
SPNS3-203ENST00000575185 PCDH11YQ9BZA8 1340 aa29.12■■■□□ 2.25
SPNS3-203ENST00000575185 MPRIPQ6WCQ1 1025 aa29.1■■■□□ 2.25
SPNS3-203ENST00000575185 AMIGO3Q86WK7 504 aa29.1■■■□□ 2.25
SPNS3-203ENST00000575185 INSRP06213 1382 aa29.1■■■□□ 2.25
SPNS3-203ENST00000575185 CYP27B1O15528 508 aa29.08■■■□□ 2.25
SPNS3-203ENST00000575185 SMIM5Q71RC9 77 aa29.08■■■□□ 2.25
SPNS3-203ENST00000575185 MAP2P11137 1827 aaKnown RBP29.07■■■□□ 2.24
SPNS3-203ENST00000575185 FLT4P35916 1363 aa29.07■■■□□ 2.24
SPNS3-203ENST00000575185 CD2APQ9Y5K6 639 aa29.07■■■□□ 2.24
SPNS3-203ENST00000575185 ADCY9O60503 1353 aa29.04■■■□□ 2.24
SPNS3-203ENST00000575185 WWC3Q9ULE0 1092 aa29.04■■■□□ 2.24
SPNS3-203ENST00000575185 FLAD1Q8NFF5 587 aa29.03■■■□□ 2.24
SPNS3-203ENST00000575185 ANKRD26Q9UPS8 1709 aa29.03■■■□□ 2.24
SPNS3-203ENST00000575185 PHF14O94880 888 aa29.02■■■□□ 2.24
SPNS3-203ENST00000575185 AK7Q96M32 723 aa29.02■■■□□ 2.24
SPNS3-203ENST00000575185 SLC24A1O60721 1099 aa29.01■■■□□ 2.23
SPNS3-203ENST00000575185 TMF1P82094 1093 aa29.01■■■□□ 2.23
SPNS3-203ENST00000575185 ZNF526Q8TF50 670 aaPredicted RBP29.01■■■□□ 2.23
SPNS3-203ENST00000575185 EMILIN1Q9Y6C2 1016 aa29■■■□□ 2.23
SPNS3-203ENST00000575185 KIF24Q5T7B8 1368 aa29■■■□□ 2.23
SPNS3-203ENST00000575185 PIGBQ92521 554 aa28.99■■■□□ 2.23
SPNS3-203ENST00000575185 GPBP1L1Q9HC44 474 aaPredicted RBP28.99■■■□□ 2.23
SPNS3-203ENST00000575185 NCAPD2Q15021 1401 aa28.99■■■□□ 2.23
SPNS3-203ENST00000575185 IGSF1Q8N6C5 1336 aa28.98■■■□□ 2.23
SPNS3-203ENST00000575185 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.97■■■□□ 2.23
SPNS3-203ENST00000575185 IFFO2Q5TF58 517 aa28.97■■■□□ 2.23
SPNS3-203ENST00000575185 SMARCC1Q92922 1105 aaPredicted RBP28.97■■■□□ 2.23
SPNS3-203ENST00000575185 LINC00116Q8NCU8 138 aa28.95■■■□□ 2.22
SPNS3-203ENST00000575185 NSD3Q9BZ95 1437 aa28.94■■■□□ 2.22
SPNS3-203ENST00000575185 CARD14Q9BXL6 1004 aa28.94■■■□□ 2.22
SPNS3-203ENST00000575185 KIAA1551Q9HCM1 1747 aa28.92■■■□□ 2.22
SPNS3-203ENST00000575185 LOC102724428A0A0B4J2F2 783 aa28.91■■■□□ 2.22
SPNS3-203ENST00000575185 PPM1GO15355 546 aaPredicted RBP28.91■■■□□ 2.22
SPNS3-203ENST00000575185 HMGB2P26583 209 aaKnown RBP28.91■■■□□ 2.22
SPNS3-203ENST00000575185 SIK1P57059 783 aa28.91■■■□□ 2.22
SPNS3-203ENST00000575185 NKX1-1Q15270 411 aaPredicted RBP28.91■■■□□ 2.22
SPNS3-203ENST00000575185 SSFA2P28290 1259 aa28.9■■■□□ 2.22
SPNS3-203ENST00000575185 N4BP2Q86UW6 1770 aaPredicted RBP28.9■■■□□ 2.22
SPNS3-203ENST00000575185 CICQ96RK0 1608 aaPredicted RBP28.9■■■□□ 2.22
SPNS3-203ENST00000575185 KIF13BQ9NQT8 1826 aa28.9■■■□□ 2.22
SPNS3-203ENST00000575185 ITPK1Q13572 414 aa28.89■■■□□ 2.22
SPNS3-203ENST00000575185 PCGF6Q9BYE7 350 aa28.88■■■□□ 2.21
SPNS3-203ENST00000575185 ASAP1Q9ULH1 1129 aa28.88■■■□□ 2.21
SPNS3-203ENST00000575185 SPG7Q9UQ90 795 aa28.88■■■□□ 2.21
SPNS3-203ENST00000575185 HSPA6P17066 643 aa28.87■■■□□ 2.21
SPNS3-203ENST00000575185 GNPATO15228 680 aa28.86■■■□□ 2.21
SPNS3-203ENST00000575185 TMOD3Q9NYL9 352 aa28.86■■■□□ 2.21
SPNS3-203ENST00000575185 EYA1Q99502 592 aa28.85■■■□□ 2.21
SPNS3-203ENST00000575185 PXDNLA1KZ92 1463 aa28.84■■■□□ 2.21
SPNS3-203ENST00000575185 CDCA8Q53HL2 280 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms