RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 OVOS2A0A0G2JMS6 1433 aa12.53□□□□□ -0.4
NDE1-207ENST00000573203 DISP2A7MBM2 1401 aa12.53□□□□□ -0.4
NDE1-207ENST00000573203 PEAK1Q9H792 1746 aa12.52□□□□□ -0.41
NDE1-207ENST00000573203 EXOC5O00471 708 aa12.52□□□□□ -0.41
NDE1-207ENST00000573203 APBA3O96018 575 aa12.52□□□□□ -0.41
NDE1-207ENST00000573203 HOXC9P31274 260 aa12.52□□□□□ -0.41
NDE1-207ENST00000573203 RRS1Q15050 365 aaKnown RBP12.52□□□□□ -0.41
NDE1-207ENST00000573203 CGNL1Q0VF96 1302 aa12.52□□□□□ -0.41
NDE1-207ENST00000573203 SBF2Q86WG5 1849 aa12.51□□□□□ -0.41
NDE1-207ENST00000573203 RTL1A6NKG5 1358 aa12.51□□□□□ -0.41
NDE1-207ENST00000573203 IL2RBP14784 551 aa12.5□□□□□ -0.41
NDE1-207ENST00000573203 MARCH10Q8NA82 808 aaPredicted RBP12.5□□□□□ -0.41
NDE1-207ENST00000573203 TNS2Q63HR2 1409 aa12.5□□□□□ -0.41
NDE1-207ENST00000573203 RGPD2P0DJD1 1756 aa12.5□□□□□ -0.41
NDE1-207ENST00000573203 EZH2Q15910 746 aaKnown RBP12.49□□□□□ -0.41
NDE1-207ENST00000573203 PANK3Q9H999 370 aa12.49□□□□□ -0.41
NDE1-207ENST00000573203 ANKRD26Q9UPS8 1709 aa12.48□□□□□ -0.41
NDE1-207ENST00000573203 SMG6Q86US8 1419 aaKnown RBP12.48□□□□□ -0.41
NDE1-207ENST00000573203 MAP2P11137 1827 aaKnown RBP12.48□□□□□ -0.41
NDE1-207ENST00000573203 FLT4P35916 1363 aa12.47□□□□□ -0.41
NDE1-207ENST00000573203 PARD3Q8TEW0 1356 aa12.47□□□□□ -0.41
NDE1-207ENST00000573203 CAMKK2Q96RR4 588 aa12.47□□□□□ -0.41
NDE1-207ENST00000573203 KIF24Q5T7B8 1368 aa12.46□□□□□ -0.41
NDE1-207ENST00000573203 KAT6BQ8WYB5 2073 aa12.46□□□□□ -0.41
NDE1-207ENST00000573203 PPM1GO15355 546 aaPredicted RBP12.46□□□□□ -0.41
NDE1-207ENST00000573203 HSP90AB2PQ58FF8 381 aa12.46□□□□□ -0.41
NDE1-207ENST00000573203 EMILIN1Q9Y6C2 1016 aa12.46□□□□□ -0.41
NDE1-207ENST00000573203 BCL9O00512 1426 aa12.45□□□□□ -0.42
NDE1-207ENST00000573203 INSRP06213 1382 aa12.45□□□□□ -0.42
NDE1-207ENST00000573203 RREB1Q92766 1687 aa12.45□□□□□ -0.42
NDE1-207ENST00000573203 KIF7Q2M1P5 1343 aa12.45□□□□□ -0.42
NDE1-207ENST00000573203 BCL11BQ9C0K0 894 aaPredicted RBP12.45□□□□□ -0.42
NDE1-207ENST00000573203 PSDA5PKW4 1024 aaPredicted RBP12.44□□□□□ -0.42
NDE1-207ENST00000573203 TNNT2P45379 298 aaPredicted RBP12.44□□□□□ -0.42
NDE1-207ENST00000573203 NBPF6Q5VWK0 638 aa12.44□□□□□ -0.42
NDE1-207ENST00000573203 NBPF4Q96M43 638 aa12.44□□□□□ -0.42
NDE1-207ENST00000573203 NUP188Q5SRE5 1749 aa12.44□□□□□ -0.42
NDE1-207ENST00000573203 RGPD3A6NKT7 1758 aaPredicted RBP12.43□□□□□ -0.42
NDE1-207ENST00000573203 RGPD4Q7Z3J3 1758 aa12.43□□□□□ -0.42
NDE1-207ENST00000573203 PRKAR2AP13861 404 aaKnown RBP12.43□□□□□ -0.42
NDE1-207ENST00000573203 FKBP8Q14318 412 aa12.43□□□□□ -0.42
NDE1-207ENST00000573203 PTF1AQ7RTS3 328 aa12.43□□□□□ -0.42
NDE1-207ENST00000573203 USHBP1Q8N6Y0 703 aa12.43□□□□□ -0.42
NDE1-207ENST00000573203 DDX54Q8TDD1 881 aaKnown RBP12.43□□□□□ -0.42
NDE1-207ENST00000573203 KNSTRNQ9Y448 316 aa12.43□□□□□ -0.42
NDE1-207ENST00000573203 NSD2O96028 1365 aa12.43□□□□□ -0.42
NDE1-207ENST00000573203 NHSQ6T4R5 1651 aa12.42□□□□□ -0.42
NDE1-207ENST00000573203 PLSCR1O15162 318 aa12.42□□□□□ -0.42
NDE1-207ENST00000573203 R3HDM1Q15032 1099 aaKnown RBP12.42□□□□□ -0.42
NDE1-207ENST00000573203 RAPGEF4Q8WZA2 1011 aa12.42□□□□□ -0.42
NDE1-207ENST00000573203 ACSBG1Q96GR2 724 aa12.42□□□□□ -0.42
NDE1-207ENST00000573203 POLKQ9UBT6 870 aa12.42□□□□□ -0.42
NDE1-207ENST00000573203 MEGF6O75095 1541 aa12.42□□□□□ -0.42
NDE1-207ENST00000573203 KCNQ2O43526 872 aa12.41□□□□□ -0.42
NDE1-207ENST00000573203 TATP17735 454 aaPredicted RBP12.41□□□□□ -0.42
NDE1-207ENST00000573203 NBPF14Q5TI25 921 aa12.41□□□□□ -0.42
NDE1-207ENST00000573203 MORC1Q86VD1 984 aa12.41□□□□□ -0.42
NDE1-207ENST00000573203 ZCRB1Q8TBF4 217 aaKnown RBP12.41□□□□□ -0.42
NDE1-207ENST00000573203 WASHC2AQ641Q2 1341 aa12.4□□□□□ -0.42
NDE1-207ENST00000573203 SHANK3Q9BYB0 1731 aa12.4□□□□□ -0.42
NDE1-207ENST00000573203 BTAF1O14981 1849 aa12.39□□□□□ -0.43
NDE1-207ENST00000573203 DOT1LQ8TEK3 1739 aa12.38□□□□□ -0.43
NDE1-207ENST00000573203 SRCAPQ6ZRS2 3230 aa12.38□□□□□ -0.43
NDE1-207ENST00000573203 ZNF316A6NFI3 1004 aaPredicted RBP12.37□□□□□ -0.43
NDE1-207ENST00000573203 SYTL4Q96C24 671 aaPredicted RBP12.37□□□□□ -0.43
NDE1-207ENST00000573203 EYA1Q99502 592 aa12.37□□□□□ -0.43
NDE1-207ENST00000573203 EIF4A2Q14240 407 aaKnown RBP12.36□□□□□ -0.43
NDE1-207ENST00000573203 TXNRD1Q16881 649 aa12.36□□□□□ -0.43
NDE1-207ENST00000573203 AMER1Q5JTC6 1135 aaPredicted RBP12.36□□□□□ -0.43
NDE1-207ENST00000573203 LRP5O75197 1615 aa12.36□□□□□ -0.43
NDE1-207ENST00000573203 NCAPD2Q15021 1401 aa12.36□□□□□ -0.43
NDE1-207ENST00000573203 PCDH11XQ9BZA7 1347 aa12.36□□□□□ -0.43
NDE1-207ENST00000573203 PCDH11YQ9BZA8 1340 aa12.36□□□□□ -0.43
NDE1-207ENST00000573203 PKD1L3Q7Z443 1732 aa12.35□□□□□ -0.43
NDE1-207ENST00000573203 PRIM1P49642 420 aaKnown RBP12.35□□□□□ -0.43
NDE1-207ENST00000573203 ANO8Q9HCE9 1232 aaPredicted RBP12.34□□□□□ -0.43
NDE1-207ENST00000573203 SPG7Q9UQ90 795 aa12.34□□□□□ -0.43
NDE1-207ENST00000573203 PER1O15534 1290 aaPredicted RBP12.33□□□□□ -0.44
NDE1-207ENST00000573203 CC2D1BQ5T0F9 858 aaKnown RBP12.33□□□□□ -0.44
NDE1-207ENST00000573203 STK32BQ9NY57 414 aa12.33□□□□□ -0.44
NDE1-207ENST00000573203 CYP27B1O15528 508 aa12.32□□□□□ -0.44
NDE1-207ENST00000573203 CNGB1Q14028 1251 aaPredicted RBP12.32□□□□□ -0.44
NDE1-207ENST00000573203 IGSF1Q8N6C5 1336 aa12.32□□□□□ -0.44
NDE1-207ENST00000573203 ITGB4P16144 1822 aa12.3□□□□□ -0.44
NDE1-207ENST00000573203 CHADLQ6NUI6 762 aa12.3□□□□□ -0.44
NDE1-207ENST00000573203 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.3□□□□□ -0.441e-8■□□□□ 10
NDE1-207ENST00000573203 LY75O60449 1722 aa12.29□□□□□ -0.44
NDE1-207ENST00000573203 TOGARAM1Q9Y4F4 1720 aa12.29□□□□□ -0.44
NDE1-207ENST00000573203 MTHFSP49914 203 aa12.29□□□□□ -0.44
NDE1-207ENST00000573203 SLC15A2Q16348 729 aa12.29□□□□□ -0.44
NDE1-207ENST00000573203 SLC27A3Q5K4L6 730 aa12.29□□□□□ -0.44
NDE1-207ENST00000573203 NPC1L1Q9UHC9 1359 aa12.29□□□□□ -0.44
NDE1-207ENST00000573203 CASZ1Q86V15 1759 aa12.28□□□□□ -0.44
NDE1-207ENST00000573203 NKX1-1Q15270 411 aaPredicted RBP12.28□□□□□ -0.44
NDE1-207ENST00000573203 MPRIPQ6WCQ1 1025 aa12.28□□□□□ -0.44
NDE1-207ENST00000573203 IFNL2Q8IZJ0 200 aa12.28□□□□□ -0.44
NDE1-207ENST00000573203 SPON1Q9HCB6 807 aa12.28□□□□□ -0.44
NDE1-207ENST00000573203 CREBZFQ9NS37 354 aa12.28□□□□□ -0.44
NDE1-207ENST00000573203 LRRC4BQ9NT99 713 aa12.28□□□□□ -0.44
NDE1-207ENST00000573203 PAPPAQ13219 1627 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms