RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 MON2Q7Z3U7 1717 aa17.45■□□□□ 0.38
SMIM28-201ENST00000573100 QSER1Q2KHR3 1735 aa17.44■□□□□ 0.38
SMIM28-201ENST00000573100 LTN1O94822 1766 aa17.44■□□□□ 0.38
SMIM28-201ENST00000573100 EDC4Q6P2E9 1401 aaKnown RBP17.44■□□□□ 0.38
SMIM28-201ENST00000573100 COL24A1Q17RW2 1714 aa17.44■□□□□ 0.38
SMIM28-201ENST00000573100 SHANK3Q9BYB0 1731 aa17.44■□□□□ 0.38
SMIM28-201ENST00000573100 ATP10DQ9P241 1426 aa17.42■□□□□ 0.38
SMIM28-201ENST00000573100 MSL1Q68DK7 614 aa17.42■□□□□ 0.38
SMIM28-201ENST00000573100 GPBP1L1Q9HC44 474 aaPredicted RBP17.42■□□□□ 0.38
SMIM28-201ENST00000573100 CD2APQ9Y5K6 639 aa17.42■□□□□ 0.38
SMIM28-201ENST00000573100 USP54Q70EL1 1684 aa17.42■□□□□ 0.38
SMIM28-201ENST00000573100 NSD2O96028 1365 aa17.41■□□□□ 0.38
SMIM28-201ENST00000573100 AMPHP49418 695 aa17.41■□□□□ 0.38
SMIM28-201ENST00000573100 CARD11Q9BXL7 1154 aa17.41■□□□□ 0.38
SMIM28-201ENST00000573100 USP47Q96K76 1375 aa17.4■□□□□ 0.38
SMIM28-201ENST00000573100 HMGB2P26583 209 aaKnown RBP17.4■□□□□ 0.38
SMIM28-201ENST00000573100 HOXC9P31274 260 aa17.4■□□□□ 0.38
SMIM28-201ENST00000573100 FLAD1Q8NFF5 587 aa17.39■□□□□ 0.37
SMIM28-201ENST00000573100 COG3Q96JB2 828 aa17.39■□□□□ 0.37
SMIM28-201ENST00000573100 PUS7Q96PZ0 661 aaKnown RBP17.39■□□□□ 0.37
SMIM28-201ENST00000573100 MAP3K19Q56UN5 1328 aa17.39■□□□□ 0.37
SMIM28-201ENST00000573100 A0A1W2PP64 1363 aa17.39■□□□□ 0.37
SMIM28-201ENST00000573100 TUBGCP6Q96RT7 1819 aa17.37■□□□□ 0.37
SMIM28-201ENST00000573100 HSPA6P17066 643 aa17.37■□□□□ 0.37
SMIM28-201ENST00000573100 FBLN1P23142 703 aa17.37■□□□□ 0.37
SMIM28-201ENST00000573100 LY75O60449 1722 aa17.36■□□□□ 0.37
SMIM28-201ENST00000573100 ZNF526Q8TF50 670 aaPredicted RBP17.36■□□□□ 0.37
SMIM28-201ENST00000573100 CGNL1Q0VF96 1302 aa17.36■□□□□ 0.37
SMIM28-201ENST00000573100 NBPF6Q5VWK0 638 aa17.35■□□□□ 0.37
SMIM28-201ENST00000573100 RAPGEF4Q8WZA2 1011 aa17.35■□□□□ 0.37
SMIM28-201ENST00000573100 NBPF4Q96M43 638 aa17.35■□□□□ 0.37
SMIM28-201ENST00000573100 MEGF6O75095 1541 aa17.34■□□□□ 0.37
SMIM28-201ENST00000573100 FAM208AQ9UK61 1670 aaKnown RBP17.34■□□□□ 0.37
SMIM28-201ENST00000573100 DOT1LQ8TEK3 1739 aa17.33■□□□□ 0.37
SMIM28-201ENST00000573100 TATP17735 454 aaPredicted RBP17.32■□□□□ 0.36
SMIM28-201ENST00000573100 MPRIPQ6WCQ1 1025 aa17.32■□□□□ 0.36
SMIM28-201ENST00000573100 USHBP1Q8N6Y0 703 aa17.32■□□□□ 0.36
SMIM28-201ENST00000573100 ADCY9O60503 1353 aa17.31■□□□□ 0.36
SMIM28-201ENST00000573100 PALLDQ8WX93 1383 aa17.3■□□□□ 0.36
SMIM28-201ENST00000573100 RRS1Q15050 365 aaKnown RBP17.3■□□□□ 0.36
SMIM28-201ENST00000573100 AK7Q96M32 723 aa17.3■□□□□ 0.36
SMIM28-201ENST00000573100 IGSF1Q8N6C5 1336 aa17.29■□□□□ 0.36
SMIM28-201ENST00000573100 SMARCC1Q92922 1105 aaPredicted RBP17.29■□□□□ 0.36
SMIM28-201ENST00000573100 WWC3Q9ULE0 1092 aa17.29■□□□□ 0.36
SMIM28-201ENST00000573100 PCDH11XQ9BZA7 1347 aa17.28■□□□□ 0.36
SMIM28-201ENST00000573100 PCDH11YQ9BZA8 1340 aa17.28■□□□□ 0.36
SMIM28-201ENST00000573100 RTL1A6NKG5 1358 aa17.28■□□□□ 0.36
SMIM28-201ENST00000573100 SLC24A1O60721 1099 aa17.27■□□□□ 0.36
SMIM28-201ENST00000573100 RGPD2P0DJD1 1756 aa17.27■□□□□ 0.35
SMIM28-201ENST00000573100 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.26■□□□□ 0.35
SMIM28-201ENST00000573100 PHF14O94880 888 aa17.26■□□□□ 0.35
SMIM28-201ENST00000573100 AMIGO3Q86WK7 504 aa17.26■□□□□ 0.35
SMIM28-201ENST00000573100 TESK2Q96S53 571 aa17.26■□□□□ 0.35
SMIM28-201ENST00000573100 SMG6Q86US8 1419 aaKnown RBP17.26■□□□□ 0.35
SMIM28-201ENST00000573100 KIF3CO14782 793 aa17.25■□□□□ 0.35
SMIM28-201ENST00000573100 FYB1O15117 783 aa17.25■□□□□ 0.35
SMIM28-201ENST00000573100 CYP27B1O15528 508 aa17.25■□□□□ 0.35
SMIM28-201ENST00000573100 HSP90AB2PQ58FF8 381 aa17.25■□□□□ 0.35
SMIM28-201ENST00000573100 SMIM5Q71RC9 77 aa17.25■□□□□ 0.35
SMIM28-201ENST00000573100 GGNBP2Q9H3C7 697 aa17.25■□□□□ 0.35
SMIM28-201ENST00000573100 C5P01031 1676 aa17.24■□□□□ 0.35
SMIM28-201ENST00000573100 ST20-MTHFSA0A0A6YYL1 179 aa17.24■□□□□ 0.35
SMIM28-201ENST00000573100 SSFA2P28290 1259 aa17.23■□□□□ 0.35
SMIM28-201ENST00000573100 PIGBQ92521 554 aa17.23■□□□□ 0.35
SMIM28-201ENST00000573100 NSD3Q9BZ95 1437 aa17.22■□□□□ 0.35
SMIM28-201ENST00000573100 APLP1P51693 650 aa17.22■□□□□ 0.35
SMIM28-201ENST00000573100 INSRP06213 1382 aa17.22■□□□□ 0.35
SMIM28-201ENST00000573100 LOC102724428A0A0B4J2F2 783 aa17.21■□□□□ 0.35
SMIM28-201ENST00000573100 SIK1P57059 783 aa17.21■□□□□ 0.35
SMIM28-201ENST00000573100 LINC00116Q8NCU8 138 aa17.2■□□□□ 0.34
SMIM28-201ENST00000573100 C4BP0C0L5 1744 aa17.2■□□□□ 0.34
SMIM28-201ENST00000573100 TAF1LQ8IZX4 1826 aa17.19■□□□□ 0.34
SMIM28-201ENST00000573100 TOMM70O94826 608 aa17.19■□□□□ 0.34
SMIM28-201ENST00000573100 NKX1-1Q15270 411 aaPredicted RBP17.19■□□□□ 0.34
SMIM28-201ENST00000573100 FLT4P35916 1363 aa17.18■□□□□ 0.34
SMIM28-201ENST00000573100 GNPATO15228 680 aa17.18■□□□□ 0.34
SMIM28-201ENST00000573100 MMP10P09238 476 aa17.18■□□□□ 0.34
SMIM28-201ENST00000573100 DNAJC5GQ8N7S2 189 aa17.18■□□□□ 0.34
SMIM28-201ENST00000573100 SPG7Q9UQ90 795 aa17.18■□□□□ 0.34
SMIM28-201ENST00000573100 KIF24Q5T7B8 1368 aa17.17■□□□□ 0.34
SMIM28-201ENST00000573100 TONSLQ96HA7 1378 aa17.17■□□□□ 0.34
SMIM28-201ENST00000573100 ATP6V1AP38606 617 aa17.17■□□□□ 0.34
SMIM28-201ENST00000573100 TMOD3Q9NYL9 352 aa17.17■□□□□ 0.34
SMIM28-201ENST00000573100 TGFB2P61812 414 aa17.16■□□□□ 0.34
SMIM28-201ENST00000573100 ITPK1Q13572 414 aa17.16■□□□□ 0.34
SMIM28-201ENST00000573100 ASAP1Q9ULH1 1129 aa17.16■□□□□ 0.34
SMIM28-201ENST00000573100 BCS1LQ9Y276 419 aa17.16■□□□□ 0.34
SMIM28-201ENST00000573100 A0A0G2JLW4 131 aa17.15■□□□□ 0.34
SMIM28-201ENST00000573100 ARHGAP27Q6ZUM4 889 aa17.15■□□□□ 0.34
SMIM28-201ENST00000573100 UBR3Q6ZT12 1888 aa17.15■□□□□ 0.34
SMIM28-201ENST00000573100 TMF1P82094 1093 aa17.14■□□□□ 0.33
SMIM28-201ENST00000573100 TRAPPC3LQ5T215 181 aa17.14■□□□□ 0.33
SMIM28-201ENST00000573100 NLGN1Q8N2Q7 840 aa17.14■□□□□ 0.33
SMIM28-201ENST00000573100 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.14■□□□□ 0.33
SMIM28-201ENST00000573100 TOGARAM1Q9Y4F4 1720 aa17.13■□□□□ 0.33
SMIM28-201ENST00000573100 ITGB4P16144 1822 aa17.13■□□□□ 0.33
SMIM28-201ENST00000573100 PPM1GO15355 546 aaPredicted RBP17.13■□□□□ 0.33
SMIM28-201ENST00000573100 NMRK2Q9NPI5 230 aa17.13■□□□□ 0.33
SMIM28-201ENST00000573100 EMILIN1Q9Y6C2 1016 aa17.13■□□□□ 0.33
SMIM28-201ENST00000573100 RTCBQ9Y3I0 505 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms