RNA–Protein interactions for RNA: ENST00000571691.5

ACTG1-203, Transcript of actin gamma 1, humanhuman

TSL 3

Gene ACTG1, Length 761 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-203ENST00000571691 RTL1A6NKG5 1358 aa18.43■□□□□ 0.54
ACTG1-203ENST00000571691 LY75O60449 1722 aa18.43■□□□□ 0.54
ACTG1-203ENST00000571691 POLD1P28340 1107 aa18.43■□□□□ 0.54
ACTG1-203ENST00000571691 TMF1P82094 1093 aa18.43■□□□□ 0.54
ACTG1-203ENST00000571691 ZNF784Q8NCA9 323 aaPredicted RBP18.43■□□□□ 0.54
ACTG1-203ENST00000571691 TFCP2L1Q9NZI6 479 aa18.43■□□□□ 0.54
ACTG1-203ENST00000571691 COL24A1Q17RW2 1714 aa18.43■□□□□ 0.54
ACTG1-203ENST00000571691 FYB1O15117 783 aa18.42■□□□□ 0.54
ACTG1-203ENST00000571691 HMGB2P26583 209 aaKnown RBP18.42■□□□□ 0.54
ACTG1-203ENST00000571691 DOT1LQ8TEK3 1739 aa18.42■□□□□ 0.54
ACTG1-203ENST00000571691 SHANK3Q9BYB0 1731 aa18.41■□□□□ 0.54
ACTG1-203ENST00000571691 PNPLA7Q6ZV29 1317 aa18.41■□□□□ 0.54
ACTG1-203ENST00000571691 NBPF6Q5VWK0 638 aa18.4■□□□□ 0.54
ACTG1-203ENST00000571691 NBPF4Q96M43 638 aa18.4■□□□□ 0.54
ACTG1-203ENST00000571691 RRS1Q15050 365 aaKnown RBP18.39■□□□□ 0.53
ACTG1-203ENST00000571691 CDCA8Q53HL2 280 aa18.39■□□□□ 0.53
ACTG1-203ENST00000571691 RAPGEF4Q8WZA2 1011 aa18.39■□□□□ 0.53
ACTG1-203ENST00000571691 GGNBP2Q9H3C7 697 aa18.39■□□□□ 0.53
ACTG1-203ENST00000571691 TUBGCP6Q96RT7 1819 aa18.39■□□□□ 0.53
ACTG1-203ENST00000571691 NSD2O96028 1365 aa18.39■□□□□ 0.53
ACTG1-203ENST00000571691 SMG6Q86US8 1419 aaKnown RBP18.39■□□□□ 0.53
ACTG1-203ENST00000571691 MEGF6O75095 1541 aa18.39■□□□□ 0.53
ACTG1-203ENST00000571691 KCNQ4P56696 695 aa18.38■□□□□ 0.53
ACTG1-203ENST00000571691 GPR162Q16538 588 aa18.38■□□□□ 0.53
ACTG1-203ENST00000571691 CCNL1Q9UK58 526 aaPredicted RBP18.38■□□□□ 0.53
ACTG1-203ENST00000571691 USP47Q96K76 1375 aa18.38■□□□□ 0.53
ACTG1-203ENST00000571691 INSRP06213 1382 aa18.36■□□□□ 0.53
ACTG1-203ENST00000571691 TATP17735 454 aaPredicted RBP18.36■□□□□ 0.53
ACTG1-203ENST00000571691 KIF24Q5T7B8 1368 aa18.36■□□□□ 0.53
ACTG1-203ENST00000571691 KIF20BQ96Q89 1820 aa18.35■□□□□ 0.53
ACTG1-203ENST00000571691 HSP90AB2PQ58FF8 381 aa18.34■□□□□ 0.53
ACTG1-203ENST00000571691 KLHL34Q8N239 644 aa18.34■□□□□ 0.53
ACTG1-203ENST00000571691 USHBP1Q8N6Y0 703 aa18.34■□□□□ 0.53
ACTG1-203ENST00000571691 FLT4P35916 1363 aa18.33■□□□□ 0.53
ACTG1-203ENST00000571691 PCDH11XQ9BZA7 1347 aa18.33■□□□□ 0.53
ACTG1-203ENST00000571691 PCDH11YQ9BZA8 1340 aa18.33■□□□□ 0.53
ACTG1-203ENST00000571691 MSH5O43196 834 aa18.31■□□□□ 0.52
ACTG1-203ENST00000571691 COL23A1Q86Y22 540 aaPredicted RBP18.31■□□□□ 0.52
ACTG1-203ENST00000571691 FLAD1Q8NFF5 587 aa18.31■□□□□ 0.52
ACTG1-203ENST00000571691 TAF1LQ8IZX4 1826 aa18.3■□□□□ 0.52
ACTG1-203ENST00000571691 C5P01031 1676 aa18.29■□□□□ 0.52
ACTG1-203ENST00000571691 PELP1Q8IZL8 1130 aaKnown RBP18.29■□□□□ 0.52
ACTG1-203ENST00000571691 ITGB4P16144 1822 aa18.28■□□□□ 0.52
ACTG1-203ENST00000571691 GOLGB1Q14789 3259 aaKnown RBP18.28■□□□□ 0.52
ACTG1-203ENST00000571691 GRIN3BO60391 1043 aa18.28■□□□□ 0.52
ACTG1-203ENST00000571691 C1QTNF8P60827 252 aa18.28■□□□□ 0.52
ACTG1-203ENST00000571691 TRIM26Q12899 539 aaPredicted RBP18.28■□□□□ 0.52
ACTG1-203ENST00000571691 MPRIPQ6WCQ1 1025 aa18.28■□□□□ 0.52
ACTG1-203ENST00000571691 NLGN2Q8NFZ4 835 aa18.28■□□□□ 0.52
ACTG1-203ENST00000571691 SMARCC1Q92922 1105 aaPredicted RBP18.28■□□□□ 0.52
ACTG1-203ENST00000571691 CARD14Q9BXL6 1004 aa18.28■□□□□ 0.52
ACTG1-203ENST00000571691 CYP27B1O15528 508 aa18.27■□□□□ 0.52
ACTG1-203ENST00000571691 PALLDQ8WX93 1383 aa18.27■□□□□ 0.51
ACTG1-203ENST00000571691 MAP2P11137 1827 aaKnown RBP18.26■□□□□ 0.51
ACTG1-203ENST00000571691 TIMELESSQ9UNS1 1208 aa18.26■□□□□ 0.51
ACTG1-203ENST00000571691 NKX1-1Q15270 411 aaPredicted RBP18.25■□□□□ 0.51
ACTG1-203ENST00000571691 SPG7Q9UQ90 795 aa18.25■□□□□ 0.51
ACTG1-203ENST00000571691 EMILIN1Q9Y6C2 1016 aa18.25■□□□□ 0.51
ACTG1-203ENST00000571691 PKD1L3Q7Z443 1732 aa18.25■□□□□ 0.51
ACTG1-203ENST00000571691 CD2APQ9Y5K6 639 aa18.24■□□□□ 0.51
ACTG1-203ENST00000571691 WASHC2AQ641Q2 1341 aa18.23■□□□□ 0.51
ACTG1-203ENST00000571691 NSD3Q9BZ95 1437 aa18.23■□□□□ 0.51
ACTG1-203ENST00000571691 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.23■□□□□ 0.51
ACTG1-203ENST00000571691 NCAPD2Q15021 1401 aa18.23■□□□□ 0.51
ACTG1-203ENST00000571691 PPM1GO15355 546 aaPredicted RBP18.22■□□□□ 0.51
ACTG1-203ENST00000571691 MSL1Q68DK7 614 aa18.22■□□□□ 0.51
ACTG1-203ENST00000571691 C4BP0C0L5 1744 aa18.22■□□□□ 0.51
ACTG1-203ENST00000571691 ANKRD26Q9UPS8 1709 aa18.22■□□□□ 0.51
ACTG1-203ENST00000571691 TOGARAM1Q9Y4F4 1720 aa18.22■□□□□ 0.51
ACTG1-203ENST00000571691 SENP3-EIF4A1A0A087X0R7 540 aa18.21■□□□□ 0.51
ACTG1-203ENST00000571691 GIGYF1O75420 1035 aaPredicted RBP18.21■□□□□ 0.51
ACTG1-203ENST00000571691 YBX3P16989 372 aaKnown RBP eCLIP18.21■□□□□ 0.512e-29■□□□□ 9.4
ACTG1-203ENST00000571691 PIGBQ92521 554 aa18.21■□□□□ 0.51
ACTG1-203ENST00000571691 AK7Q96M32 723 aa18.21■□□□□ 0.51
ACTG1-203ENST00000571691 UBR3Q6ZT12 1888 aa18.2■□□□□ 0.5
ACTG1-203ENST00000571691 EYA1Q99502 592 aa18.19■□□□□ 0.5
ACTG1-203ENST00000571691 IFNL2Q8IZJ0 200 aa18.18■□□□□ 0.5
ACTG1-203ENST00000571691 POLKQ9UBT6 870 aa18.18■□□□□ 0.5
ACTG1-203ENST00000571691 LOC102724428A0A0B4J2F2 783 aa18.17■□□□□ 0.5
ACTG1-203ENST00000571691 SIK1P57059 783 aa18.17■□□□□ 0.5
ACTG1-203ENST00000571691 TMOD3Q9NYL9 352 aa18.17■□□□□ 0.5
ACTG1-203ENST00000571691 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.16■□□□□ 0.5
ACTG1-203ENST00000571691 SSFA2P28290 1259 aa18.16■□□□□ 0.5
ACTG1-203ENST00000571691 PLEKHG2Q9H7P9 1386 aa18.16■□□□□ 0.5
ACTG1-203ENST00000571691 PHKG2P15735 406 aa18.15■□□□□ 0.5
ACTG1-203ENST00000571691 CLSPNQ9HAW4 1339 aa18.15■□□□□ 0.5
ACTG1-203ENST00000571691 PHF14O94880 888 aa18.14■□□□□ 0.49
ACTG1-203ENST00000571691 ATP6V1AP38606 617 aa18.13■□□□□ 0.49
ACTG1-203ENST00000571691 AMIGO3Q86WK7 504 aa18.13■□□□□ 0.49
ACTG1-203ENST00000571691 LINC00116Q8NCU8 138 aa18.13■□□□□ 0.49
ACTG1-203ENST00000571691 ASAP1Q9ULH1 1129 aa18.13■□□□□ 0.49
ACTG1-203ENST00000571691 EIF4A2Q14240 407 aaKnown RBP18.11■□□□□ 0.49
ACTG1-203ENST00000571691 ERVV-2B6SEH9 535 aa18.1■□□□□ 0.49
ACTG1-203ENST00000571691 GNPATO15228 680 aa18.1■□□□□ 0.49
ACTG1-203ENST00000571691 ITPK1Q13572 414 aa18.1■□□□□ 0.49
ACTG1-203ENST00000571691 POLR3GLQ9BT43 218 aa18.1■□□□□ 0.49
ACTG1-203ENST00000571691 ATG3Q9NT62 314 aa18.1■□□□□ 0.49
ACTG1-203ENST00000571691 IGSF1Q8N6C5 1336 aa18.09■□□□□ 0.49
ACTG1-203ENST00000571691 HSP90AB1P08238 724 aaKnown RBP18.09■□□□□ 0.49
ACTG1-203ENST00000571691 TNNT2P45379 298 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms