RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 RRS1Q15050 365 aaKnown RBP20.65■□□□□ 0.9
NPLOC4-207ENST00000572346 SLC27A3Q5K4L6 730 aa20.65■□□□□ 0.9
NPLOC4-207ENST00000572346 SYTL4Q96C24 671 aaPredicted RBP20.65■□□□□ 0.9
NPLOC4-207ENST00000572346 GGNBP2Q9H3C7 697 aa20.65■□□□□ 0.9
NPLOC4-207ENST00000572346 PRIM1P49642 420 aaKnown RBP20.64■□□□□ 0.89
NPLOC4-207ENST00000572346 ZCRB1Q8TBF4 217 aaKnown RBP20.64■□□□□ 0.89
NPLOC4-207ENST00000572346 AKT1S1Q96B36 256 aa20.64■□□□□ 0.89
NPLOC4-207ENST00000572346 QSER1Q2KHR3 1735 aa20.64■□□□□ 0.89
NPLOC4-207ENST00000572346 NBPF6Q5VWK0 638 aa20.63■□□□□ 0.89
NPLOC4-207ENST00000572346 NBPF4Q96M43 638 aa20.63■□□□□ 0.89
NPLOC4-207ENST00000572346 ARXQ96QS3 562 aa20.63■□□□□ 0.89
NPLOC4-207ENST00000572346 NSD2O96028 1365 aa20.62■□□□□ 0.89
NPLOC4-207ENST00000572346 LY75O60449 1722 aa20.62■□□□□ 0.89
NPLOC4-207ENST00000572346 KCNQ4P56696 695 aa20.61■□□□□ 0.89
NPLOC4-207ENST00000572346 KIF20BQ96Q89 1820 aa20.61■□□□□ 0.89
NPLOC4-207ENST00000572346 TUBGCP6Q96RT7 1819 aa20.6■□□□□ 0.89
NPLOC4-207ENST00000572346 USHBP1Q8N6Y0 703 aa20.6■□□□□ 0.89
NPLOC4-207ENST00000572346 MAP3K5Q99683 1374 aa20.59■□□□□ 0.89
NPLOC4-207ENST00000572346 PNPLA7Q6ZV29 1317 aa20.59■□□□□ 0.89
NPLOC4-207ENST00000572346 SLC16A10Q8TF71 515 aa20.59■□□□□ 0.89
NPLOC4-207ENST00000572346 SMG6Q86US8 1419 aaKnown RBP20.59■□□□□ 0.89
NPLOC4-207ENST00000572346 CGNL1Q0VF96 1302 aa20.58■□□□□ 0.89
NPLOC4-207ENST00000572346 CDCA8Q53HL2 280 aa20.58■□□□□ 0.89
NPLOC4-207ENST00000572346 COL24A1Q17RW2 1714 aa20.58■□□□□ 0.88
NPLOC4-207ENST00000572346 HSP90AB2PQ58FF8 381 aa20.57■□□□□ 0.88
NPLOC4-207ENST00000572346 RAPGEF4Q8WZA2 1011 aa20.57■□□□□ 0.88
NPLOC4-207ENST00000572346 TFCP2L1Q9NZI6 479 aa20.57■□□□□ 0.88
NPLOC4-207ENST00000572346 INSRP06213 1382 aa20.57■□□□□ 0.88
NPLOC4-207ENST00000572346 CHD4Q14839 1912 aa20.56■□□□□ 0.88
NPLOC4-207ENST00000572346 FLT4P35916 1363 aa20.56■□□□□ 0.88
NPLOC4-207ENST00000572346 CCNL1Q9UK58 526 aaPredicted RBP20.55■□□□□ 0.88
NPLOC4-207ENST00000572346 KIF24Q5T7B8 1368 aa20.55■□□□□ 0.88
NPLOC4-207ENST00000572346 TATP17735 454 aaPredicted RBP20.54■□□□□ 0.88
NPLOC4-207ENST00000572346 CARD14Q9BXL6 1004 aa20.54■□□□□ 0.88
NPLOC4-207ENST00000572346 POLD1P28340 1107 aa20.53■□□□□ 0.88
NPLOC4-207ENST00000572346 ZEB1P37275 1124 aaPredicted RBP20.52■□□□□ 0.88
NPLOC4-207ENST00000572346 ZNF784Q8NCA9 323 aaPredicted RBP20.52■□□□□ 0.88
NPLOC4-207ENST00000572346 NSD3Q9BZ95 1437 aa20.52■□□□□ 0.87
NPLOC4-207ENST00000572346 PCDH11XQ9BZA7 1347 aa20.52■□□□□ 0.87
NPLOC4-207ENST00000572346 PCDH11YQ9BZA8 1340 aa20.52■□□□□ 0.87
NPLOC4-207ENST00000572346 UTRNP46939 3433 aa20.51■□□□□ 0.87
NPLOC4-207ENST00000572346 KLHL34Q8N239 644 aa20.51■□□□□ 0.87
NPLOC4-207ENST00000572346 EMILIN1Q9Y6C2 1016 aa20.51■□□□□ 0.87
NPLOC4-207ENST00000572346 CYP27B1O15528 508 aa20.48■□□□□ 0.87
NPLOC4-207ENST00000572346 C5P01031 1676 aa20.48■□□□□ 0.87
NPLOC4-207ENST00000572346 GPR162Q16538 588 aa20.47■□□□□ 0.87
NPLOC4-207ENST00000572346 COL23A1Q86Y22 540 aaPredicted RBP20.47■□□□□ 0.87
NPLOC4-207ENST00000572346 PKD1L3Q7Z443 1732 aa20.47■□□□□ 0.87
NPLOC4-207ENST00000572346 ANKRD26Q9UPS8 1709 aa20.47■□□□□ 0.87
NPLOC4-207ENST00000572346 TOGARAM1Q9Y4F4 1720 aa20.47■□□□□ 0.87
NPLOC4-207ENST00000572346 ITGB4P16144 1822 aa20.46■□□□□ 0.87
NPLOC4-207ENST00000572346 TAF1LQ8IZX4 1826 aa20.46■□□□□ 0.87
NPLOC4-207ENST00000572346 MSH5O43196 834 aa20.46■□□□□ 0.87
NPLOC4-207ENST00000572346 PALLDQ8WX93 1383 aa20.46■□□□□ 0.87
NPLOC4-207ENST00000572346 NCAPD2Q15021 1401 aa20.45■□□□□ 0.86
NPLOC4-207ENST00000572346 MPRIPQ6WCQ1 1025 aa20.45■□□□□ 0.86
NPLOC4-207ENST00000572346 NLGN2Q8NFZ4 835 aa20.45■□□□□ 0.86
NPLOC4-207ENST00000572346 MAP2P11137 1827 aaKnown RBP20.45■□□□□ 0.86
NPLOC4-207ENST00000572346 PPM1GO15355 546 aaPredicted RBP20.44■□□□□ 0.86
NPLOC4-207ENST00000572346 WASHC2AQ641Q2 1341 aa20.43■□□□□ 0.86
NPLOC4-207ENST00000572346 PELP1Q8IZL8 1130 aaKnown RBP20.42■□□□□ 0.86
NPLOC4-207ENST00000572346 HMGB2P26583 209 aaKnown RBP20.41■□□□□ 0.86
NPLOC4-207ENST00000572346 EIF4G2P78344 907 aaKnown RBP eCLIP20.41■□□□□ 0.862e-15■■■■□ 23.9
NPLOC4-207ENST00000572346 MSL1Q68DK7 614 aa20.41■□□□□ 0.86
NPLOC4-207ENST00000572346 C4BP0C0L5 1744 aa20.4■□□□□ 0.86
NPLOC4-207ENST00000572346 NKX1-1Q15270 411 aaPredicted RBP20.4■□□□□ 0.86
NPLOC4-207ENST00000572346 SMARCC1Q92922 1105 aaPredicted RBP20.4■□□□□ 0.86
NPLOC4-207ENST00000572346 EYA1Q99502 592 aa20.4■□□□□ 0.86
NPLOC4-207ENST00000572346 FLAD1Q8NFF5 587 aa20.39■□□□□ 0.85
NPLOC4-207ENST00000572346 PIGBQ92521 554 aa20.39■□□□□ 0.85
NPLOC4-207ENST00000572346 POLKQ9UBT6 870 aa20.39■□□□□ 0.85
NPLOC4-207ENST00000572346 SPG7Q9UQ90 795 aa20.39■□□□□ 0.85
NPLOC4-207ENST00000572346 POLR3GLQ9BT43 218 aa20.37■□□□□ 0.85
NPLOC4-207ENST00000572346 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.37■□□□□ 0.85
NPLOC4-207ENST00000572346 AMIGO3Q86WK7 504 aa20.36■□□□□ 0.85
NPLOC4-207ENST00000572346 UBR3Q6ZT12 1888 aa20.36■□□□□ 0.85
NPLOC4-207ENST00000572346 YBX3P16989 372 aaKnown RBP eCLIP20.35■□□□□ 0.85
NPLOC4-207ENST00000572346 AK7Q96M32 723 aa20.35■□□□□ 0.85
NPLOC4-207ENST00000572346 GOLGB1Q14789 3259 aaKnown RBP20.34■□□□□ 0.85
NPLOC4-207ENST00000572346 HSPA5P11021 654 aaKnown RBP20.34■□□□□ 0.85
NPLOC4-207ENST00000572346 GRIN3BO60391 1043 aa20.33■□□□□ 0.85
NPLOC4-207ENST00000572346 PHKG2P15735 406 aa20.33■□□□□ 0.85
NPLOC4-207ENST00000572346 TNNT2P45379 298 aaPredicted RBP20.33■□□□□ 0.85
NPLOC4-207ENST00000572346 EIF4A2Q14240 407 aaKnown RBP20.33■□□□□ 0.85
NPLOC4-207ENST00000572346 IFNL2Q8IZJ0 200 aa20.33■□□□□ 0.85
NPLOC4-207ENST00000572346 TMOD3Q9NYL9 352 aa20.33■□□□□ 0.85
NPLOC4-207ENST00000572346 LOC102724428A0A0B4J2F2 783 aa20.32■□□□□ 0.84
NPLOC4-207ENST00000572346 SIK1P57059 783 aa20.32■□□□□ 0.84
NPLOC4-207ENST00000572346 C1QTNF8P60827 252 aa20.32■□□□□ 0.84
NPLOC4-207ENST00000572346 SMIM5Q71RC9 77 aa20.32■□□□□ 0.84
NPLOC4-207ENST00000572346 CD2APQ9Y5K6 639 aa20.32■□□□□ 0.84
NPLOC4-207ENST00000572346 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.31■□□□□ 0.84
NPLOC4-207ENST00000572346 PHF14O94880 888 aa20.31■□□□□ 0.84
NPLOC4-207ENST00000572346 LINC00116Q8NCU8 138 aa20.31■□□□□ 0.84
NPLOC4-207ENST00000572346 ASAP1Q9ULH1 1129 aa20.31■□□□□ 0.84
NPLOC4-207ENST00000572346 SSFA2P28290 1259 aa20.29■□□□□ 0.84
NPLOC4-207ENST00000572346 PLEKHG2Q9H7P9 1386 aa20.29■□□□□ 0.84
NPLOC4-207ENST00000572346 IGSF1Q8N6C5 1336 aa20.28■□□□□ 0.84
NPLOC4-207ENST00000572346 ITPK1Q13572 414 aa20.28■□□□□ 0.84
NPLOC4-207ENST00000572346 PANK3Q9H999 370 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms