RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 PARP4Q9UKK3 1724 aaKnown RBP31.05■■■□□ 2.56
TVP23A-206ENST00000572980 FCHSD2O94868 740 aa31.05■■■□□ 2.56
TVP23A-206ENST00000572980 OVOS2A0A0G2JMS6 1433 aa31.04■■■□□ 2.56
TVP23A-206ENST00000572980 PLEKHG2Q9H7P9 1386 aa31.03■■■□□ 2.56
TVP23A-206ENST00000572980 CCER2I3L3R5 266 aa31.03■■■□□ 2.56
TVP23A-206ENST00000572980 PDE3BQ13370 1112 aa31.02■■■□□ 2.56
TVP23A-206ENST00000572980 ZCRB1Q8TBF4 217 aaKnown RBP31.02■■■□□ 2.56
TVP23A-206ENST00000572980 RSPH6AQ9H0K4 717 aa31.01■■■□□ 2.56
TVP23A-206ENST00000572980 PNNQ9H307 717 aaKnown RBP31.01■■■□□ 2.56
TVP23A-206ENST00000572980 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.01■■■□□ 2.56
TVP23A-206ENST00000572980 SPG7Q9UQ90 795 aa31■■■□□ 2.55
TVP23A-206ENST00000572980 LRRC37A3O60309 1634 aa31■■■□□ 2.55
TVP23A-206ENST00000572980 PRKAR2BP31323 418 aa30.99■■■□□ 2.55
TVP23A-206ENST00000572980 AMOTQ4VCS5 1084 aa30.99■■■□□ 2.55
TVP23A-206ENST00000572980 PLEKHO1Q53GL0 409 aaPredicted RBP30.99■■■□□ 2.55
TVP23A-206ENST00000572980 TNS2Q63HR2 1409 aa30.99■■■□□ 2.55
TVP23A-206ENST00000572980 PNISRQ8TF01 805 aaKnown RBP30.98■■■□□ 2.55
TVP23A-206ENST00000572980 KRT27Q7Z3Y8 459 aa30.97■■■□□ 2.55
TVP23A-206ENST00000572980 ADAMTS8Q9UP79 889 aa30.97■■■□□ 2.55
TVP23A-206ENST00000572980 NEFMP07197 916 aa30.96■■■□□ 2.55
TVP23A-206ENST00000572980 BRWD3Q6RI45 1802 aa30.95■■■□□ 2.55
TVP23A-206ENST00000572980 DDX54Q8TDD1 881 aaKnown RBP30.95■■■□□ 2.54
TVP23A-206ENST00000572980 PCDH11XQ9BZA7 1347 aa30.93■■■□□ 2.54
TVP23A-206ENST00000572980 PCDH11YQ9BZA8 1340 aa30.93■■■□□ 2.54
TVP23A-206ENST00000572980 PKD1L3Q7Z443 1732 aa30.93■■■□□ 2.54
TVP23A-206ENST00000572980 MARCH10Q8NA82 808 aaPredicted RBP30.9■■■□□ 2.54
TVP23A-206ENST00000572980 PLEKHF1Q96S99 279 aa30.9■■■□□ 2.54
TVP23A-206ENST00000572980 PHACTR3Q96KR7 559 aa30.89■■■□□ 2.54
TVP23A-206ENST00000572980 MAPK8IP3Q9UPT6 1336 aa30.89■■■□□ 2.53
TVP23A-206ENST00000572980 ZNF530Q6P9A1 599 aaPredicted RBP30.88■■■□□ 2.53
TVP23A-206ENST00000572980 IFNL2Q8IZJ0 200 aa30.88■■■□□ 2.53
TVP23A-206ENST00000572980 CYP27B1O15528 508 aa30.88■■■□□ 2.53
TVP23A-206ENST00000572980 MTHFSDQ2M296 383 aaKnown RBP30.88■■■□□ 2.53
TVP23A-206ENST00000572980 GAS2L2Q8NHY3 880 aa30.88■■■□□ 2.53
TVP23A-206ENST00000572980 SHANK3Q9BYB0 1731 aa30.87■■■□□ 2.53
TVP23A-206ENST00000572980 C1orf141Q5JVX7 400 aa30.87■■■□□ 2.53
TVP23A-206ENST00000572980 FAM9BQ8IZU0 186 aa30.87■■■□□ 2.53
TVP23A-206ENST00000572980 RUNDC1Q96C34 613 aa30.86■■■□□ 2.53
TVP23A-206ENST00000572980 PHKG2P15735 406 aa30.85■■■□□ 2.53
TVP23A-206ENST00000572980 FAM182BQ5T319 152 aa30.84■■■□□ 2.53
TVP23A-206ENST00000572980 FAM196AQ6ZSG2 479 aa30.84■■■□□ 2.53
TVP23A-206ENST00000572980 CCDC146Q8IYE0 955 aa30.84■■■□□ 2.53
TVP23A-206ENST00000572980 HSP90AB1P08238 724 aaKnown RBP30.83■■■□□ 2.53
TVP23A-206ENST00000572980 AKAP4Q5JQC9 854 aa30.83■■■□□ 2.53
TVP23A-206ENST00000572980 ILDR2Q71H61 639 aa30.82■■■□□ 2.52
TVP23A-206ENST00000572980 NKX1-1Q15270 411 aaPredicted RBP30.8■■■□□ 2.52
TVP23A-206ENST00000572980 BCL9O00512 1426 aa30.79■■■□□ 2.52
TVP23A-206ENST00000572980 GNAT3A8MTJ3 354 aa30.77■■■□□ 2.52
TVP23A-206ENST00000572980 NFE2L2Q16236 605 aa30.77■■■□□ 2.52
TVP23A-206ENST00000572980 DCAF5Q96JK2 942 aa30.77■■■□□ 2.52
TVP23A-206ENST00000572980 MAP3K5Q99683 1374 aa30.75■■■□□ 2.51
TVP23A-206ENST00000572980 MPRIPQ6WCQ1 1025 aa30.74■■■□□ 2.51
TVP23A-206ENST00000572980 TMPOP42166 694 aaKnown RBP30.73■■■□□ 2.51
TVP23A-206ENST00000572980 RTF1Q92541 710 aaKnown RBP30.72■■■□□ 2.51
TVP23A-206ENST00000572980 APAF1O14727 1248 aa30.71■■■□□ 2.51
TVP23A-206ENST00000572980 HTATSF1O43719 755 aaKnown RBP30.71■■■□□ 2.51
TVP23A-206ENST00000572980 RIPK4P57078 832 aa30.71■■■□□ 2.51
TVP23A-206ENST00000572980 ACSBG1Q96GR2 724 aa30.71■■■□□ 2.51
TVP23A-206ENST00000572980 KAT6BQ8WYB5 2073 aa30.69■■■□□ 2.5
TVP23A-206ENST00000572980 NEUROD2Q15784 382 aa30.69■■■□□ 2.5
TVP23A-206ENST00000572980 ERVV-2B6SEH9 535 aa30.68■■■□□ 2.5
TVP23A-206ENST00000572980 RNMTO43148 476 aaKnown RBP30.68■■■□□ 2.5
TVP23A-206ENST00000572980 PRIM1P49642 420 aaKnown RBP30.68■■■□□ 2.5
TVP23A-206ENST00000572980 SYTL4Q96C24 671 aaPredicted RBP30.68■■■□□ 2.5
TVP23A-206ENST00000572980 RRP7AQ9Y3A4 280 aaKnown RBP30.68■■■□□ 2.5
TVP23A-206ENST00000572980 KDM6AO15550 1401 aaPredicted RBP30.67■■■□□ 2.5
TVP23A-206ENST00000572980 TRIM37O94972 964 aa30.67■■■□□ 2.5
TVP23A-206ENST00000572980 LMOD3Q0VAK6 560 aa30.67■■■□□ 2.5
TVP23A-206ENST00000572980 LGR6Q9HBX8 967 aa30.67■■■□□ 2.5
TVP23A-206ENST00000572980 SBF2Q86WG5 1849 aa30.66■■■□□ 2.5
TVP23A-206ENST00000572980 DOT1LQ8TEK3 1739 aa30.66■■■□□ 2.5
TVP23A-206ENST00000572980 DLG5Q8TDM6 1919 aa30.66■■■□□ 2.5
TVP23A-206ENST00000572980 BCL11BQ9C0K0 894 aaPredicted RBP30.66■■■□□ 2.5
TVP23A-206ENST00000572980 EP400Q96L91 3159 aa30.66■■■□□ 2.5
TVP23A-206ENST00000572980 KCNQ2O43526 872 aa30.65■■■□□ 2.5
TVP23A-206ENST00000572980 IL17REQ8NFR9 667 aa30.65■■■□□ 2.5
TVP23A-206ENST00000572980 SCN11AQ9UI33 1791 aa30.64■■■□□ 2.5
TVP23A-206ENST00000572980 CABP4P57796 275 aa30.64■■■□□ 2.5
TVP23A-206ENST00000572980 NHSQ6T4R5 1651 aa30.63■■■□□ 2.49
TVP23A-206ENST00000572980 MCM10Q7L590 875 aa30.62■■■□□ 2.49
TVP23A-206ENST00000572980 TMOD3Q9NYL9 352 aa30.62■■■□□ 2.49
TVP23A-206ENST00000572980 TOGARAM1Q9Y4F4 1720 aa30.62■■■□□ 2.49
TVP23A-206ENST00000572980 ADAMTS7Q9UKP4 1686 aa30.62■■■□□ 2.49
TVP23A-206ENST00000572980 CCDC125Q86Z20 511 aa30.62■■■□□ 2.49
TVP23A-206ENST00000572980 TEFQ10587 303 aa30.61■■■□□ 2.49
TVP23A-206ENST00000572980 DCTN1Q14203 1278 aa30.61■■■□□ 2.49
TVP23A-206ENST00000572980 CEMIPQ8WUJ3 1361 aa30.6■■■□□ 2.49
TVP23A-206ENST00000572980 SF3B2Q13435 895 aaKnown RBP30.6■■■□□ 2.49
TVP23A-206ENST00000572980 NFATC2IPQ8NCF5 419 aa30.6■■■□□ 2.49
TVP23A-206ENST00000572980 SLC52A2Q9HAB3 445 aa30.6■■■□□ 2.49
TVP23A-206ENST00000572980 VIRMAQ69YN4 1812 aaKnown RBP30.6■■■□□ 2.49
TVP23A-206ENST00000572980 NCBP3Q53F19 620 aaKnown RBP30.59■■■□□ 2.49
TVP23A-206ENST00000572980 ITGB4P16144 1822 aa30.59■■■□□ 2.49
TVP23A-206ENST00000572980 NGEFQ8N5V2 710 aa30.58■■■□□ 2.49
TVP23A-206ENST00000572980 TRIM35Q9UPQ4 493 aa30.58■■■□□ 2.49
TVP23A-206ENST00000572980 PTF1AQ7RTS3 328 aa30.58■■■□□ 2.49
TVP23A-206ENST00000572980 PIGBQ92521 554 aa30.58■■■□□ 2.49
TVP23A-206ENST00000572980 SENP3-EIF4A1A0A087X0R7 540 aa30.55■■■□□ 2.48
TVP23A-206ENST00000572980 MRC1P22897 1456 aa30.55■■■□□ 2.48
TVP23A-206ENST00000572980 CCDC27Q2M243 656 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms