RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 FLT4P35916 1363 aa19.88■□□□□ 0.77
TVP23A-208ENST00000573857 KIF24Q5T7B8 1368 aa19.88■□□□□ 0.77
TVP23A-208ENST00000573857 CGNL1Q0VF96 1302 aa19.88■□□□□ 0.77
TVP23A-208ENST00000573857 HSP90AB2PQ58FF8 381 aa19.88■□□□□ 0.77
TVP23A-208ENST00000573857 USHBP1Q8N6Y0 703 aa19.88■□□□□ 0.77
TVP23A-208ENST00000573857 KAT6BQ8WYB5 2073 aa19.88■□□□□ 0.77
TVP23A-208ENST00000573857 SHANK3Q9BYB0 1731 aa19.88■□□□□ 0.77
TVP23A-208ENST00000573857 UTRNP46939 3433 aa19.87■□□□□ 0.77
TVP23A-208ENST00000573857 PRIM1P49642 420 aaKnown RBP19.87■□□□□ 0.77
TVP23A-208ENST00000573857 ZNF827Q17R98 1081 aa19.87■□□□□ 0.77
TVP23A-208ENST00000573857 SLC27A3Q5K4L6 730 aa19.87■□□□□ 0.77
TVP23A-208ENST00000573857 SYTL4Q96C24 671 aaPredicted RBP19.87■□□□□ 0.77
TVP23A-208ENST00000573857 MTFR1LQ9H019 292 aa19.87■□□□□ 0.77
TVP23A-208ENST00000573857 NSD2O96028 1365 aa19.86■□□□□ 0.77
TVP23A-208ENST00000573857 RAPGEF4Q8WZA2 1011 aa19.86■□□□□ 0.77
TVP23A-208ENST00000573857 DOT1LQ8TEK3 1739 aa19.85■□□□□ 0.77
TVP23A-208ENST00000573857 AKT1S1Q96B36 256 aa19.84■□□□□ 0.77
TVP23A-208ENST00000573857 SGIP1Q9BQI5 828 aa19.84■□□□□ 0.77
TVP23A-208ENST00000573857 EMILIN1Q9Y6C2 1016 aa19.84■□□□□ 0.77
TVP23A-208ENST00000573857 TATP17735 454 aaPredicted RBP19.83■□□□□ 0.77
TVP23A-208ENST00000573857 DCAF8L1A6NGE4 600 aa19.82■□□□□ 0.76
TVP23A-208ENST00000573857 PCDH11XQ9BZA7 1347 aa19.8■□□□□ 0.76
TVP23A-208ENST00000573857 PCDH11YQ9BZA8 1340 aa19.8■□□□□ 0.76
TVP23A-208ENST00000573857 KCNQ4P56696 695 aa19.8■□□□□ 0.76
TVP23A-208ENST00000573857 FHDC1Q9C0D6 1143 aaPredicted RBP19.8■□□□□ 0.76
TVP23A-208ENST00000573857 PPM1GO15355 546 aaPredicted RBP19.79■□□□□ 0.76
TVP23A-208ENST00000573857 YY1P25490 414 aa19.79■□□□□ 0.76
TVP23A-208ENST00000573857 NCAPD2Q15021 1401 aa19.78■□□□□ 0.76
TVP23A-208ENST00000573857 SYT17Q9BSW7 474 aa19.78■□□□□ 0.76
TVP23A-208ENST00000573857 LY75O60449 1722 aa19.78■□□□□ 0.76
TVP23A-208ENST00000573857 PNPLA7Q6ZV29 1317 aa19.77■□□□□ 0.76
TVP23A-208ENST00000573857 ANKRD26Q9UPS8 1709 aa19.77■□□□□ 0.76
TVP23A-208ENST00000573857 EIF4G2P78344 907 aaKnown RBP eCLIP19.77■□□□□ 0.76
TVP23A-208ENST00000573857 ARXQ96QS3 562 aa19.77■□□□□ 0.76
TVP23A-208ENST00000573857 POLR3GLQ9BT43 218 aa19.77■□□□□ 0.76
TVP23A-208ENST00000573857 TFCP2L1Q9NZI6 479 aa19.77■□□□□ 0.76
TVP23A-208ENST00000573857 CCNL1Q9UK58 526 aaPredicted RBP19.77■□□□□ 0.76
TVP23A-208ENST00000573857 WASHC2AQ641Q2 1341 aa19.76■□□□□ 0.75
TVP23A-208ENST00000573857 GOLGB1Q14789 3259 aaKnown RBP19.76■□□□□ 0.75
TVP23A-208ENST00000573857 CYP27B1O15528 508 aa19.76■□□□□ 0.75
TVP23A-208ENST00000573857 SLC16A10Q8TF71 515 aa19.76■□□□□ 0.75
TVP23A-208ENST00000573857 QSER1Q2KHR3 1735 aa19.76■□□□□ 0.75
TVP23A-208ENST00000573857 HSPA5P11021 654 aaKnown RBP19.75■□□□□ 0.75
TVP23A-208ENST00000573857 POLKQ9UBT6 870 aa19.75■□□□□ 0.75
TVP23A-208ENST00000573857 MAP3K5Q99683 1374 aa19.74■□□□□ 0.75
TVP23A-208ENST00000573857 CCER1Q8TC90 406 aaPredicted RBP19.74■□□□□ 0.75
TVP23A-208ENST00000573857 EYA1Q99502 592 aa19.73■□□□□ 0.75
TVP23A-208ENST00000573857 PKD1L3Q7Z443 1732 aa19.73■□□□□ 0.75
TVP23A-208ENST00000573857 TUBGCP6Q96RT7 1819 aa19.72■□□□□ 0.75
TVP23A-208ENST00000573857 MPRIPQ6WCQ1 1025 aa19.71■□□□□ 0.75
TVP23A-208ENST00000573857 PALLDQ8WX93 1383 aa19.7■□□□□ 0.74
TVP23A-208ENST00000573857 TNNT2P45379 298 aaPredicted RBP19.7■□□□□ 0.74
TVP23A-208ENST00000573857 SPG7Q9UQ90 795 aa19.7■□□□□ 0.74
TVP23A-208ENST00000573857 TOGARAM1Q9Y4F4 1720 aa19.7■□□□□ 0.74
TVP23A-208ENST00000573857 MAP2P11137 1827 aaKnown RBP19.69■□□□□ 0.74
TVP23A-208ENST00000573857 POLD1P28340 1107 aa19.69■□□□□ 0.74
TVP23A-208ENST00000573857 NKX1-1Q15270 411 aaPredicted RBP19.69■□□□□ 0.74
TVP23A-208ENST00000573857 PANK3Q9H999 370 aa19.69■□□□□ 0.74
TVP23A-208ENST00000573857 COL24A1Q17RW2 1714 aa19.68■□□□□ 0.74
TVP23A-208ENST00000573857 EIF4A2Q14240 407 aaKnown RBP19.68■□□□□ 0.74
TVP23A-208ENST00000573857 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.68■□□□□ 0.74
TVP23A-208ENST00000573857 COL23A1Q86Y22 540 aaPredicted RBP19.67■□□□□ 0.74
TVP23A-208ENST00000573857 PIGBQ92521 554 aa19.67■□□□□ 0.74
TVP23A-208ENST00000573857 SMARCC1Q92922 1105 aaPredicted RBP19.66■□□□□ 0.74
TVP23A-208ENST00000573857 C5P01031 1676 aa19.65■□□□□ 0.74
TVP23A-208ENST00000573857 MSH5O43196 834 aa19.65■□□□□ 0.74
TVP23A-208ENST00000573857 HMGB2P26583 209 aaKnown RBP19.65■□□□□ 0.74
TVP23A-208ENST00000573857 KLHL34Q8N239 644 aa19.64■□□□□ 0.73
TVP23A-208ENST00000573857 PLEKHG2Q9H7P9 1386 aa19.64■□□□□ 0.73
TVP23A-208ENST00000573857 ITGB4P16144 1822 aa19.64■□□□□ 0.73
TVP23A-208ENST00000573857 IGSF1Q8N6C5 1336 aa19.63■□□□□ 0.73
TVP23A-208ENST00000573857 PHKG2P15735 406 aa19.63■□□□□ 0.73
TVP23A-208ENST00000573857 IFNL2Q8IZJ0 200 aa19.63■□□□□ 0.73
TVP23A-208ENST00000573857 MSL1Q68DK7 614 aa19.61■□□□□ 0.73
TVP23A-208ENST00000573857 FLAD1Q8NFF5 587 aa19.61■□□□□ 0.73
TVP23A-208ENST00000573857 TMOD3Q9NYL9 352 aa19.61■□□□□ 0.73
TVP23A-208ENST00000573857 TAF1LQ8IZX4 1826 aa19.6■□□□□ 0.73
TVP23A-208ENST00000573857 AK7Q96M32 723 aa19.6■□□□□ 0.73
TVP23A-208ENST00000573857 C4BP0C0L5 1744 aa19.59■□□□□ 0.73
TVP23A-208ENST00000573857 LOC102724428A0A0B4J2F2 783 aa19.59■□□□□ 0.73
TVP23A-208ENST00000573857 SIK1P57059 783 aa19.59■□□□□ 0.73
TVP23A-208ENST00000573857 GPR162Q16538 588 aa19.59■□□□□ 0.73
TVP23A-208ENST00000573857 MORC1Q86VD1 984 aa19.59■□□□□ 0.73
TVP23A-208ENST00000573857 NLGN2Q8NFZ4 835 aa19.59■□□□□ 0.73
TVP23A-208ENST00000573857 ASAP1Q9ULH1 1129 aa19.59■□□□□ 0.73
TVP23A-208ENST00000573857 AMIGO3Q86WK7 504 aa19.58■□□□□ 0.72
TVP23A-208ENST00000573857 KNSTRNQ9Y448 316 aa19.58■□□□□ 0.72
TVP23A-208ENST00000573857 ZNF784Q8NCA9 323 aaPredicted RBP19.57■□□□□ 0.72
TVP23A-208ENST00000573857 LINC00116Q8NCU8 138 aa19.56■□□□□ 0.72
TVP23A-208ENST00000573857 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.55■□□□□ 0.72
TVP23A-208ENST00000573857 PHF14O94880 888 aa19.55■□□□□ 0.72
TVP23A-208ENST00000573857 PELP1Q8IZL8 1130 aaKnown RBP19.55■□□□□ 0.72
TVP23A-208ENST00000573857 ATG3Q9NT62 314 aa19.55■□□□□ 0.72
TVP23A-208ENST00000573857 ITPK1Q13572 414 aa19.54■□□□□ 0.72
TVP23A-208ENST00000573857 PLEKHO1Q53GL0 409 aaPredicted RBP19.54■□□□□ 0.72
TVP23A-208ENST00000573857 KIF7Q2M1P5 1343 aa19.53■□□□□ 0.72
TVP23A-208ENST00000573857 ERVV-2B6SEH9 535 aa19.53■□□□□ 0.72
TVP23A-208ENST00000573857 HSP90AB1P08238 724 aaKnown RBP19.53■□□□□ 0.72
TVP23A-208ENST00000573857 SSFA2P28290 1259 aa19.53■□□□□ 0.72
TVP23A-208ENST00000573857 AMOTQ4VCS5 1084 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms