RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 ABCC6O95255 1503 aa14.14□□□□□ -0.15
PDXDC1-216ENST00000569715 AHDC1Q5TGY3 1603 aaPredicted RBP14.14□□□□□ -0.15
PDXDC1-216ENST00000569715 TSPYL6Q8N831 410 aa14.13□□□□□ -0.15
PDXDC1-216ENST00000569715 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.13□□□□□ -0.15
PDXDC1-216ENST00000569715 FRAT1Q92837 279 aaPredicted RBP14.13□□□□□ -0.15
PDXDC1-216ENST00000569715 MAP3K5Q99683 1374 aa14.13□□□□□ -0.15
PDXDC1-216ENST00000569715 TNNQ9UQP3 1299 aa14.13□□□□□ -0.15
PDXDC1-216ENST00000569715 CT47B1P0C2W7 299 aaPredicted RBP14.12□□□□□ -0.15
PDXDC1-216ENST00000569715 SSH1Q8WYL5 1049 aa14.12□□□□□ -0.15
PDXDC1-216ENST00000569715 RTF1Q92541 710 aaKnown RBP14.12□□□□□ -0.15
PDXDC1-216ENST00000569715 GNAT3A8MTJ3 354 aa14.12□□□□□ -0.15
PDXDC1-216ENST00000569715 PRDM11Q9NQV5 511 aa14.12□□□□□ -0.15
PDXDC1-216ENST00000569715 NLRP2Q9NX02 1062 aa14.12□□□□□ -0.15
PDXDC1-216ENST00000569715 MIS18AQ9NYP9 233 aa14.12□□□□□ -0.15
PDXDC1-216ENST00000569715 ELL2O00472 640 aaPredicted RBP14.11□□□□□ -0.15
PDXDC1-216ENST00000569715 HAP1P54257 671 aaPredicted RBP14.11□□□□□ -0.15
PDXDC1-216ENST00000569715 VIRMAQ69YN4 1812 aaKnown RBP14.11□□□□□ -0.15
PDXDC1-216ENST00000569715 C8orf58Q8NAV2 365 aa14.11□□□□□ -0.15
PDXDC1-216ENST00000569715 CHL1O00533 1208 aa14.11□□□□□ -0.15
PDXDC1-216ENST00000569715 CANXP27824 592 aaKnown RBP14.11□□□□□ -0.15
PDXDC1-216ENST00000569715 KRT24Q2M2I5 525 aa14.11□□□□□ -0.15
PDXDC1-216ENST00000569715 SMC4Q9NTJ3 1288 aa14.11□□□□□ -0.15
PDXDC1-216ENST00000569715 IL17REQ8NFR9 667 aa14.1□□□□□ -0.15
PDXDC1-216ENST00000569715 CSB-PGBD3P0DP91 1061 aa14.1□□□□□ -0.15
PDXDC1-216ENST00000569715 PANK1Q8TE04 598 aa14.1□□□□□ -0.15
PDXDC1-216ENST00000569715 CCDC136Q96JN2 1154 aa14.1□□□□□ -0.15
PDXDC1-216ENST00000569715 MEGF6O75095 1541 aa14.09□□□□□ -0.15
PDXDC1-216ENST00000569715 VAMP4O75379 141 aa14.09□□□□□ -0.15
PDXDC1-216ENST00000569715 PHLPP1O60346 1717 aa14.09□□□□□ -0.15
PDXDC1-216ENST00000569715 ZNF530Q6P9A1 599 aaPredicted RBP14.09□□□□□ -0.15
PDXDC1-216ENST00000569715 HTATSF1O43719 755 aaKnown RBP14.08□□□□□ -0.15
PDXDC1-216ENST00000569715 RLBP1P12271 317 aa14.08□□□□□ -0.15
PDXDC1-216ENST00000569715 COL5A2P05997 1499 aaPredicted RBP14.08□□□□□ -0.15
PDXDC1-216ENST00000569715 TWISTNBQ3B726 338 aaPredicted RBP14.08□□□□□ -0.16
PDXDC1-216ENST00000569715 COL16A1Q07092 1604 aaPredicted RBP14.08□□□□□ -0.16
PDXDC1-216ENST00000569715 COL22A1Q8NFW1 1626 aaPredicted RBP14.07□□□□□ -0.16
PDXDC1-216ENST00000569715 TCERG1O14776 1098 aaKnown RBP14.07□□□□□ -0.16
PDXDC1-216ENST00000569715 PLEKHO1Q53GL0 409 aaPredicted RBP14.07□□□□□ -0.16
PDXDC1-216ENST00000569715 CLUAP1Q96AJ1 413 aa14.07□□□□□ -0.16
PDXDC1-216ENST00000569715 LGR6Q9HBX8 967 aa14.07□□□□□ -0.16
PDXDC1-216ENST00000569715 PIP4K2BP78356 416 aa14.07□□□□□ -0.16
PDXDC1-216ENST00000569715 CEMIPQ8WUJ3 1361 aa14.07□□□□□ -0.16
PDXDC1-216ENST00000569715 PDE3AQ14432 1141 aa14.06□□□□□ -0.16
PDXDC1-216ENST00000569715 TSPYL4Q9UJ04 414 aa14.06□□□□□ -0.16
PDXDC1-216ENST00000569715 COG6Q9Y2V7 657 aa14.06□□□□□ -0.16
PDXDC1-216ENST00000569715 ALDH1L2Q3SY69 923 aa14.05□□□□□ -0.16
PDXDC1-216ENST00000569715 AMOTQ4VCS5 1084 aa14.05□□□□□ -0.16
PDXDC1-216ENST00000569715 MPRIPQ6WCQ1 1025 aa14.05□□□□□ -0.16
PDXDC1-216ENST00000569715 NOB1Q9ULX3 412 aaKnown RBP14.05□□□□□ -0.16
PDXDC1-216ENST00000569715 AKAP4Q5JQC9 854 aa14.05□□□□□ -0.16
PDXDC1-216ENST00000569715 RAPGEF4Q8WZA2 1011 aa14.05□□□□□ -0.16
PDXDC1-216ENST00000569715 WDR17Q8IZU2 1322 aa14.05□□□□□ -0.16
PDXDC1-216ENST00000569715 TRIM27P14373 513 aa14.04□□□□□ -0.16
PDXDC1-216ENST00000569715 ZKSCAN2Q63HK3 967 aa14.04□□□□□ -0.16
PDXDC1-216ENST00000569715 PKD1L3Q7Z443 1732 aa14.04□□□□□ -0.16
PDXDC1-216ENST00000569715 MRPL50Q8N5N7 158 aaKnown RBP14.03□□□□□ -0.16
PDXDC1-216ENST00000569715 STRN4Q9NRL3 753 aa14.03□□□□□ -0.16
PDXDC1-216ENST00000569715 C1orf141Q5JVX7 400 aa14.03□□□□□ -0.16
PDXDC1-216ENST00000569715 ZNF428Q96B54 188 aa14.03□□□□□ -0.16
PDXDC1-216ENST00000569715 KDM3BQ7LBC6 1761 aa14.03□□□□□ -0.16
PDXDC1-216ENST00000569715 ADAMTS7Q9UKP4 1686 aa14.03□□□□□ -0.16
PDXDC1-216ENST00000569715 TATP17735 454 aaPredicted RBP14.03□□□□□ -0.16
PDXDC1-216ENST00000569715 TOM1L2Q6ZVM7 507 aa14.03□□□□□ -0.16
PDXDC1-216ENST00000569715 KIF16BQ96L93 1317 aa14.02□□□□□ -0.16
PDXDC1-216ENST00000569715 TOM1O60784 492 aa14.02□□□□□ -0.16
PDXDC1-216ENST00000569715 TAF7Q15545 349 aaPredicted RBP14.02□□□□□ -0.16
PDXDC1-216ENST00000569715 SIPA1L3O60292 1781 aaPredicted RBP14.02□□□□□ -0.17
PDXDC1-216ENST00000569715 LARP1Q6PKG0 1096 aaKnown RBP14.02□□□□□ -0.17
PDXDC1-216ENST00000569715 AEBP2Q6ZN18 517 aaPredicted RBP14.02□□□□□ -0.17
PDXDC1-216ENST00000569715 PARP4Q9UKK3 1724 aaKnown RBP14.02□□□□□ -0.17
PDXDC1-216ENST00000569715 RNMTO43148 476 aaKnown RBP14.02□□□□□ -0.17
PDXDC1-216ENST00000569715 ATF7IPQ6VMQ6 1270 aa14.02□□□□□ -0.17
PDXDC1-216ENST00000569715 COL14A1Q05707 1796 aaKnown RBP14.02□□□□□ -0.17
PDXDC1-216ENST00000569715 DZIP1LQ8IYY4 767 aaKnown RBP14.01□□□□□ -0.17
PDXDC1-216ENST00000569715 SCN11AQ9UI33 1791 aa14.01□□□□□ -0.17
PDXDC1-216ENST00000569715 UBAP1LF5GYI3 381 aa14.01□□□□□ -0.17
PDXDC1-216ENST00000569715 KDM6AO15550 1401 aaPredicted RBP14.01□□□□□ -0.17
PDXDC1-216ENST00000569715 BRPF1P55201 1214 aaPredicted RBP14.01□□□□□ -0.17
PDXDC1-216ENST00000569715 OVOS2A0A0G2JMS6 1433 aa14□□□□□ -0.17
PDXDC1-216ENST00000569715 FTSJ3Q8IY81 847 aaKnown RBP14□□□□□ -0.17
PDXDC1-216ENST00000569715 BTG4Q9NY30 223 aa14□□□□□ -0.17
PDXDC1-216ENST00000569715 KCNQ3O43525 872 aa13.99□□□□□ -0.17
PDXDC1-216ENST00000569715 SHANK3Q9BYB0 1731 aa13.99□□□□□ -0.17
PDXDC1-216ENST00000569715 CYP27B1O15528 508 aa13.99□□□□□ -0.17
PDXDC1-216ENST00000569715 PHKG2P15735 406 aa13.99□□□□□ -0.17
PDXDC1-216ENST00000569715 EVA1CP58658 441 aa13.99□□□□□ -0.17
PDXDC1-216ENST00000569715 TEFQ10587 303 aa13.99□□□□□ -0.17
PDXDC1-216ENST00000569715 MVPQ14764 893 aaKnown RBP13.99□□□□□ -0.17
PDXDC1-216ENST00000569715 SPG7Q9UQ90 795 aa13.99□□□□□ -0.17
PDXDC1-216ENST00000569715 PLCH1Q4KWH8 1693 aa13.99□□□□□ -0.17
PDXDC1-216ENST00000569715 CARD10Q9BWT7 1032 aa13.98□□□□□ -0.17
PDXDC1-216ENST00000569715 TMEM57Q8N5G2 664 aa13.98□□□□□ -0.17
PDXDC1-216ENST00000569715 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.98□□□□□ -0.171e-7■■■□□ 14.6
PDXDC1-216ENST00000569715 USP35Q9P2H5 1018 aa13.98□□□□□ -0.17
PDXDC1-216ENST00000569715 IPO8O15397 1037 aaKnown RBP13.97□□□□□ -0.17
PDXDC1-216ENST00000569715 BABAM1Q9NWV8 329 aa13.97□□□□□ -0.17
PDXDC1-216ENST00000569715 ADAMTS2O95450 1211 aa13.97□□□□□ -0.17
PDXDC1-216ENST00000569715 BTBD11A6QL63 1104 aa13.96□□□□□ -0.17
PDXDC1-216ENST00000569715 ITPRIPQ8IWB1 547 aa13.96□□□□□ -0.17
PDXDC1-216ENST00000569715 NECTIN2Q92692 538 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms