RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 FAM182BQ5T319 152 aa17.13■□□□□ 0.33
TRAPPC1-206ENST00000573989 MARCH10Q8NA82 808 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC1-206ENST00000573989 DDX54Q8TDD1 881 aaKnown RBP17.12■□□□□ 0.33
TRAPPC1-206ENST00000573989 SPG7Q9UQ90 795 aa17.12■□□□□ 0.33
TRAPPC1-206ENST00000573989 MYBBP1AQ9BQG0 1328 aaKnown RBP17.12■□□□□ 0.33
TRAPPC1-206ENST00000573989 PCDH11XQ9BZA7 1347 aa17.12■□□□□ 0.33
TRAPPC1-206ENST00000573989 PCDH11YQ9BZA8 1340 aa17.12■□□□□ 0.33
TRAPPC1-206ENST00000573989 EP400Q96L91 3159 aa17.12■□□□□ 0.33
TRAPPC1-206ENST00000573989 PKD1L3Q7Z443 1732 aa17.11■□□□□ 0.33
TRAPPC1-206ENST00000573989 U2SURPO15042 1029 aaKnown RBP17.11■□□□□ 0.33
TRAPPC1-206ENST00000573989 SULT6B1Q6IMI4 303 aa17.11■□□□□ 0.33
TRAPPC1-206ENST00000573989 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.11■□□□□ 0.33
TRAPPC1-206ENST00000573989 BCL9O00512 1426 aa17.11■□□□□ 0.33
TRAPPC1-206ENST00000573989 COL3A1P02461 1466 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC1-206ENST00000573989 SBF2Q86WG5 1849 aa17.1■□□□□ 0.33
TRAPPC1-206ENST00000573989 PRKRIP1Q9H875 184 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC1-206ENST00000573989 AMOTQ4VCS5 1084 aa17.09■□□□□ 0.33
TRAPPC1-206ENST00000573989 PLEKHO1Q53GL0 409 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC1-206ENST00000573989 KDRP35968 1356 aa17.09■□□□□ 0.33
TRAPPC1-206ENST00000573989 SHANK3Q9BYB0 1731 aa17.09■□□□□ 0.33
TRAPPC1-206ENST00000573989 ANP32CO43423 234 aa17.07■□□□□ 0.32
TRAPPC1-206ENST00000573989 TRIM37O94972 964 aa17.07■□□□□ 0.32
TRAPPC1-206ENST00000573989 AEBP1Q8IUX7 1158 aa17.07■□□□□ 0.32
TRAPPC1-206ENST00000573989 HMOX1P09601 288 aa17.06■□□□□ 0.32
TRAPPC1-206ENST00000573989 BAG6P46379 1132 aa17.06■□□□□ 0.32
TRAPPC1-206ENST00000573989 IFNL2Q8IZJ0 200 aa17.05■□□□□ 0.32
TRAPPC1-206ENST00000573989 BCL11BQ9C0K0 894 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC1-206ENST00000573989 TNS1Q9HBL0 1735 aaKnown RBP17.04■□□□□ 0.32
TRAPPC1-206ENST00000573989 U2AF1L5P0DN76 240 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC1-206ENST00000573989 U2AF1Q01081 240 aaKnown RBP eCLIP17.04■□□□□ 0.32
TRAPPC1-206ENST00000573989 NHSQ6T4R5 1651 aa17.04■□□□□ 0.32
TRAPPC1-206ENST00000573989 NEFMP07197 916 aa17.03■□□□□ 0.32
TRAPPC1-206ENST00000573989 HSP90AB1P08238 724 aaKnown RBP17.03■□□□□ 0.32
TRAPPC1-206ENST00000573989 C1orf141Q5JVX7 400 aa17.03■□□□□ 0.32
TRAPPC1-206ENST00000573989 DOT1LQ8TEK3 1739 aa17.02■□□□□ 0.32
TRAPPC1-206ENST00000573989 CYP27B1O15528 508 aa17.02■□□□□ 0.32
TRAPPC1-206ENST00000573989 FCHSD2O94868 740 aa17.02■□□□□ 0.32
TRAPPC1-206ENST00000573989 APBA3O96018 575 aa17.02■□□□□ 0.32
TRAPPC1-206ENST00000573989 ZNF530Q6P9A1 599 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC1-206ENST00000573989 ACSBG1Q96GR2 724 aa17.02■□□□□ 0.32
TRAPPC1-206ENST00000573989 PNNQ9H307 717 aaKnown RBP17.02■□□□□ 0.32
TRAPPC1-206ENST00000573989 PHKG2P15735 406 aa17.01■□□□□ 0.31
TRAPPC1-206ENST00000573989 SYTL4Q96C24 671 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC1-206ENST00000573989 NKX1-1Q15270 411 aaPredicted RBP17■□□□□ 0.31
TRAPPC1-206ENST00000573989 BTAF1O14981 1849 aa16.98■□□□□ 0.31
TRAPPC1-206ENST00000573989 RGPD3A6NKT7 1758 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC1-206ENST00000573989 RGPD4Q7Z3J3 1758 aa16.98■□□□□ 0.31
TRAPPC1-206ENST00000573989 KCNQ2O43526 872 aa16.98■□□□□ 0.31
TRAPPC1-206ENST00000573989 PRKAR2BP31323 418 aa16.98■□□□□ 0.31
TRAPPC1-206ENST00000573989 WDR43Q15061 677 aaKnown RBP eCLIP16.98■□□□□ 0.31
TRAPPC1-206ENST00000573989 DEFB132Q7Z7B7 95 aa16.98■□□□□ 0.31
TRAPPC1-206ENST00000573989 GAS2L2Q8NHY3 880 aa16.98■□□□□ 0.31
TRAPPC1-206ENST00000573989 DCAF5Q96JK2 942 aa16.98■□□□□ 0.31
TRAPPC1-206ENST00000573989 RSPH6AQ9H0K4 717 aa16.98■□□□□ 0.31
TRAPPC1-206ENST00000573989 ITGB4P16144 1822 aa16.98■□□□□ 0.31
TRAPPC1-206ENST00000573989 PLSCR1O15162 318 aa16.97■□□□□ 0.31
TRAPPC1-206ENST00000573989 PRIM1P49642 420 aaKnown RBP16.97■□□□□ 0.31
TRAPPC1-206ENST00000573989 EN1Q05925 392 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC1-206ENST00000573989 AKAP4Q5JQC9 854 aa16.97■□□□□ 0.31
TRAPPC1-206ENST00000573989 VIRMAQ69YN4 1812 aaKnown RBP16.96■□□□□ 0.3
TRAPPC1-206ENST00000573989 ERVV-2B6SEH9 535 aa16.95■□□□□ 0.3
TRAPPC1-206ENST00000573989 MTHFSDQ2M296 383 aaKnown RBP16.95■□□□□ 0.3
TRAPPC1-206ENST00000573989 TOGARAM1Q9Y4F4 1720 aa16.95■□□□□ 0.3
TRAPPC1-206ENST00000573989 MPRIPQ6WCQ1 1025 aa16.94■□□□□ 0.3
TRAPPC1-206ENST00000573989 TMOD3Q9NYL9 352 aa16.94■□□□□ 0.3
TRAPPC1-206ENST00000573989 SCN11AQ9UI33 1791 aa16.94■□□□□ 0.3
TRAPPC1-206ENST00000573989 MAPK8IP3Q9UPT6 1336 aa16.94■□□□□ 0.3
TRAPPC1-206ENST00000573989 PTF1AQ7RTS3 328 aa16.93■□□□□ 0.3
TRAPPC1-206ENST00000573989 CAMKK2Q96RR4 588 aa16.93■□□□□ 0.3
TRAPPC1-206ENST00000573989 GNAT3A8MTJ3 354 aa16.92■□□□□ 0.3
TRAPPC1-206ENST00000573989 HMGB2P26583 209 aaKnown RBP16.92■□□□□ 0.3
TRAPPC1-206ENST00000573989 CABP4P57796 275 aa16.92■□□□□ 0.3
TRAPPC1-206ENST00000573989 EZH2Q15910 746 aaKnown RBP16.92■□□□□ 0.3
TRAPPC1-206ENST00000573989 SMARCC1Q92922 1105 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC1-206ENST00000573989 PHACTR3Q96KR7 559 aa16.91■□□□□ 0.3
TRAPPC1-206ENST00000573989 RREB1Q92766 1687 aa16.91■□□□□ 0.3
TRAPPC1-206ENST00000573989 MAP3K5Q99683 1374 aa16.9■□□□□ 0.3
TRAPPC1-206ENST00000573989 RTF1Q92541 710 aaKnown RBP16.9■□□□□ 0.3
TRAPPC1-206ENST00000573989 KDM6AO15550 1401 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC1-206ENST00000573989 PIGBQ92521 554 aa16.89■□□□□ 0.29
TRAPPC1-206ENST00000573989 MRS2Q9HD23 443 aa16.89■□□□□ 0.29
TRAPPC1-206ENST00000573989 LY75O60449 1722 aa16.88■□□□□ 0.29
TRAPPC1-206ENST00000573989 RNMTO43148 476 aaKnown RBP16.88■□□□□ 0.29
TRAPPC1-206ENST00000573989 TXNRD1Q16881 649 aa16.88■□□□□ 0.29
TRAPPC1-206ENST00000573989 SLC27A3Q5K4L6 730 aa16.88■□□□□ 0.29
TRAPPC1-206ENST00000573989 NBPF14Q5TI25 921 aa16.88■□□□□ 0.29
TRAPPC1-206ENST00000573989 PLEKHF1Q96S99 279 aa16.88■□□□□ 0.29
TRAPPC1-206ENST00000573989 DLG5Q8TDM6 1919 aa16.88■□□□□ 0.29
TRAPPC1-206ENST00000573989 HTATSF1O43719 755 aaKnown RBP16.87■□□□□ 0.29
TRAPPC1-206ENST00000573989 ADAMTS8Q9UP79 889 aa16.87■□□□□ 0.29
TRAPPC1-206ENST00000573989 ADAMTS7Q9UKP4 1686 aa16.87■□□□□ 0.29
TRAPPC1-206ENST00000573989 NUP188Q5SRE5 1749 aa16.87■□□□□ 0.29
TRAPPC1-206ENST00000573989 TEFQ10587 303 aa16.86■□□□□ 0.29
TRAPPC1-206ENST00000573989 NFE2L2Q16236 605 aa16.86■□□□□ 0.29
TRAPPC1-206ENST00000573989 NFATC2IPQ8NCF5 419 aa16.86■□□□□ 0.29
TRAPPC1-206ENST00000573989 RUNDC1Q96C34 613 aa16.86■□□□□ 0.29
TRAPPC1-206ENST00000573989 SLC52A2Q9HAB3 445 aa16.86■□□□□ 0.29
TRAPPC1-206ENST00000573989 PALLDQ8WX93 1383 aa16.86■□□□□ 0.29
TRAPPC1-206ENST00000573989 DIEXFQ68CQ4 756 aaKnown RBP16.85■□□□□ 0.29
TRAPPC1-206ENST00000573989 LGR6Q9HBX8 967 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms