RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 LY75O60449 1722 aa20.88■□□□□ 0.93
RAB40B-203ENST00000570676 HSP90AB2PQ58FF8 381 aa20.88■□□□□ 0.93
RAB40B-203ENST00000570676 NBPF6Q5VWK0 638 aa20.88■□□□□ 0.93
RAB40B-203ENST00000570676 NBPF4Q96M43 638 aa20.88■□□□□ 0.93
RAB40B-203ENST00000570676 EMILIN1Q9Y6C2 1016 aa20.88■□□□□ 0.93
RAB40B-203ENST00000570676 POLR3GLQ9BT43 218 aa20.87■□□□□ 0.93
RAB40B-203ENST00000570676 TXNRD1Q16881 649 aa20.86■□□□□ 0.93
RAB40B-203ENST00000570676 USHBP1Q8N6Y0 703 aa20.86■□□□□ 0.93
RAB40B-203ENST00000570676 TOGARAM1Q9Y4F4 1720 aa20.85■□□□□ 0.93
RAB40B-203ENST00000570676 DDX54Q8TDD1 881 aaKnown RBP20.84■□□□□ 0.93
RAB40B-203ENST00000570676 NSD2O96028 1365 aa20.84■□□□□ 0.93
RAB40B-203ENST00000570676 QSER1Q2KHR3 1735 aa20.83■□□□□ 0.92
RAB40B-203ENST00000570676 TUBGCP6Q96RT7 1819 aa20.83■□□□□ 0.92
RAB40B-203ENST00000570676 ZCRB1Q8TBF4 217 aaKnown RBP20.82■□□□□ 0.92
RAB40B-203ENST00000570676 ITGB4P16144 1822 aa20.8■□□□□ 0.92
RAB40B-203ENST00000570676 WASHC2AQ641Q2 1341 aa20.79■□□□□ 0.92
RAB40B-203ENST00000570676 RAPGEF4Q8WZA2 1011 aa20.79■□□□□ 0.92
RAB40B-203ENST00000570676 PANK3Q9H999 370 aa20.79■□□□□ 0.92
RAB40B-203ENST00000570676 PDGFDQ9GZP0 370 aaPredicted RBP20.78■□□□□ 0.92
RAB40B-203ENST00000570676 POLKQ9UBT6 870 aa20.78■□□□□ 0.92
RAB40B-203ENST00000570676 TATP17735 454 aaPredicted RBP20.77■□□□□ 0.92
RAB40B-203ENST00000570676 SLC15A2Q16348 729 aa20.77■□□□□ 0.92
RAB40B-203ENST00000570676 PCDH11XQ9BZA7 1347 aa20.77■□□□□ 0.91
RAB40B-203ENST00000570676 PCDH11YQ9BZA8 1340 aa20.77■□□□□ 0.91
RAB40B-203ENST00000570676 PPM1GO15355 546 aaPredicted RBP20.76■□□□□ 0.91
RAB40B-203ENST00000570676 STK32BQ9NY57 414 aa20.76■□□□□ 0.91
RAB40B-203ENST00000570676 SPON1Q9HCB6 807 aa20.75■□□□□ 0.91
RAB40B-203ENST00000570676 LRRC4BQ9NT99 713 aa20.75■□□□□ 0.91
RAB40B-203ENST00000570676 KIF7Q2M1P5 1343 aa20.75■□□□□ 0.91
RAB40B-203ENST00000570676 C5P01031 1676 aa20.74■□□□□ 0.91
RAB40B-203ENST00000570676 PRIM1P49642 420 aaKnown RBP20.74■□□□□ 0.91
RAB40B-203ENST00000570676 TAF1LQ8IZX4 1826 aa20.74■□□□□ 0.91
RAB40B-203ENST00000570676 COL24A1Q17RW2 1714 aa20.73■□□□□ 0.91
RAB40B-203ENST00000570676 TNNT2P45379 298 aaPredicted RBP20.73■□□□□ 0.91
RAB40B-203ENST00000570676 ZNF827Q17R98 1081 aa20.73■□□□□ 0.91
RAB40B-203ENST00000570676 SYTL4Q96C24 671 aaPredicted RBP20.73■□□□□ 0.91
RAB40B-203ENST00000570676 CYP27B1O15528 508 aa20.72■□□□□ 0.91
RAB40B-203ENST00000570676 EYA1Q99502 592 aa20.72■□□□□ 0.91
RAB40B-203ENST00000570676 EIF4A2Q14240 407 aaKnown RBP20.71■□□□□ 0.91
RAB40B-203ENST00000570676 SLC27A3Q5K4L6 730 aa20.7■□□□□ 0.9
RAB40B-203ENST00000570676 ZBTB7AO95365 584 aa20.69■□□□□ 0.9
RAB40B-203ENST00000570676 PLEKHG2Q9H7P9 1386 aa20.69■□□□□ 0.9
RAB40B-203ENST00000570676 PTGER2P43116 358 aa20.68■□□□□ 0.9
RAB40B-203ENST00000570676 AKT1S1Q96B36 256 aa20.68■□□□□ 0.9
RAB40B-203ENST00000570676 IGSF1Q8N6C5 1336 aa20.68■□□□□ 0.9
RAB40B-203ENST00000570676 ZNF316A6NFI3 1004 aaPredicted RBP20.67■□□□□ 0.9
RAB40B-203ENST00000570676 KCNQ4P56696 695 aa20.66■□□□□ 0.9
RAB40B-203ENST00000570676 AMER1Q5JTC6 1135 aaPredicted RBP20.66■□□□□ 0.9
RAB40B-203ENST00000570676 MORC1Q86VD1 984 aa20.65■□□□□ 0.9
RAB40B-203ENST00000570676 SGIP1Q9BQI5 828 aa20.65■□□□□ 0.9
RAB40B-203ENST00000570676 MTFR1LQ9H019 292 aa20.65■□□□□ 0.9
RAB40B-203ENST00000570676 PPP1R1BQ9UD71 204 aaPredicted RBP20.65■□□□□ 0.9
RAB40B-203ENST00000570676 KNSTRNQ9Y448 316 aa20.65■□□□□ 0.9
RAB40B-203ENST00000570676 NKX1-1Q15270 411 aaPredicted RBP20.64■□□□□ 0.89
RAB40B-203ENST00000570676 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.64■□□□□ 0.89
RAB40B-203ENST00000570676 PALLDQ8WX93 1383 aa20.63■□□□□ 0.89
RAB40B-203ENST00000570676 PNPLA7Q6ZV29 1317 aa20.63■□□□□ 0.89
RAB40B-203ENST00000570676 CCNL1Q9UK58 526 aaPredicted RBP20.63■□□□□ 0.89
RAB40B-203ENST00000570676 SPG7Q9UQ90 795 aa20.63■□□□□ 0.89
RAB40B-203ENST00000570676 ATF5Q9Y2D1 282 aaPredicted RBP20.63■□□□□ 0.89
RAB40B-203ENST00000570676 C4BP0C0L5 1744 aa20.62■□□□□ 0.89
RAB40B-203ENST00000570676 UBR3Q6ZT12 1888 aa20.6■□□□□ 0.89
RAB40B-203ENST00000570676 PER1O15534 1290 aaPredicted RBP20.6■□□□□ 0.89
RAB40B-203ENST00000570676 PHKG2P15735 406 aa20.6■□□□□ 0.89
RAB40B-203ENST00000570676 MPRIPQ6WCQ1 1025 aa20.6■□□□□ 0.89
RAB40B-203ENST00000570676 KDRP35968 1356 aa20.59■□□□□ 0.89
RAB40B-203ENST00000570676 VIRMAQ69YN4 1812 aaKnown RBP20.57■□□□□ 0.88
RAB40B-203ENST00000570676 IFNL2Q8IZJ0 200 aa20.57■□□□□ 0.88
RAB40B-203ENST00000570676 PIGBQ92521 554 aa20.57■□□□□ 0.88
RAB40B-203ENST00000570676 ZNF831Q5JPB2 1677 aa20.57■□□□□ 0.88
RAB40B-203ENST00000570676 KDM6AO15550 1401 aaPredicted RBP20.56■□□□□ 0.88
RAB40B-203ENST00000570676 AEBP1Q8IUX7 1158 aa20.56■□□□□ 0.88
RAB40B-203ENST00000570676 TFCP2L1Q9NZI6 479 aa20.56■□□□□ 0.88
RAB40B-203ENST00000570676 SCN11AQ9UI33 1791 aa20.56■□□□□ 0.88
RAB40B-203ENST00000570676 SLC16A10Q8TF71 515 aa20.55■□□□□ 0.88
RAB40B-203ENST00000570676 NPC1L1Q9UHC9 1359 aa20.55■□□□□ 0.88
RAB40B-203ENST00000570676 COL5A3P25940 1745 aaPredicted RBP20.54■□□□□ 0.88
RAB40B-203ENST00000570676 IL13P35225 146 aa20.54■□□□□ 0.88
RAB40B-203ENST00000570676 SMARCC1Q92922 1105 aaPredicted RBP20.54■□□□□ 0.88
RAB40B-203ENST00000570676 MAP3K5Q99683 1374 aa20.54■□□□□ 0.88
RAB40B-203ENST00000570676 COL3A1P02461 1466 aaPredicted RBP20.54■□□□□ 0.88
RAB40B-203ENST00000570676 FHDC1Q9C0D6 1143 aaPredicted RBP20.53■□□□□ 0.88
RAB40B-203ENST00000570676 TMOD3Q9NYL9 352 aa20.52■□□□□ 0.88
RAB40B-203ENST00000570676 CC2D1BQ5T0F9 858 aaKnown RBP20.51■□□□□ 0.87
RAB40B-203ENST00000570676 ARXQ96QS3 562 aa20.51■□□□□ 0.87
RAB40B-203ENST00000570676 CICQ96RK0 1608 aaPredicted RBP20.51■□□□□ 0.87
RAB40B-203ENST00000570676 MTHFSP49914 203 aa20.5■□□□□ 0.87
RAB40B-203ENST00000570676 PLEKHO1Q53GL0 409 aaPredicted RBP20.5■□□□□ 0.87
RAB40B-203ENST00000570676 SULT6B1Q6IMI4 303 aa20.5■□□□□ 0.87
RAB40B-203ENST00000570676 COL23A1Q86Y22 540 aaPredicted RBP20.5■□□□□ 0.87
RAB40B-203ENST00000570676 SYT17Q9BSW7 474 aa20.5■□□□□ 0.87
RAB40B-203ENST00000570676 ADAMTS7Q9UKP4 1686 aa20.5■□□□□ 0.87
RAB40B-203ENST00000570676 AMOTQ4VCS5 1084 aa20.49■□□□□ 0.87
RAB40B-203ENST00000570676 ZNF530Q6P9A1 599 aaPredicted RBP20.49■□□□□ 0.87
RAB40B-203ENST00000570676 ASAP1Q9ULH1 1129 aa20.49■□□□□ 0.87
RAB40B-203ENST00000570676 LOC102724428A0A0B4J2F2 783 aa20.48■□□□□ 0.87
RAB40B-203ENST00000570676 SIK1P57059 783 aa20.48■□□□□ 0.87
RAB40B-203ENST00000570676 TJP1Q07157 1748 aa20.47■□□□□ 0.87
RAB40B-203ENST00000570676 HSP90AB1P08238 724 aaKnown RBP20.47■□□□□ 0.87
RAB40B-203ENST00000570676 AMIGO3Q86WK7 504 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms