RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 CDCA7Q9BWT1 371 aaPredicted RBP7.9□□□□□ -1.14
TSR1-203ENST00000575049 GZF1Q9H116 711 aaPredicted RBP7.9□□□□□ -1.14
TSR1-203ENST00000575049 ATP13A2Q9NQ11 1180 aa7.9□□□□□ -1.14
TSR1-203ENST00000575049 SKIP12755 728 aa7.89□□□□□ -1.15
TSR1-203ENST00000575049 ADD1P35611 737 aaKnown RBP7.89□□□□□ -1.15
TSR1-203ENST00000575049 SCTRP47872 440 aa7.89□□□□□ -1.15
TSR1-203ENST00000575049 RBM25P49756 843 aaKnown RBP7.89□□□□□ -1.15
TSR1-203ENST00000575049 MAP7D1Q3KQU3 841 aa7.89□□□□□ -1.15
TSR1-203ENST00000575049 FOXD4L5Q5VV16 416 aaPredicted RBP7.89□□□□□ -1.15
TSR1-203ENST00000575049 TRIM46Q7Z4K8 759 aa7.89□□□□□ -1.15
TSR1-203ENST00000575049 NFATC2IPQ8NCF5 419 aa7.89□□□□□ -1.15
TSR1-203ENST00000575049 FOXD4L4Q8WXT5 416 aaPredicted RBP7.89□□□□□ -1.15
TSR1-203ENST00000575049 ZNF428Q96B54 188 aa7.89□□□□□ -1.15
TSR1-203ENST00000575049 SERPINA10Q9UK55 444 aa7.89□□□□□ -1.15
TSR1-203ENST00000575049 MRPL14Q6P1L8 145 aaKnown RBP7.88□□□□□ -1.15
TSR1-203ENST00000575049 ADH1AP07327 375 aa7.87□□□□□ -1.15
TSR1-203ENST00000575049 OXLD1Q5BKU9 147 aa7.87□□□□□ -1.15
TSR1-203ENST00000575049 TBC1D9Q6ZT07 1266 aa7.87□□□□□ -1.15
TSR1-203ENST00000575049 LINC00528Q8N1L1 170 aa7.87□□□□□ -1.15
TSR1-203ENST00000575049 USP17L5A8MUK1 530 aa7.86□□□□□ -1.15
TSR1-203ENST00000575049 UPP2O95045 317 aa7.86□□□□□ -1.15
TSR1-203ENST00000575049 MYCP01106 439 aaPredicted RBP7.86□□□□□ -1.15
TSR1-203ENST00000575049 AGBL1Q96MI9 1066 aa7.86□□□□□ -1.15
TSR1-203ENST00000575049 TSEN34Q9BSV6 310 aaKnown RBP7.86□□□□□ -1.15
TSR1-203ENST00000575049 OSBPL3Q9H4L5 887 aa7.86□□□□□ -1.15
TSR1-203ENST00000575049 ESF1Q9H501 851 aaKnown RBP7.86□□□□□ -1.15
TSR1-203ENST00000575049 ATP9BO43861 1147 aa7.85□□□□□ -1.15
TSR1-203ENST00000575049 RELBQ01201 579 aa7.85□□□□□ -1.15
TSR1-203ENST00000575049 USP4Q13107 963 aa7.85□□□□□ -1.15
TSR1-203ENST00000575049 SCARF1Q14162 830 aa7.85□□□□□ -1.15
TSR1-203ENST00000575049 C6orf118Q5T5N4 469 aa7.85□□□□□ -1.15
TSR1-203ENST00000575049 KDF1Q8NAX2 398 aaPredicted RBP7.85□□□□□ -1.15
TSR1-203ENST00000575049 SIRT1Q96EB6 747 aa7.85□□□□□ -1.15
TSR1-203ENST00000575049 CCDC97Q96F63 343 aaPredicted RBP7.85□□□□□ -1.15
TSR1-203ENST00000575049 PURBQ96QR8 312 aaKnown RBP7.85□□□□□ -1.15
TSR1-203ENST00000575049 GMPR2Q9P2T1 348 aaKnown RBP7.85□□□□□ -1.15
TSR1-203ENST00000575049 LZTS3O60299 673 aaPredicted RBP7.84□□□□□ -1.15
TSR1-203ENST00000575049 BMP2P12643 396 aa7.84□□□□□ -1.15
TSR1-203ENST00000575049 NCOA4Q13772 614 aa7.84□□□□□ -1.15
TSR1-203ENST00000575049 CYP2U1Q7Z449 544 aa7.84□□□□□ -1.15
TSR1-203ENST00000575049 DEPDC4Q8N2C3 294 aa7.84□□□□□ -1.15
TSR1-203ENST00000575049 RETREG2Q8NC44 543 aa7.84□□□□□ -1.15
TSR1-203ENST00000575049 ZFP42Q96MM3 310 aa7.84□□□□□ -1.15
TSR1-203ENST00000575049 PPP1R12CQ9BZL4 782 aa7.84□□□□□ -1.15
TSR1-203ENST00000575049 TFIP11Q9UBB9 837 aaKnown RBP7.84□□□□□ -1.15
TSR1-203ENST00000575049 USP17L3A6NCW0 530 aa7.83□□□□□ -1.16
TSR1-203ENST00000575049 USP17L4A6NCW7 530 aa7.83□□□□□ -1.16
TSR1-203ENST00000575049 PALM3A6NDB9 673 aaPredicted RBP7.83□□□□□ -1.16
TSR1-203ENST00000575049 ATP5J2-PTCD1G3V325 749 aa7.83□□□□□ -1.16
TSR1-203ENST00000575049 PTGIRP43119 386 aa7.83□□□□□ -1.16
TSR1-203ENST00000575049 EML3Q32P44 896 aa7.83□□□□□ -1.16
TSR1-203ENST00000575049 USP17L2Q6R6M4 530 aa7.83□□□□□ -1.16
TSR1-203ENST00000575049 USP17L1Q7RTZ2 530 aa7.83□□□□□ -1.16
TSR1-203ENST00000575049 PLEKHM2Q8IWE5 1019 aa7.83□□□□□ -1.16
TSR1-203ENST00000575049 SENP2Q9HC62 589 aa7.83□□□□□ -1.16
TSR1-203ENST00000575049 SPINT1O43278 529 aa7.82□□□□□ -1.16
TSR1-203ENST00000575049 ZNF395Q9H8N7 513 aaPredicted RBP7.82□□□□□ -1.16
TSR1-203ENST00000575049 MAFBQ9Y5Q3 323 aaPredicted RBP7.82□□□□□ -1.16
TSR1-203ENST00000575049 POTECB2RU33 542 aa7.81□□□□□ -1.16
TSR1-203ENST00000575049 E9PSI1 815 aa7.81□□□□□ -1.16
TSR1-203ENST00000575049 KIFC2Q96AC6 838 aa7.81□□□□□ -1.16
TSR1-203ENST00000575049 TRIM47Q96LD4 638 aa7.81□□□□□ -1.16
TSR1-203ENST00000575049 NOD1Q9Y239 953 aa7.81□□□□□ -1.16
TSR1-203ENST00000575049 TTBK1Q5TCY1 1321 aaPredicted RBP7.8□□□□□ -1.16
TSR1-203ENST00000575049 GNRH1P01148 92 aa7.8□□□□□ -1.16
TSR1-203ENST00000575049 HMGB1P09429 215 aaKnown RBP7.8□□□□□ -1.16
TSR1-203ENST00000575049 INSM2Q96T92 566 aaPredicted RBP7.8□□□□□ -1.16
TSR1-203ENST00000575049 ARHGEF10LQ9HCE6 1279 aa7.8□□□□□ -1.16
TSR1-203ENST00000575049 C11orf95C9JLR9 678 aaPredicted RBP7.79□□□□□ -1.16
TSR1-203ENST00000575049 LMOD1P29536 600 aaPredicted RBP7.79□□□□□ -1.16
TSR1-203ENST00000575049 CFAP70Q5T0N1 1121 aa7.79□□□□□ -1.16
TSR1-203ENST00000575049 A0A1W2PRU2 124 aa7.78□□□□□ -1.16
TSR1-203ENST00000575049 SNRPBP14678 240 aaKnown RBP7.78□□□□□ -1.16
TSR1-203ENST00000575049 GTF2IP78347 998 aa7.78□□□□□ -1.16
TSR1-203ENST00000575049 ZNF787Q6DD87 383 aa7.78□□□□□ -1.16
TSR1-203ENST00000575049 POLMQ9NP87 494 aaPredicted RBP7.78□□□□□ -1.16
TSR1-203ENST00000575049 RAB6BQ9NRW1 208 aa7.78□□□□□ -1.16
TSR1-203ENST00000575049 MKRN1Q9UHC7 482 aaKnown RBP7.78□□□□□ -1.16
TSR1-203ENST00000575049 PCDHGA11Q9Y5H2 935 aa7.78□□□□□ -1.16
TSR1-203ENST00000575049 SOS2Q07890 1332 aaPredicted RBP7.78□□□□□ -1.16
TSR1-203ENST00000575049 TTLL8A6PVC2 850 aa7.77□□□□□ -1.17
TSR1-203ENST00000575049 MEN1O00255 615 aa7.77□□□□□ -1.17
TSR1-203ENST00000575049 HSP90B1P14625 803 aaKnown RBP7.77□□□□□ -1.17
TSR1-203ENST00000575049 CTSOP43234 321 aaPredicted RBP7.77□□□□□ -1.17
TSR1-203ENST00000575049 CLN3Q13286 438 aa7.77□□□□□ -1.17
TSR1-203ENST00000575049 TRIM50Q86XT4 487 aa7.77□□□□□ -1.17
TSR1-203ENST00000575049 STAU1O95793 577 aaKnown RBP7.76□□□□□ -1.17
TSR1-203ENST00000575049 IL2RAP01589 272 aa7.76□□□□□ -1.17
TSR1-203ENST00000575049 ETNK1Q9HBU6 452 aa7.76□□□□□ -1.17
TSR1-203ENST00000575049 SOBPA7XYQ1 873 aa7.75□□□□□ -1.17
TSR1-203ENST00000575049 ATP1A2P50993 1020 aa7.75□□□□□ -1.17
TSR1-203ENST00000575049 SCNN1DP51172 638 aa7.75□□□□□ -1.17
TSR1-203ENST00000575049 CLDN10P78369 228 aa7.75□□□□□ -1.17
TSR1-203ENST00000575049 PSME1Q06323 249 aa7.75□□□□□ -1.17
TSR1-203ENST00000575049 ESCO1Q5FWF5 840 aa7.75□□□□□ -1.17
TSR1-203ENST00000575049 CNKSR1Q969H4 720 aa7.75□□□□□ -1.17
TSR1-203ENST00000575049 NLRP3Q96P20 1036 aa7.75□□□□□ -1.17
TSR1-203ENST00000575049 PUS7Q96PZ0 661 aaKnown RBP7.75□□□□□ -1.17
TSR1-203ENST00000575049 ESYT1Q9BSJ8 1104 aa7.75□□□□□ -1.17
TSR1-203ENST00000575049 DNMT3LQ9UJW3 386 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms