RNA–Protein interactions for RNA: ENST00000574202.1

ATP2A3-213, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 230 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-213ENST00000574202 CRB1P82279 1406 aa15.32■□□□□ 0.04
ATP2A3-213ENST00000574202 TATP17735 454 aaPredicted RBP15.31■□□□□ 0.04
ATP2A3-213ENST00000574202 MTHFSDQ2M296 383 aaKnown RBP15.31■□□□□ 0.04
ATP2A3-213ENST00000574202 CARD10Q9BWT7 1032 aa15.31■□□□□ 0.04
ATP2A3-213ENST00000574202 ZNF521Q96K83 1311 aa15.31■□□□□ 0.04
ATP2A3-213ENST00000574202 DISP2A7MBM2 1401 aa15.3■□□□□ 0.04
ATP2A3-213ENST00000574202 GOLGA2Q08379 1002 aa15.3■□□□□ 0.04
ATP2A3-213ENST00000574202 PLEKHO1Q53GL0 409 aaPredicted RBP15.3■□□□□ 0.04
ATP2A3-213ENST00000574202 PHF23Q9BUL5 403 aaPredicted RBP15.3■□□□□ 0.04
ATP2A3-213ENST00000574202 USP21Q9UK80 565 aa15.3■□□□□ 0.04
ATP2A3-213ENST00000574202 TRIM35Q9UPQ4 493 aa15.3■□□□□ 0.04
ATP2A3-213ENST00000574202 DLG5Q8TDM6 1919 aa15.29■□□□□ 0.04
ATP2A3-213ENST00000574202 THSD7AQ9UPZ6 1657 aa15.29■□□□□ 0.04
ATP2A3-213ENST00000574202 SPATA31A5Q5VU36 1347 aa15.29■□□□□ 0.04
ATP2A3-213ENST00000574202 SPATA31A7Q8IWB4 1347 aa15.29■□□□□ 0.04
ATP2A3-213ENST00000574202 VPS72Q15906 364 aa15.29■□□□□ 0.04
ATP2A3-213ENST00000574202 AMOTQ4VCS5 1084 aa15.29■□□□□ 0.04
ATP2A3-213ENST00000574202 WDR63Q8IWG1 891 aa15.29■□□□□ 0.04
ATP2A3-213ENST00000574202 SPATA31A1Q5TZJ5 1347 aa15.28■□□□□ 0.04
ATP2A3-213ENST00000574202 CDCA7LQ96GN5 454 aa15.28■□□□□ 0.04
ATP2A3-213ENST00000574202 USP35Q9P2H5 1018 aa15.28■□□□□ 0.04
ATP2A3-213ENST00000574202 PARP4Q9UKK3 1724 aaKnown RBP15.28■□□□□ 0.04
ATP2A3-213ENST00000574202 MEGF6O75095 1541 aa15.27■□□□□ 0.04
ATP2A3-213ENST00000574202 PLEKHG2Q9H7P9 1386 aa15.27■□□□□ 0.04
ATP2A3-213ENST00000574202 CALD1Q05682 793 aaKnown RBP15.27■□□□□ 0.04
ATP2A3-213ENST00000574202 RTF1Q92541 710 aaKnown RBP15.27■□□□□ 0.04
ATP2A3-213ENST00000574202 SPG7Q9UQ90 795 aa15.27■□□□□ 0.04
ATP2A3-213ENST00000574202 MAP3K5Q99683 1374 aa15.26■□□□□ 0.03
ATP2A3-213ENST00000574202 IL2RBP14784 551 aa15.26■□□□□ 0.03
ATP2A3-213ENST00000574202 ZNF530Q6P9A1 599 aaPredicted RBP15.26■□□□□ 0.03
ATP2A3-213ENST00000574202 SHANK3Q9BYB0 1731 aa15.26■□□□□ 0.03
ATP2A3-213ENST00000574202 LRRC37A3O60309 1634 aa15.25■□□□□ 0.03
ATP2A3-213ENST00000574202 GNAT3A8MTJ3 354 aa15.25■□□□□ 0.03
ATP2A3-213ENST00000574202 E9PSI1 815 aa15.25■□□□□ 0.03
ATP2A3-213ENST00000574202 HTATSF1O43719 755 aaKnown RBP15.25■□□□□ 0.03
ATP2A3-213ENST00000574202 SLFN5Q08AF3 891 aa15.25■□□□□ 0.03
ATP2A3-213ENST00000574202 C1orf141Q5JVX7 400 aa15.25■□□□□ 0.03
ATP2A3-213ENST00000574202 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.25■□□□□ 0.03
ATP2A3-213ENST00000574202 CCDC9Q9Y3X0 531 aaKnown RBP15.25■□□□□ 0.03
ATP2A3-213ENST00000574202 OVOS2A0A0G2JMS6 1433 aa15.25■□□□□ 0.03
ATP2A3-213ENST00000574202 IL16Q14005 1332 aa15.24■□□□□ 0.03
ATP2A3-213ENST00000574202 PKD1L3Q7Z443 1732 aa15.24■□□□□ 0.03
ATP2A3-213ENST00000574202 AKAP4Q5JQC9 854 aa15.24■□□□□ 0.03
ATP2A3-213ENST00000574202 POTEAQ6S8J7 498 aa15.24■□□□□ 0.03
ATP2A3-213ENST00000574202 THUMPD2Q9BTF0 503 aaKnown RBP15.24■□□□□ 0.03
ATP2A3-213ENST00000574202 TRPC5Q9UL62 973 aaPredicted RBP15.24■□□□□ 0.03
ATP2A3-213ENST00000574202 DCTN1Q14203 1278 aa15.23■□□□□ 0.03
ATP2A3-213ENST00000574202 ZNF772Q68DY9 489 aaPredicted RBP15.23■□□□□ 0.03
ATP2A3-213ENST00000574202 MCM10Q7L590 875 aa15.23■□□□□ 0.03
ATP2A3-213ENST00000574202 MYH16Q9H6N6 1097 aa15.23■□□□□ 0.03
ATP2A3-213ENST00000574202 GJD4Q96KN9 370 aaPredicted RBP15.22■□□□□ 0.03
ATP2A3-213ENST00000574202 QTRT2Q9H974 415 aaKnown RBP15.22■□□□□ 0.03
ATP2A3-213ENST00000574202 SPINK5Q9NQ38 1064 aaPredicted RBP15.22■□□□□ 0.03
ATP2A3-213ENST00000574202 THRAP3Q9Y2W1 955 aaKnown RBP15.22■□□□□ 0.03
ATP2A3-213ENST00000574202 BARGINQ6ZT62 677 aa15.21■□□□□ 0.03
ATP2A3-213ENST00000574202 ZCRB1Q8TBF4 217 aaKnown RBP15.21■□□□□ 0.03
ATP2A3-213ENST00000574202 LAS1LQ9Y4W2 734 aaKnown RBP15.21■□□□□ 0.03
ATP2A3-213ENST00000574202 ONECUT3O60422 494 aaPredicted RBP15.2■□□□□ 0.02
ATP2A3-213ENST00000574202 GNAI1P63096 354 aa15.2■□□□□ 0.02
ATP2A3-213ENST00000574202 DUSP27Q5VZP5 1158 aa15.2■□□□□ 0.02
ATP2A3-213ENST00000574202 TRMT2AQ8IZ69 625 aaKnown RBP15.2■□□□□ 0.02
ATP2A3-213ENST00000574202 IFNL2Q8IZJ0 200 aa15.2■□□□□ 0.02
ATP2A3-213ENST00000574202 CDCA7Q9BWT1 371 aaPredicted RBP15.2■□□□□ 0.02
ATP2A3-213ENST00000574202 PCDH11XQ9BZA7 1347 aa15.19■□□□□ 0.02
ATP2A3-213ENST00000574202 PCDH11YQ9BZA8 1340 aa15.19■□□□□ 0.02
ATP2A3-213ENST00000574202 RGS12O14924 1447 aa15.19■□□□□ 0.02
ATP2A3-213ENST00000574202 PHKG2P15735 406 aa15.19■□□□□ 0.02
ATP2A3-213ENST00000574202 IFT57Q9NWB7 429 aa15.19■□□□□ 0.02
ATP2A3-213ENST00000574202 TNS2Q63HR2 1409 aa15.18■□□□□ 0.02
ATP2A3-213ENST00000574202 HSP90AB1P08238 724 aaKnown RBP15.18■□□□□ 0.02
ATP2A3-213ENST00000574202 MPRIPQ6WCQ1 1025 aa15.18■□□□□ 0.02
ATP2A3-213ENST00000574202 IL17REQ8NFR9 667 aa15.18■□□□□ 0.02
ATP2A3-213ENST00000574202 TSR2Q969E8 191 aaKnown RBP15.18■□□□□ 0.02
ATP2A3-213ENST00000574202 FANCIQ9NVI1 1328 aa15.17■□□□□ 0.02
ATP2A3-213ENST00000574202 BRWD3Q6RI45 1802 aa15.17■□□□□ 0.02
ATP2A3-213ENST00000574202 CYP27B1O15528 508 aa15.17■□□□□ 0.02
ATP2A3-213ENST00000574202 RBM6P78332 1123 aaKnown RBP15.17■□□□□ 0.02
ATP2A3-213ENST00000574202 FAM98CQ17RN3 349 aaKnown RBP15.17■□□□□ 0.02
ATP2A3-213ENST00000574202 DDX54Q8TDD1 881 aaKnown RBP15.17■□□□□ 0.02
ATP2A3-213ENST00000574202 CFAP44Q96MT7 982 aa15.17■□□□□ 0.02
ATP2A3-213ENST00000574202 LGR6Q9HBX8 967 aa15.17■□□□□ 0.02
ATP2A3-213ENST00000574202 EXOC5O00471 708 aa15.16■□□□□ 0.02
ATP2A3-213ENST00000574202 RNMTO43148 476 aaKnown RBP15.16■□□□□ 0.02
ATP2A3-213ENST00000574202 ZNF853P0CG23 659 aa15.16■□□□□ 0.02
ATP2A3-213ENST00000574202 VIRMAQ69YN4 1812 aaKnown RBP15.15■□□□□ 0.02
ATP2A3-213ENST00000574202 CEMIPQ8WUJ3 1361 aa15.15■□□□□ 0.02
ATP2A3-213ENST00000574202 TEFQ10587 303 aa15.15■□□□□ 0.02
ATP2A3-213ENST00000574202 DCAF5Q96JK2 942 aa15.15■□□□□ 0.02
ATP2A3-213ENST00000574202 ADAMTS7Q9UKP4 1686 aa15.15■□□□□ 0.02
ATP2A3-213ENST00000574202 EP400Q96L91 3159 aa15.14■□□□□ 0.01
ATP2A3-213ENST00000574202 SCN11AQ9UI33 1791 aa15.14■□□□□ 0.01
ATP2A3-213ENST00000574202 CHL1O00533 1208 aa15.14■□□□□ 0.01
ATP2A3-213ENST00000574202 TAF7Q15545 349 aaPredicted RBP15.14■□□□□ 0.01
ATP2A3-213ENST00000574202 DDB1Q16531 1140 aa15.14■□□□□ 0.01
ATP2A3-213ENST00000574202 MBIPQ9NS73 344 aa15.14■□□□□ 0.01
ATP2A3-213ENST00000574202 KDM6AO15550 1401 aaPredicted RBP15.13■□□□□ 0.01
ATP2A3-213ENST00000574202 EXOSC9Q06265 439 aaKnown RBP15.13■□□□□ 0.01
ATP2A3-213ENST00000574202 TSPYL4Q9UJ04 414 aa15.13■□□□□ 0.01
ATP2A3-213ENST00000574202 RCAN3Q9UKA8 241 aa15.13■□□□□ 0.01
ATP2A3-213ENST00000574202 TOGARAM1Q9Y4F4 1720 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms