RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 TERF2IPQ9NYB0 399 aa16.95■□□□□ 0.3
CTNS-208ENST00000574218 PRIM1P49642 420 aaKnown RBP16.94■□□□□ 0.3
CTNS-208ENST00000574218 IP6K1Q92551 441 aa16.94■□□□□ 0.3
CTNS-208ENST00000574218 CD163L1Q9NR16 1453 aa16.93■□□□□ 0.3
CTNS-208ENST00000574218 NEUROD1Q13562 356 aa16.93■□□□□ 0.3
CTNS-208ENST00000574218 CCNL1Q9UK58 526 aaPredicted RBP16.93■□□□□ 0.3
CTNS-208ENST00000574218 C5P01031 1676 aa16.92■□□□□ 0.3
CTNS-208ENST00000574218 HMGB2P26583 209 aaKnown RBP16.92■□□□□ 0.3
CTNS-208ENST00000574218 KCNQ4P56696 695 aa16.92■□□□□ 0.3
CTNS-208ENST00000574218 GOLGB1Q14789 3259 aaKnown RBP16.92■□□□□ 0.3
CTNS-208ENST00000574218 USP47Q96K76 1375 aa16.91■□□□□ 0.3
CTNS-208ENST00000574218 AMPHP49418 695 aa16.9■□□□□ 0.3
CTNS-208ENST00000574218 ZCRB1Q8TBF4 217 aaKnown RBP16.9■□□□□ 0.3
CTNS-208ENST00000574218 SIN3AQ96ST3 1273 aa16.9■□□□□ 0.3
CTNS-208ENST00000574218 CARD11Q9BXL7 1154 aa16.9■□□□□ 0.3
CTNS-208ENST00000574218 SLC12A5Q9H2X9 1139 aa16.9■□□□□ 0.3
CTNS-208ENST00000574218 A0A1W2PP64 1363 aa16.89■□□□□ 0.3
CTNS-208ENST00000574218 ATP10DQ9P241 1426 aa16.89■□□□□ 0.29
CTNS-208ENST00000574218 YBX3P16989 372 aaKnown RBP eCLIP16.89■□□□□ 0.29
CTNS-208ENST00000574218 GPBP1L1Q9HC44 474 aaPredicted RBP16.89■□□□□ 0.29
CTNS-208ENST00000574218 TAF1LQ8IZX4 1826 aa16.89■□□□□ 0.29
CTNS-208ENST00000574218 MSL1Q68DK7 614 aa16.88■□□□□ 0.29
CTNS-208ENST00000574218 COG3Q96JB2 828 aa16.88■□□□□ 0.29
CTNS-208ENST00000574218 COL23A1Q86Y22 540 aaPredicted RBP16.87■□□□□ 0.29
CTNS-208ENST00000574218 FLAD1Q8NFF5 587 aa16.87■□□□□ 0.29
CTNS-208ENST00000574218 NSD2O96028 1365 aa16.87■□□□□ 0.29
CTNS-208ENST00000574218 SMG6Q86US8 1419 aaKnown RBP16.86■□□□□ 0.29
CTNS-208ENST00000574218 CEP350Q5VT06 3117 aa16.85■□□□□ 0.29
CTNS-208ENST00000574218 HOXC9P31274 260 aa16.85■□□□□ 0.29
CTNS-208ENST00000574218 CD2APQ9Y5K6 639 aa16.85■□□□□ 0.29
CTNS-208ENST00000574218 MEGF6O75095 1541 aa16.85■□□□□ 0.29
CTNS-208ENST00000574218 RAPGEF4Q8WZA2 1011 aa16.84■□□□□ 0.29
CTNS-208ENST00000574218 CGNL1Q0VF96 1302 aa16.84■□□□□ 0.29
CTNS-208ENST00000574218 MAP3K19Q56UN5 1328 aa16.84■□□□□ 0.29
CTNS-208ENST00000574218 ITGB4P16144 1822 aa16.83■□□□□ 0.28
CTNS-208ENST00000574218 ZNF526Q8TF50 670 aaPredicted RBP16.83■□□□□ 0.28
CTNS-208ENST00000574218 RTL1A6NKG5 1358 aa16.82■□□□□ 0.28
CTNS-208ENST00000574218 TATP17735 454 aaPredicted RBP16.82■□□□□ 0.28
CTNS-208ENST00000574218 PUS7Q96PZ0 661 aaKnown RBP16.82■□□□□ 0.28
CTNS-208ENST00000574218 HSPA6P17066 643 aa16.81■□□□□ 0.28
CTNS-208ENST00000574218 C4BP0C0L5 1744 aa16.81■□□□□ 0.28
CTNS-208ENST00000574218 AK7Q96M32 723 aa16.8■□□□□ 0.28
CTNS-208ENST00000574218 UBR3Q6ZT12 1888 aa16.8■□□□□ 0.28
CTNS-208ENST00000574218 NSD3Q9BZ95 1437 aa16.79■□□□□ 0.28
CTNS-208ENST00000574218 PALLDQ8WX93 1383 aa16.79■□□□□ 0.28
CTNS-208ENST00000574218 PCDH11XQ9BZA7 1347 aa16.79■□□□□ 0.28
CTNS-208ENST00000574218 PCDH11YQ9BZA8 1340 aa16.79■□□□□ 0.28
CTNS-208ENST00000574218 KIF20BQ96Q89 1820 aa16.79■□□□□ 0.28
CTNS-208ENST00000574218 SLC24A1O60721 1099 aa16.78■□□□□ 0.28
CTNS-208ENST00000574218 USHBP1Q8N6Y0 703 aa16.78■□□□□ 0.28
CTNS-208ENST00000574218 IGSF1Q8N6C5 1336 aa16.77■□□□□ 0.28
CTNS-208ENST00000574218 NBPF6Q5VWK0 638 aa16.77■□□□□ 0.28
CTNS-208ENST00000574218 MPRIPQ6WCQ1 1025 aa16.77■□□□□ 0.28
CTNS-208ENST00000574218 SMARCC1Q92922 1105 aaPredicted RBP16.77■□□□□ 0.28
CTNS-208ENST00000574218 NBPF4Q96M43 638 aa16.77■□□□□ 0.28
CTNS-208ENST00000574218 ADCY9O60503 1353 aa16.77■□□□□ 0.27
CTNS-208ENST00000574218 FBLN1P23142 703 aa16.76■□□□□ 0.27
CTNS-208ENST00000574218 RRS1Q15050 365 aaKnown RBP16.76■□□□□ 0.27
CTNS-208ENST00000574218 TOGARAM1Q9Y4F4 1720 aa16.76■□□□□ 0.27
CTNS-208ENST00000574218 TONSLQ96HA7 1378 aa16.76■□□□□ 0.27
CTNS-208ENST00000574218 PHF14O94880 888 aa16.75■□□□□ 0.27
CTNS-208ENST00000574218 WWC3Q9ULE0 1092 aa16.74■□□□□ 0.27
CTNS-208ENST00000574218 PKD1L3Q7Z443 1732 aa16.73■□□□□ 0.27
CTNS-208ENST00000574218 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.71■□□□□ 0.27
CTNS-208ENST00000574218 GGNBP2Q9H3C7 697 aa16.71■□□□□ 0.27
CTNS-208ENST00000574218 INSRP06213 1382 aa16.71■□□□□ 0.27
CTNS-208ENST00000574218 FLT4P35916 1363 aa16.71■□□□□ 0.27
CTNS-208ENST00000574218 SSFA2P28290 1259 aa16.7■□□□□ 0.26
CTNS-208ENST00000574218 POTEDQ86YR6 584 aa16.7■□□□□ 0.26
CTNS-208ENST00000574218 N4BP2Q86UW6 1770 aaPredicted RBP16.69■□□□□ 0.26
CTNS-208ENST00000574218 KIF24Q5T7B8 1368 aa16.69■□□□□ 0.26
CTNS-208ENST00000574218 MAP2P11137 1827 aaKnown RBP16.69■□□□□ 0.26
CTNS-208ENST00000574218 ST20-MTHFSA0A0A6YYL1 179 aa16.69■□□□□ 0.26
CTNS-208ENST00000574218 APLP1P51693 650 aa16.69■□□□□ 0.26
CTNS-208ENST00000574218 CICQ96RK0 1608 aaPredicted RBP16.69■□□□□ 0.26
CTNS-208ENST00000574218 KIF13BQ9NQT8 1826 aa16.68■□□□□ 0.26
CTNS-208ENST00000574218 HSP90AB2PQ58FF8 381 aa16.68■□□□□ 0.26
CTNS-208ENST00000574218 KIF3CO14782 793 aa16.67■□□□□ 0.26
CTNS-208ENST00000574218 FYB1O15117 783 aa16.67■□□□□ 0.26
CTNS-208ENST00000574218 CYP27B1O15528 508 aa16.67■□□□□ 0.26
CTNS-208ENST00000574218 TESK2Q96S53 571 aa16.67■□□□□ 0.26
CTNS-208ENST00000574218 SPG7Q9UQ90 795 aa16.67■□□□□ 0.26
CTNS-208ENST00000574218 LOC102724428A0A0B4J2F2 783 aa16.66■□□□□ 0.26
CTNS-208ENST00000574218 GNPATO15228 680 aa16.66■□□□□ 0.26
CTNS-208ENST00000574218 SIK1P57059 783 aa16.66■□□□□ 0.26
CTNS-208ENST00000574218 TMF1P82094 1093 aa16.66■□□□□ 0.26
CTNS-208ENST00000574218 PIGBQ92521 554 aa16.66■□□□□ 0.26
CTNS-208ENST00000574218 TMOD3Q9NYL9 352 aa16.66■□□□□ 0.26
CTNS-208ENST00000574218 TOMM70O94826 608 aa16.64■□□□□ 0.25
CTNS-208ENST00000574218 SMIM5Q71RC9 77 aa16.64■□□□□ 0.25
CTNS-208ENST00000574218 AMIGO3Q86WK7 504 aa16.64■□□□□ 0.25
CTNS-208ENST00000574218 LINC00116Q8NCU8 138 aa16.64■□□□□ 0.25
CTNS-208ENST00000574218 WDR90Q96KV7 1748 aa16.64■□□□□ 0.25
CTNS-208ENST00000574218 MMP10P09238 476 aa16.63■□□□□ 0.25
CTNS-208ENST00000574218 ATP6V1AP38606 617 aa16.63■□□□□ 0.25
CTNS-208ENST00000574218 BCS1LQ9Y276 419 aa16.63■□□□□ 0.25
CTNS-208ENST00000574218 KIAA1551Q9HCM1 1747 aa16.62■□□□□ 0.25
CTNS-208ENST00000574218 PPM1GO15355 546 aaPredicted RBP16.62■□□□□ 0.25
CTNS-208ENST00000574218 CDCA8Q53HL2 280 aa16.62■□□□□ 0.25
CTNS-208ENST00000574218 C16orf71Q8IYS4 520 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms