RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 TEFQ10587 303 aa17.76■□□□□ 0.43
TVP23A-207ENST00000573360 SLC4A10Q6U841 1118 aa17.76■□□□□ 0.43
TVP23A-207ENST00000573360 ZNF142P52746 1687 aaPredicted RBP17.75■□□□□ 0.43
TVP23A-207ENST00000573360 GNAT3A8MTJ3 354 aa17.75■□□□□ 0.43
TVP23A-207ENST00000573360 ZKSCAN2Q63HK3 967 aa17.75■□□□□ 0.43
TVP23A-207ENST00000573360 CCDC9Q9Y3X0 531 aaKnown RBP17.75■□□□□ 0.43
TVP23A-207ENST00000573360 INSRP06213 1382 aa17.75■□□□□ 0.43
TVP23A-207ENST00000573360 DDX54Q8TDD1 881 aaKnown RBP17.75■□□□□ 0.43
TVP23A-207ENST00000573360 PHF23Q9BUL5 403 aaPredicted RBP17.75■□□□□ 0.43
TVP23A-207ENST00000573360 KIAA0232Q92628 1395 aa17.74■□□□□ 0.43
TVP23A-207ENST00000573360 SHPRHQ149N8 1683 aa17.74■□□□□ 0.43
TVP23A-207ENST00000573360 ADGRB2O60241 1585 aa17.74■□□□□ 0.43
TVP23A-207ENST00000573360 MST1RQ04912 1400 aa17.74■□□□□ 0.43
TVP23A-207ENST00000573360 CFAP44Q96MT7 982 aa17.74■□□□□ 0.43
TVP23A-207ENST00000573360 C1orf115Q9H7X2 142 aa17.73■□□□□ 0.43
TVP23A-207ENST00000573360 DZIP1LQ8IYY4 767 aaKnown RBP17.73■□□□□ 0.43
TVP23A-207ENST00000573360 IGSF1Q8N6C5 1336 aa17.72■□□□□ 0.43
TVP23A-207ENST00000573360 TRIM27P14373 513 aa17.71■□□□□ 0.43
TVP23A-207ENST00000573360 ANXA1P04083 346 aa17.71■□□□□ 0.43
TVP23A-207ENST00000573360 IFT57Q9NWB7 429 aa17.71■□□□□ 0.43
TVP23A-207ENST00000573360 IL17REQ8NFR9 667 aa17.71■□□□□ 0.43
TVP23A-207ENST00000573360 UBAP1LF5GYI3 381 aa17.7■□□□□ 0.42
TVP23A-207ENST00000573360 PLEKHO1Q53GL0 409 aaPredicted RBP17.7■□□□□ 0.42
TVP23A-207ENST00000573360 SPATA31A3Q5VYP0 1347 aa17.7■□□□□ 0.42
TVP23A-207ENST00000573360 SLC4A2P04920 1241 aa17.69■□□□□ 0.42
TVP23A-207ENST00000573360 SLC4A3P48751 1232 aa17.69■□□□□ 0.42
TVP23A-207ENST00000573360 APBB1O00213 710 aa17.69■□□□□ 0.42
TVP23A-207ENST00000573360 KCNQ3O43525 872 aa17.69■□□□□ 0.42
TVP23A-207ENST00000573360 VAMP4O75379 141 aa17.69■□□□□ 0.42
TVP23A-207ENST00000573360 TMEM57Q8N5G2 664 aa17.69■□□□□ 0.42
TVP23A-207ENST00000573360 SLC39A6Q13433 755 aa17.69■□□□□ 0.42
TVP23A-207ENST00000573360 ARXQ96QS3 562 aa17.69■□□□□ 0.42
TVP23A-207ENST00000573360 MON2Q7Z3U7 1717 aa17.69■□□□□ 0.42
TVP23A-207ENST00000573360 IQSEC2Q5JU85 1478 aa17.68■□□□□ 0.42
TVP23A-207ENST00000573360 F6X3S4 739 aa17.68■□□□□ 0.42
TVP23A-207ENST00000573360 FMN2Q9NZ56 1722 aa17.68■□□□□ 0.42
TVP23A-207ENST00000573360 TATP17735 454 aaPredicted RBP17.67■□□□□ 0.42
TVP23A-207ENST00000573360 ATF7IPQ6VMQ6 1270 aa17.67■□□□□ 0.42
TVP23A-207ENST00000573360 KAT6BQ8WYB5 2073 aa17.67■□□□□ 0.42
TVP23A-207ENST00000573360 ZNF330Q9Y3S2 320 aaPredicted RBP17.67■□□□□ 0.42
TVP23A-207ENST00000573360 IPO8O15397 1037 aaKnown RBP17.66■□□□□ 0.42
TVP23A-207ENST00000573360 PIK3C2AO00443 1686 aa17.66■□□□□ 0.42
TVP23A-207ENST00000573360 ERBB3P21860 1342 aa17.66■□□□□ 0.42
TVP23A-207ENST00000573360 SYTL4Q96C24 671 aaPredicted RBP17.66■□□□□ 0.42
TVP23A-207ENST00000573360 BACH2Q9BYV9 841 aa17.66■□□□□ 0.42
TVP23A-207ENST00000573360 BTG4Q9NY30 223 aa17.66■□□□□ 0.42
TVP23A-207ENST00000573360 PIP4K2AP48426 406 aaPredicted RBP17.66■□□□□ 0.42
TVP23A-207ENST00000573360 AKAP12Q02952 1782 aa17.65■□□□□ 0.42
TVP23A-207ENST00000573360 ARHGEF10O15013 1369 aa17.65■□□□□ 0.42
TVP23A-207ENST00000573360 BTBD11A6QL63 1104 aa17.65■□□□□ 0.42
TVP23A-207ENST00000573360 LARP1Q6PKG0 1096 aaKnown RBP17.65■□□□□ 0.42
TVP23A-207ENST00000573360 STK31Q9BXU1 1019 aa17.65■□□□□ 0.42
TVP23A-207ENST00000573360 IL16Q14005 1332 aa17.64■□□□□ 0.41
TVP23A-207ENST00000573360 FKBP5Q13451 457 aaPredicted RBP17.63■□□□□ 0.41
TVP23A-207ENST00000573360 TAF7Q15545 349 aaPredicted RBP17.63■□□□□ 0.41
TVP23A-207ENST00000573360 IGHDP01880 384 aa17.63■□□□□ 0.41
TVP23A-207ENST00000573360 CHL1O00533 1208 aa17.62■□□□□ 0.41
TVP23A-207ENST00000573360 G2E3Q7L622 706 aa17.62■□□□□ 0.41
TVP23A-207ENST00000573360 PEAK1Q9H792 1746 aa17.62■□□□□ 0.41
TVP23A-207ENST00000573360 AIMP1Q12904 312 aaKnown RBP17.62■□□□□ 0.41
TVP23A-207ENST00000573360 PDE3AQ14432 1141 aa17.62■□□□□ 0.41
TVP23A-207ENST00000573360 PCDHB15Q9Y5E8 787 aa17.62■□□□□ 0.41
TVP23A-207ENST00000573360 TOPAZ1Q8N9V7 1692 aa17.62■□□□□ 0.41
TVP23A-207ENST00000573360 HDGFL1Q5TGJ6 251 aa17.61■□□□□ 0.41
TVP23A-207ENST00000573360 NFATC2IPQ8NCF5 419 aa17.61■□□□□ 0.41
TVP23A-207ENST00000573360 RTN4Q9NQC3 1192 aaKnown RBP17.61■□□□□ 0.41
TVP23A-207ENST00000573360 MVPQ14764 893 aaKnown RBP17.61■□□□□ 0.41
TVP23A-207ENST00000573360 KIF16BQ96L93 1317 aa17.61■□□□□ 0.41
TVP23A-207ENST00000573360 MAP3K5Q99683 1374 aa17.61■□□□□ 0.41
TVP23A-207ENST00000573360 ANKRD26Q9UPS8 1709 aa17.6■□□□□ 0.41
TVP23A-207ENST00000573360 PRAMEF22A3QJZ6 481 aa17.6■□□□□ 0.41
TVP23A-207ENST00000573360 TNS3Q68CZ2 1445 aa17.6■□□□□ 0.41
TVP23A-207ENST00000573360 STRCP1A6NGW2 1772 aa17.6■□□□□ 0.41
TVP23A-207ENST00000573360 PTCD1O75127 700 aaKnown RBP17.6■□□□□ 0.41
TVP23A-207ENST00000573360 MS4A1P11836 297 aa17.6■□□□□ 0.41
TVP23A-207ENST00000573360 ZNF853P0CG23 659 aa17.59■□□□□ 0.41
TVP23A-207ENST00000573360 MRPL50Q8N5N7 158 aaKnown RBP17.59■□□□□ 0.41
TVP23A-207ENST00000573360 USP19O94966 1318 aa17.58■□□□□ 0.4
TVP23A-207ENST00000573360 TOM1O60784 492 aa17.57■□□□□ 0.4
TVP23A-207ENST00000573360 SPG7Q9UQ90 795 aa17.57■□□□□ 0.4
TVP23A-207ENST00000573360 MYL6BP14649 208 aa17.57■□□□□ 0.4
TVP23A-207ENST00000573360 AMOTQ4VCS5 1084 aa17.57■□□□□ 0.4
TVP23A-207ENST00000573360 AKAP4Q5JQC9 854 aa17.57■□□□□ 0.4
TVP23A-207ENST00000573360 DDRGK1Q96HY6 314 aa17.57■□□□□ 0.4
TVP23A-207ENST00000573360 NRKQ7Z2Y5 1582 aa17.56■□□□□ 0.4
TVP23A-207ENST00000573360 RNMTO43148 476 aaKnown RBP17.56■□□□□ 0.4
TVP23A-207ENST00000573360 SOS2Q07890 1332 aaPredicted RBP17.56■□□□□ 0.4
TVP23A-207ENST00000573360 CABP4P57796 275 aa17.56■□□□□ 0.4
TVP23A-207ENST00000573360 PHAXQ9H814 394 aaKnown RBP17.56■□□□□ 0.4
TVP23A-207ENST00000573360 DDX19BQ9UMR2 479 aa17.56■□□□□ 0.4
TVP23A-207ENST00000573360 KDRP35968 1356 aa17.55■□□□□ 0.4
TVP23A-207ENST00000573360 TTC5Q8N0Z6 440 aa17.55■□□□□ 0.4
TVP23A-207ENST00000573360 CT47B1P0C2W7 299 aaPredicted RBP17.54■□□□□ 0.4
TVP23A-207ENST00000573360 C8orf37Q96NL8 207 aa17.54■□□□□ 0.4
TVP23A-207ENST00000573360 STRCQ7RTU9 1775 aa17.54■□□□□ 0.4
TVP23A-207ENST00000573360 RTL1A6NKG5 1358 aa17.54■□□□□ 0.4
TVP23A-207ENST00000573360 ALDH1L2Q3SY69 923 aa17.53■□□□□ 0.4
TVP23A-207ENST00000573360 CENPQQ7L2Z9 268 aaPredicted RBP17.53■□□□□ 0.4
TVP23A-207ENST00000573360 IFNL2Q8IZJ0 200 aa17.53■□□□□ 0.4
TVP23A-207ENST00000573360 CHPF2Q9P2E5 772 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms