RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 ATP5J2-PTCD1G3V325 749 aa11.65□□□□□ -0.54
CHD9-220ENST00000569794 GAS6Q14393 721 aa11.65□□□□□ -0.54
CHD9-220ENST00000569794 SUZ12Q15022 739 aaKnown RBP11.65□□□□□ -0.54
CHD9-220ENST00000569794 PCMTD1Q96MG8 357 aaPredicted RBP11.65□□□□□ -0.54
CHD9-220ENST00000569794 PCDHB9Q9Y5E1 797 aa11.65□□□□□ -0.54
CHD9-220ENST00000569794 FBXO45P0C2W1 286 aa11.64□□□□□ -0.55
CHD9-220ENST00000569794 RHOQP17081 205 aa11.64□□□□□ -0.55
CHD9-220ENST00000569794 SRSF11Q05519 484 aaKnown RBP11.64□□□□□ -0.55
CHD9-220ENST00000569794 GJD4Q96KN9 370 aaPredicted RBP11.64□□□□□ -0.55
CHD9-220ENST00000569794 GPC1P35052 558 aa11.62□□□□□ -0.55
CHD9-220ENST00000569794 IRS1P35568 1242 aa11.62□□□□□ -0.55
CHD9-220ENST00000569794 LYPD4Q6UWN0 246 aa11.62□□□□□ -0.55
CHD9-220ENST00000569794 MARSP56192 900 aaKnown RBP11.61□□□□□ -0.55
CHD9-220ENST00000569794 CCDC125Q86Z20 511 aa11.61□□□□□ -0.55
CHD9-220ENST00000569794 BCANQ96GW7 911 aa11.61□□□□□ -0.55
CHD9-220ENST00000569794 MEN1O00255 615 aa11.6□□□□□ -0.55
CHD9-220ENST00000569794 ERVK-9P63128 1117 aa11.6□□□□□ -0.55
CHD9-220ENST00000569794 TRIM22Q8IYM9 498 aa11.6□□□□□ -0.55
CHD9-220ENST00000569794 ZNF837Q96EG3 531 aaPredicted RBP11.6□□□□□ -0.55
CHD9-220ENST00000569794 A0A1W2PRU2 124 aa11.59□□□□□ -0.55
CHD9-220ENST00000569794 GMCL1Q96IK5 515 aa11.59□□□□□ -0.55
CHD9-220ENST00000569794 CELA2BP08218 269 aaPredicted RBP11.58□□□□□ -0.56
CHD9-220ENST00000569794 CC2D2BQ6DHV5 1058 aa11.58□□□□□ -0.56
CHD9-220ENST00000569794 DNMT3AQ9Y6K1 912 aaPredicted RBP11.58□□□□□ -0.56
CHD9-220ENST00000569794 MAP3K10Q02779 954 aa11.57□□□□□ -0.56
CHD9-220ENST00000569794 RNF20Q5VTR2 975 aa11.57□□□□□ -0.56
CHD9-220ENST00000569794 KANK3Q6NY19 840 aa11.57□□□□□ -0.56
CHD9-220ENST00000569794 SCARF2Q96GP6 870 aaPredicted RBP11.57□□□□□ -0.56
CHD9-220ENST00000569794 DBN1Q16643 649 aa11.56□□□□□ -0.56
CHD9-220ENST00000569794 MBIPQ9NS73 344 aa11.56□□□□□ -0.56
CHD9-220ENST00000569794 DYRK1BQ9Y463 629 aa11.56□□□□□ -0.56
CHD9-220ENST00000569794 RIPOR1Q6ZS17 1223 aa11.55□□□□□ -0.56
CHD9-220ENST00000569794 GPR25O00155 361 aa11.54□□□□□ -0.56
CHD9-220ENST00000569794 SCTRP47872 440 aa11.54□□□□□ -0.56
CHD9-220ENST00000569794 MCCD1P59942 119 aaPredicted RBP11.54□□□□□ -0.56
CHD9-220ENST00000569794 POU4F2Q12837 409 aa11.54□□□□□ -0.56
CHD9-220ENST00000569794 NR1H3Q13133 447 aa11.54□□□□□ -0.56
CHD9-220ENST00000569794 FOXR1Q6PIV2 292 aa11.54□□□□□ -0.56
CHD9-220ENST00000569794 IL27Q8NEV9 243 aa11.54□□□□□ -0.56
CHD9-220ENST00000569794 NLRP3Q96P20 1036 aa11.54□□□□□ -0.56
CHD9-220ENST00000569794 CLN3Q13286 438 aa11.53□□□□□ -0.56
CHD9-220ENST00000569794 SLC27A3Q5K4L6 730 aa11.53□□□□□ -0.56
CHD9-220ENST00000569794 CYP2U1Q7Z449 544 aa11.53□□□□□ -0.56
CHD9-220ENST00000569794 GRIP2Q9C0E4 1043 aa11.53□□□□□ -0.56
CHD9-220ENST00000569794 GPAT2Q6NUI2 795 aa11.52□□□□□ -0.57
CHD9-220ENST00000569794 NBPF10Q6P3W6 841 aaKnown RBP11.52□□□□□ -0.57
CHD9-220ENST00000569794 NBPF15Q8N660 670 aa11.52□□□□□ -0.57
CHD9-220ENST00000569794 ENAMQ9NRM1 1142 aa11.52□□□□□ -0.57
CHD9-220ENST00000569794 IGF1RP08069 1367 aa11.52□□□□□ -0.57
CHD9-220ENST00000569794 H7C1W4 665 aa11.51□□□□□ -0.57
CHD9-220ENST00000569794 TRAK2O60296 914 aa11.51□□□□□ -0.57
CHD9-220ENST00000569794 GPR37L1O60883 481 aa11.51□□□□□ -0.57
CHD9-220ENST00000569794 NEUROD2Q15784 382 aa11.51□□□□□ -0.57
CHD9-220ENST00000569794 GTPBP3Q969Y2 492 aaKnown RBP11.51□□□□□ -0.57
CHD9-220ENST00000569794 GAS2L1Q99501 681 aaPredicted RBP11.51□□□□□ -0.57
CHD9-220ENST00000569794 PCDHB11Q9Y5F2 797 aa11.51□□□□□ -0.57
CHD9-220ENST00000569794 SPATA31C2B4DYI2 1134 aa11.5□□□□□ -0.57
CHD9-220ENST00000569794 ZNF592Q92610 1267 aa11.5□□□□□ -0.57
CHD9-220ENST00000569794 OSBPL3Q9H4L5 887 aa11.5□□□□□ -0.57
CHD9-220ENST00000569794 IGHA1P01876 353 aa11.49□□□□□ -0.57
CHD9-220ENST00000569794 WDR44Q5JSH3 913 aa11.49□□□□□ -0.57
CHD9-220ENST00000569794 ARHGEF10LQ9HCE6 1279 aa11.49□□□□□ -0.57
CHD9-220ENST00000569794 SOCS7O14512 581 aa11.48□□□□□ -0.57
CHD9-220ENST00000569794 FOXK2Q01167 660 aa11.48□□□□□ -0.57
CHD9-220ENST00000569794 ZNF330Q9Y3S2 320 aaPredicted RBP11.48□□□□□ -0.57
CHD9-220ENST00000569794 BCRP11274 1271 aa11.47□□□□□ -0.57
CHD9-220ENST00000569794 MTMR14Q8NCE2 650 aa11.47□□□□□ -0.57
CHD9-220ENST00000569794 BANK1Q8NDB2 785 aa11.47□□□□□ -0.57
CHD9-220ENST00000569794 TRERF1Q96PN7 1200 aa11.47□□□□□ -0.57
CHD9-220ENST00000569794 ACDQ96AP0 544 aa11.46□□□□□ -0.57
CHD9-220ENST00000569794 TIMMDC1Q9NPL8 285 aa11.46□□□□□ -0.57
CHD9-220ENST00000569794 WASLO00401 505 aaPredicted RBP11.45□□□□□ -0.58
CHD9-220ENST00000569794 TAS1R3Q7RTX0 852 aa11.45□□□□□ -0.58
CHD9-220ENST00000569794 ESF1Q9H501 851 aaKnown RBP11.45□□□□□ -0.58
CHD9-220ENST00000569794 NDUFB9Q9Y6M9 179 aa11.45□□□□□ -0.58
CHD9-220ENST00000569794 CNTNAP5Q8WYK1 1306 aa11.44□□□□□ -0.58
CHD9-220ENST00000569794 F11P03951 625 aa11.44□□□□□ -0.58
CHD9-220ENST00000569794 NUCKS1Q9H1E3 243 aaKnown RBP11.44□□□□□ -0.58
CHD9-220ENST00000569794 RAB6BQ9NRW1 208 aa11.44□□□□□ -0.58
CHD9-220ENST00000569794 GNRH1P01148 92 aa11.43□□□□□ -0.58
CHD9-220ENST00000569794 MX2P20592 715 aa11.43□□□□□ -0.58
CHD9-220ENST00000569794 PHF20L1A8MW92 1017 aa11.42□□□□□ -0.58
CHD9-220ENST00000569794 NEDD1Q8NHV4 660 aa11.42□□□□□ -0.58
CHD9-220ENST00000569794 CNKSR1Q969H4 720 aa11.42□□□□□ -0.58
CHD9-220ENST00000569794 LRRC4BQ9NT99 713 aa11.42□□□□□ -0.58
CHD9-220ENST00000569794 IL2RAP01589 272 aa11.41□□□□□ -0.58
CHD9-220ENST00000569794 BEND7Q8N7W2 519 aaPredicted RBP11.41□□□□□ -0.58
CHD9-220ENST00000569794 ESYT1Q9BSJ8 1104 aa11.41□□□□□ -0.58
CHD9-220ENST00000569794 NSFL1CQ9UNZ2 370 aaKnown RBP11.41□□□□□ -0.58
CHD9-220ENST00000569794 THBS1P07996 1170 aa11.4□□□□□ -0.58
CHD9-220ENST00000569794 CENPCQ03188 943 aa11.4□□□□□ -0.58
CHD9-220ENST00000569794 DCAF5Q96JK2 942 aa11.4□□□□□ -0.58
CHD9-220ENST00000569794 SNRKQ9NRH2 765 aa11.4□□□□□ -0.58
CHD9-220ENST00000569794 BRPF1P55201 1214 aaPredicted RBP11.39□□□□□ -0.59
CHD9-220ENST00000569794 PODNQ7Z5L7 613 aa11.39□□□□□ -0.59
CHD9-220ENST00000569794 CCDC85AQ96PX6 553 aaPredicted RBP11.39□□□□□ -0.59
CHD9-220ENST00000569794 CDCA7Q9BWT1 371 aaPredicted RBP11.39□□□□□ -0.59
CHD9-220ENST00000569794 CEP126Q9P2H0 1117 aa11.39□□□□□ -0.59
CHD9-220ENST00000569794 HRH3Q9Y5N1 445 aa11.39□□□□□ -0.59
CHD9-220ENST00000569794 APBB1O00213 710 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms