RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 PRIM1P49642 420 aaKnown RBP21.69■■□□□ 1.06
TSR1-202ENST00000571806 AKT1S1Q96B36 256 aa21.69■■□□□ 1.06
TSR1-202ENST00000571806 FBLN1P23142 703 aa21.68■■□□□ 1.06
TSR1-202ENST00000571806 RRS1Q15050 365 aaKnown RBP21.68■■□□□ 1.06
TSR1-202ENST00000571806 ZNF827Q17R98 1081 aa21.68■■□□□ 1.06
TSR1-202ENST00000571806 GGNBP2Q9H3C7 697 aa21.68■■□□□ 1.06
TSR1-202ENST00000571806 TIMELESSQ9UNS1 1208 aa21.68■■□□□ 1.06
TSR1-202ENST00000571806 MAP3K5Q99683 1374 aa21.68■■□□□ 1.06
TSR1-202ENST00000571806 QSER1Q2KHR3 1735 aa21.68■■□□□ 1.06
TSR1-202ENST00000571806 RAPGEF4Q8WZA2 1011 aa21.67■■□□□ 1.06
TSR1-202ENST00000571806 NBPF6Q5VWK0 638 aa21.66■■□□□ 1.06
TSR1-202ENST00000571806 NBPF4Q96M43 638 aa21.66■■□□□ 1.06
TSR1-202ENST00000571806 RGPD2P0DJD1 1756 aa21.66■■□□□ 1.06
TSR1-202ENST00000571806 INSRP06213 1382 aa21.65■■□□□ 1.06
TSR1-202ENST00000571806 TFCP2L1Q9NZI6 479 aa21.65■■□□□ 1.06
TSR1-202ENST00000571806 DOT1LQ8TEK3 1739 aa21.65■■□□□ 1.06
TSR1-202ENST00000571806 MEGF6O75095 1541 aa21.65■■□□□ 1.06
TSR1-202ENST00000571806 POLD1P28340 1107 aa21.64■■□□□ 1.05
TSR1-202ENST00000571806 LY75O60449 1722 aa21.63■■□□□ 1.05
TSR1-202ENST00000571806 SHANK3Q9BYB0 1731 aa21.63■■□□□ 1.05
TSR1-202ENST00000571806 FLT4P35916 1363 aa21.63■■□□□ 1.05
TSR1-202ENST00000571806 TATP17735 454 aaPredicted RBP21.63■■□□□ 1.05
TSR1-202ENST00000571806 KIF20BQ96Q89 1820 aa21.63■■□□□ 1.05
TSR1-202ENST00000571806 NSD2O96028 1365 aa21.62■■□□□ 1.05
TSR1-202ENST00000571806 PNPLA7Q6ZV29 1317 aa21.61■■□□□ 1.05
TSR1-202ENST00000571806 PCDH11XQ9BZA7 1347 aa21.61■■□□□ 1.05
TSR1-202ENST00000571806 PCDH11YQ9BZA8 1340 aa21.61■■□□□ 1.05
TSR1-202ENST00000571806 CCNL1Q9UK58 526 aaPredicted RBP21.61■■□□□ 1.05
TSR1-202ENST00000571806 HSP90AB2PQ58FF8 381 aa21.6■■□□□ 1.05
TSR1-202ENST00000571806 COL24A1Q17RW2 1714 aa21.59■■□□□ 1.05
TSR1-202ENST00000571806 CLSPNQ9HAW4 1339 aa21.58■■□□□ 1.05
TSR1-202ENST00000571806 USHBP1Q8N6Y0 703 aa21.58■■□□□ 1.05
TSR1-202ENST00000571806 UTRNP46939 3433 aa21.56■■□□□ 1.04
TSR1-202ENST00000571806 KCNQ4P56696 695 aa21.56■■□□□ 1.04
TSR1-202ENST00000571806 CARD14Q9BXL6 1004 aa21.56■■□□□ 1.04
TSR1-202ENST00000571806 CHD4Q14839 1912 aa21.56■■□□□ 1.04
TSR1-202ENST00000571806 NSD3Q9BZ95 1437 aa21.55■■□□□ 1.04
TSR1-202ENST00000571806 GPR162Q16538 588 aa21.54■■□□□ 1.04
TSR1-202ENST00000571806 ZNF784Q8NCA9 323 aaPredicted RBP21.54■■□□□ 1.04
TSR1-202ENST00000571806 TUBGCP6Q96RT7 1819 aa21.54■■□□□ 1.04
TSR1-202ENST00000571806 FLAD1Q8NFF5 587 aa21.53■■□□□ 1.04
TSR1-202ENST00000571806 SMARCC1Q92922 1105 aaPredicted RBP21.52■■□□□ 1.04
TSR1-202ENST00000571806 WASHC2AQ641Q2 1341 aa21.52■■□□□ 1.03
TSR1-202ENST00000571806 SPG7Q9UQ90 795 aa21.51■■□□□ 1.03
TSR1-202ENST00000571806 EMILIN1Q9Y6C2 1016 aa21.51■■□□□ 1.03
TSR1-202ENST00000571806 NCAPD2Q15021 1401 aa21.5■■□□□ 1.03
TSR1-202ENST00000571806 CYP27B1O15528 508 aa21.5■■□□□ 1.03
TSR1-202ENST00000571806 MSH5O43196 834 aa21.5■■□□□ 1.03
TSR1-202ENST00000571806 MPRIPQ6WCQ1 1025 aa21.5■■□□□ 1.03
TSR1-202ENST00000571806 KLHL34Q8N239 644 aa21.5■■□□□ 1.03
TSR1-202ENST00000571806 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.5■■□□□ 1.033e-6■□□□□ 10.7
TSR1-202ENST00000571806 C5P01031 1676 aa21.5■■□□□ 1.03
TSR1-202ENST00000571806 PALLDQ8WX93 1383 aa21.49■■□□□ 1.03
TSR1-202ENST00000571806 PPM1GO15355 546 aaPredicted RBP21.49■■□□□ 1.03
TSR1-202ENST00000571806 NKX1-1Q15270 411 aaPredicted RBP21.49■■□□□ 1.03
TSR1-202ENST00000571806 COL23A1Q86Y22 540 aaPredicted RBP21.49■■□□□ 1.03
TSR1-202ENST00000571806 PKD1L3Q7Z443 1732 aa21.49■■□□□ 1.03
TSR1-202ENST00000571806 ANKRD26Q9UPS8 1709 aa21.49■■□□□ 1.03
TSR1-202ENST00000571806 PLEKHG2Q9H7P9 1386 aa21.46■■□□□ 1.03
TSR1-202ENST00000571806 MAP2P11137 1827 aaKnown RBP21.45■■□□□ 1.03
TSR1-202ENST00000571806 ITGB4P16144 1822 aa21.44■■□□□ 1.02
TSR1-202ENST00000571806 TAF1LQ8IZX4 1826 aa21.44■■□□□ 1.02
TSR1-202ENST00000571806 GRIN3BO60391 1043 aa21.44■■□□□ 1.02
TSR1-202ENST00000571806 EYA1Q99502 592 aa21.44■■□□□ 1.02
TSR1-202ENST00000571806 POLKQ9UBT6 870 aa21.44■■□□□ 1.02
TSR1-202ENST00000571806 PELP1Q8IZL8 1130 aaKnown RBP21.43■■□□□ 1.02
TSR1-202ENST00000571806 PIGBQ92521 554 aa21.43■■□□□ 1.02
TSR1-202ENST00000571806 AK7Q96M32 723 aa21.43■■□□□ 1.02
TSR1-202ENST00000571806 IFNL2Q8IZJ0 200 aa21.42■■□□□ 1.02
TSR1-202ENST00000571806 NLGN2Q8NFZ4 835 aa21.42■■□□□ 1.02
TSR1-202ENST00000571806 CD2APQ9Y5K6 639 aa21.42■■□□□ 1.02
TSR1-202ENST00000571806 TOGARAM1Q9Y4F4 1720 aa21.41■■□□□ 1.02
TSR1-202ENST00000571806 C4BP0C0L5 1744 aa21.41■■□□□ 1.02
TSR1-202ENST00000571806 EIF4G2P78344 907 aaKnown RBP eCLIP21.4■■□□□ 1.02
TSR1-202ENST00000571806 TMOD3Q9NYL9 352 aa21.4■■□□□ 1.02
TSR1-202ENST00000571806 PCGF6Q9BYE7 350 aa21.39■■□□□ 1.01
TSR1-202ENST00000571806 LOC102724428A0A0B4J2F2 783 aa21.38■■□□□ 1.01
TSR1-202ENST00000571806 PHKG2P15735 406 aa21.38■■□□□ 1.01
TSR1-202ENST00000571806 SIK1P57059 783 aa21.38■■□□□ 1.01
TSR1-202ENST00000571806 MSL1Q68DK7 614 aa21.38■■□□□ 1.01
TSR1-202ENST00000571806 POLR3GLQ9BT43 218 aa21.38■■□□□ 1.01
TSR1-202ENST00000571806 SSFA2P28290 1259 aa21.37■■□□□ 1.01
TSR1-202ENST00000571806 GOLGB1Q14789 3259 aaKnown RBP21.37■■□□□ 1.01
TSR1-202ENST00000571806 EIF4A2Q14240 407 aaKnown RBP21.36■■□□□ 1.01
TSR1-202ENST00000571806 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.35■■□□□ 1.01
TSR1-202ENST00000571806 HSP90AB1P08238 724 aaKnown RBP21.35■■□□□ 1.01
TSR1-202ENST00000571806 C1QTNF8P60827 252 aa21.35■■□□□ 1.01
TSR1-202ENST00000571806 UBR3Q6ZT12 1888 aa21.35■■□□□ 1.01
TSR1-202ENST00000571806 YBX3P16989 372 aaKnown RBP eCLIP21.34■■□□□ 1.01
TSR1-202ENST00000571806 TNNT2P45379 298 aaPredicted RBP21.34■■□□□ 1.01
TSR1-202ENST00000571806 ERVV-2B6SEH9 535 aa21.33■■□□□ 1.01
TSR1-202ENST00000571806 ATP6V1AP38606 617 aa21.33■■□□□ 1.01
TSR1-202ENST00000571806 PANK3Q9H999 370 aa21.33■■□□□ 1.01
TSR1-202ENST00000571806 IGSF1Q8N6C5 1336 aa21.32■■□□□ 1
TSR1-202ENST00000571806 PHF14O94880 888 aa21.32■■□□□ 1
TSR1-202ENST00000571806 ASAP1Q9ULH1 1129 aa21.32■■□□□ 1
TSR1-202ENST00000571806 GIGYF1O75420 1035 aaPredicted RBP21.31■■□□□ 1
TSR1-202ENST00000571806 AMOTQ4VCS5 1084 aa21.31■■□□□ 1
TSR1-202ENST00000571806 LINC00116Q8NCU8 138 aa21.31■■□□□ 1
TSR1-202ENST00000571806 DCAF5Q96JK2 942 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms