RNA–Protein interactions for RNA: ENST00000571880.1

RAB40B-205, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,020 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-205ENST00000571880 NBPF6Q5VWK0 638 aa23.08■■□□□ 1.29
RAB40B-205ENST00000571880 NBPF4Q96M43 638 aa23.08■■□□□ 1.29
RAB40B-205ENST00000571880 TOGARAM1Q9Y4F4 1720 aa23.08■■□□□ 1.28
RAB40B-205ENST00000571880 HSP90AB2PQ58FF8 381 aa23.07■■□□□ 1.28
RAB40B-205ENST00000571880 EMILIN1Q9Y6C2 1016 aa23.07■■□□□ 1.28
RAB40B-205ENST00000571880 CLSPNQ9HAW4 1339 aa23.07■■□□□ 1.28
RAB40B-205ENST00000571880 ITGB4P16144 1822 aa23.06■■□□□ 1.28
RAB40B-205ENST00000571880 FLT4P35916 1363 aa23.06■■□□□ 1.28
RAB40B-205ENST00000571880 SLC15A2Q16348 729 aa23.06■■□□□ 1.28
RAB40B-205ENST00000571880 ATF5Q9Y2D1 282 aaPredicted RBP23.06■■□□□ 1.28
RAB40B-205ENST00000571880 PKD1L3Q7Z443 1732 aa23.05■■□□□ 1.28
RAB40B-205ENST00000571880 KCNQ4P56696 695 aa23.05■■□□□ 1.28
RAB40B-205ENST00000571880 CCER1Q8TC90 406 aaPredicted RBP23.05■■□□□ 1.28
RAB40B-205ENST00000571880 QSER1Q2KHR3 1735 aa23.05■■□□□ 1.28
RAB40B-205ENST00000571880 ZNF827Q17R98 1081 aa23.04■■□□□ 1.28
RAB40B-205ENST00000571880 TIMELESSQ9UNS1 1208 aa23.04■■□□□ 1.28
RAB40B-205ENST00000571880 NSD2O96028 1365 aa23.03■■□□□ 1.28
RAB40B-205ENST00000571880 INSRP06213 1382 aa23.03■■□□□ 1.28
RAB40B-205ENST00000571880 PPM1GO15355 546 aaPredicted RBP23.03■■□□□ 1.28
RAB40B-205ENST00000571880 ZCRB1Q8TBF4 217 aaKnown RBP23.03■■□□□ 1.28
RAB40B-205ENST00000571880 LRRC4BQ9NT99 713 aa23.03■■□□□ 1.28
RAB40B-205ENST00000571880 PRIM1P49642 420 aaKnown RBP23.02■■□□□ 1.28
RAB40B-205ENST00000571880 HSPA5P11021 654 aaKnown RBP23■■□□□ 1.27
RAB40B-205ENST00000571880 RAPGEF4Q8WZA2 1011 aa23■■□□□ 1.27
RAB40B-205ENST00000571880 C5P01031 1676 aa23■■□□□ 1.27
RAB40B-205ENST00000571880 TAF1LQ8IZX4 1826 aa22.99■■□□□ 1.27
RAB40B-205ENST00000571880 PTGER2P43116 358 aa22.98■■□□□ 1.27
RAB40B-205ENST00000571880 TNNT2P45379 298 aaPredicted RBP22.98■■□□□ 1.27
RAB40B-205ENST00000571880 TATP17735 454 aaPredicted RBP22.97■■□□□ 1.27
RAB40B-205ENST00000571880 CGNL1Q0VF96 1302 aa22.97■■□□□ 1.27
RAB40B-205ENST00000571880 EIF4G2P78344 907 aaKnown RBP eCLIP22.95■■□□□ 1.26
RAB40B-205ENST00000571880 KIF24Q5T7B8 1368 aa22.95■■□□□ 1.26
RAB40B-205ENST00000571880 PCDH11XQ9BZA7 1347 aa22.93■■□□□ 1.26
RAB40B-205ENST00000571880 PCDH11YQ9BZA8 1340 aa22.93■■□□□ 1.26
RAB40B-205ENST00000571880 MTFR1LQ9H019 292 aa22.93■■□□□ 1.26
RAB40B-205ENST00000571880 COL24A1Q17RW2 1714 aa22.91■■□□□ 1.26
RAB40B-205ENST00000571880 AKT1S1Q96B36 256 aa22.91■■□□□ 1.26
RAB40B-205ENST00000571880 NCAPD2Q15021 1401 aa22.91■■□□□ 1.26
RAB40B-205ENST00000571880 PNPLA7Q6ZV29 1317 aa22.9■■□□□ 1.26
RAB40B-205ENST00000571880 SLC27A3Q5K4L6 730 aa22.9■■□□□ 1.26
RAB40B-205ENST00000571880 FHDC1Q9C0D6 1143 aaPredicted RBP22.9■■□□□ 1.26
RAB40B-205ENST00000571880 CCNL1Q9UK58 526 aaPredicted RBP22.9■■□□□ 1.26
RAB40B-205ENST00000571880 CYP27B1O15528 508 aa22.89■■□□□ 1.25
RAB40B-205ENST00000571880 SGIP1Q9BQI5 828 aa22.88■■□□□ 1.25
RAB40B-205ENST00000571880 PANK3Q9H999 370 aa22.88■■□□□ 1.25
RAB40B-205ENST00000571880 POLKQ9UBT6 870 aa22.88■■□□□ 1.25
RAB40B-205ENST00000571880 KLHL34Q8N239 644 aa22.87■■□□□ 1.25
RAB40B-205ENST00000571880 TFCP2L1Q9NZI6 479 aa22.87■■□□□ 1.25
RAB40B-205ENST00000571880 WASHC2AQ641Q2 1341 aa22.86■■□□□ 1.25
RAB40B-205ENST00000571880 MPRIPQ6WCQ1 1025 aa22.86■■□□□ 1.25
RAB40B-205ENST00000571880 EYA1Q99502 592 aa22.86■■□□□ 1.25
RAB40B-205ENST00000571880 C4BP0C0L5 1744 aa22.85■■□□□ 1.25
RAB40B-205ENST00000571880 CHD4Q14839 1912 aa22.85■■□□□ 1.25
RAB40B-205ENST00000571880 YY1P25490 414 aa22.85■■□□□ 1.25
RAB40B-205ENST00000571880 PALLDQ8WX93 1383 aa22.85■■□□□ 1.25
RAB40B-205ENST00000571880 UBR3Q6ZT12 1888 aa22.84■■□□□ 1.25
RAB40B-205ENST00000571880 EIF4A2Q14240 407 aaKnown RBP22.84■■□□□ 1.25
RAB40B-205ENST00000571880 ARXQ96QS3 562 aa22.84■■□□□ 1.25
RAB40B-205ENST00000571880 DCAF8L1A6NGE4 600 aa22.83■■□□□ 1.25
RAB40B-205ENST00000571880 MSH5O43196 834 aa22.83■■□□□ 1.25
RAB40B-205ENST00000571880 SYT17Q9BSW7 474 aa22.83■■□□□ 1.25
RAB40B-205ENST00000571880 MSL1Q68DK7 614 aa22.8■■□□□ 1.24
RAB40B-205ENST00000571880 VIRMAQ69YN4 1812 aaKnown RBP22.8■■□□□ 1.24
RAB40B-205ENST00000571880 SPG7Q9UQ90 795 aa22.79■■□□□ 1.24
RAB40B-205ENST00000571880 COL23A1Q86Y22 540 aaPredicted RBP22.77■■□□□ 1.24
RAB40B-205ENST00000571880 SMIM5Q71RC9 77 aa22.76■■□□□ 1.23
RAB40B-205ENST00000571880 MORC1Q86VD1 984 aa22.76■■□□□ 1.23
RAB40B-205ENST00000571880 PIGBQ92521 554 aa22.76■■□□□ 1.23
RAB40B-205ENST00000571880 POLD1P28340 1107 aa22.75■■□□□ 1.23
RAB40B-205ENST00000571880 KIF7Q2M1P5 1343 aa22.75■■□□□ 1.23
RAB40B-205ENST00000571880 IGSF1Q8N6C5 1336 aa22.75■■□□□ 1.23
RAB40B-205ENST00000571880 PHKG2P15735 406 aa22.74■■□□□ 1.23
RAB40B-205ENST00000571880 AMIGO3Q86WK7 504 aa22.73■■□□□ 1.23
RAB40B-205ENST00000571880 AEBP1Q8IUX7 1158 aa22.73■■□□□ 1.23
RAB40B-205ENST00000571880 PELP1Q8IZL8 1130 aaKnown RBP22.73■■□□□ 1.23
RAB40B-205ENST00000571880 SLC16A10Q8TF71 515 aa22.73■■□□□ 1.23
RAB40B-205ENST00000571880 TMOD3Q9NYL9 352 aa22.73■■□□□ 1.23
RAB40B-205ENST00000571880 PHF14O94880 888 aa22.72■■□□□ 1.23
RAB40B-205ENST00000571880 NLGN2Q8NFZ4 835 aa22.72■■□□□ 1.23
RAB40B-205ENST00000571880 MAP3K5Q99683 1374 aa22.72■■□□□ 1.23
RAB40B-205ENST00000571880 NKX1-1Q15270 411 aaPredicted RBP22.71■■□□□ 1.23
RAB40B-205ENST00000571880 IFNL2Q8IZJ0 200 aa22.71■■□□□ 1.23
RAB40B-205ENST00000571880 KNSTRNQ9Y448 316 aa22.71■■□□□ 1.23
RAB40B-205ENST00000571880 COL5A3P25940 1745 aaPredicted RBP22.71■■□□□ 1.23
RAB40B-205ENST00000571880 SMARCC1Q92922 1105 aaPredicted RBP22.7■■□□□ 1.22
RAB40B-205ENST00000571880 AK7Q96M32 723 aa22.7■■□□□ 1.22
RAB40B-205ENST00000571880 ASAP1Q9ULH1 1129 aa22.7■■□□□ 1.22
RAB40B-205ENST00000571880 SCN11AQ9UI33 1791 aa22.7■■□□□ 1.22
RAB40B-205ENST00000571880 KDM6AO15550 1401 aaPredicted RBP22.69■■□□□ 1.22
RAB40B-205ENST00000571880 CNGB1Q14028 1251 aaPredicted RBP22.69■■□□□ 1.22
RAB40B-205ENST00000571880 LINC00116Q8NCU8 138 aa22.68■■□□□ 1.22
RAB40B-205ENST00000571880 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.68■■□□□ 1.22
RAB40B-205ENST00000571880 LOC102724428A0A0B4J2F2 783 aa22.67■■□□□ 1.22
RAB40B-205ENST00000571880 SIK1P57059 783 aa22.67■■□□□ 1.22
RAB40B-205ENST00000571880 ZNF530Q6P9A1 599 aaPredicted RBP22.67■■□□□ 1.22
RAB40B-205ENST00000571880 ITPK1Q13572 414 aa22.66■■□□□ 1.22
RAB40B-205ENST00000571880 GPR162Q16538 588 aa22.66■■□□□ 1.22
RAB40B-205ENST00000571880 C4AP0C0L4 1744 aa22.65■■□□□ 1.22
RAB40B-205ENST00000571880 AMER1Q5JTC6 1135 aaPredicted RBP22.65■■□□□ 1.22
RAB40B-205ENST00000571880 MYH14Q7Z406 1995 aaKnown RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms