RNA–Protein interactions for RNA: ENST00000569566.2

MSLN-208, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-208ENST00000569566 C5P01031 1676 aa25.76■■□□□ 1.71
MSLN-208ENST00000569566 INSRP06213 1382 aa25.75■■□□□ 1.71
MSLN-208ENST00000569566 KIF24Q5T7B8 1368 aa25.75■■□□□ 1.71
MSLN-208ENST00000569566 AMPHP49418 695 aa25.75■■□□□ 1.71
MSLN-208ENST00000569566 TXNRD1Q16881 649 aa25.75■■□□□ 1.71
MSLN-208ENST00000569566 PDGFDQ9GZP0 370 aaPredicted RBP25.73■■□□□ 1.71
MSLN-208ENST00000569566 NBPF6Q5VWK0 638 aa25.68■■□□□ 1.7
MSLN-208ENST00000569566 USHBP1Q8N6Y0 703 aa25.68■■□□□ 1.7
MSLN-208ENST00000569566 NBPF4Q96M43 638 aa25.68■■□□□ 1.7
MSLN-208ENST00000569566 SPON1Q9HCB6 807 aa25.67■■□□□ 1.7
MSLN-208ENST00000569566 HSP90AB2PQ58FF8 381 aa25.66■■□□□ 1.7
MSLN-208ENST00000569566 EMILIN1Q9Y6C2 1016 aa25.66■■□□□ 1.7
MSLN-208ENST00000569566 DDX54Q8TDD1 881 aaKnown RBP25.65■■□□□ 1.7
MSLN-208ENST00000569566 SLC15A2Q16348 729 aa25.64■■□□□ 1.7
MSLN-208ENST00000569566 LRRC4BQ9NT99 713 aa25.63■■□□□ 1.69
MSLN-208ENST00000569566 STK32BQ9NY57 414 aa25.63■■□□□ 1.69
MSLN-208ENST00000569566 ZNF827Q17R98 1081 aa25.62■■□□□ 1.69
MSLN-208ENST00000569566 CGNL1Q0VF96 1302 aa25.62■■□□□ 1.69
MSLN-208ENST00000569566 HSPA5P11021 654 aaKnown RBP25.61■■□□□ 1.69
MSLN-208ENST00000569566 ZCRB1Q8TBF4 217 aaKnown RBP25.61■■□□□ 1.69
MSLN-208ENST00000569566 VIRMAQ69YN4 1812 aaKnown RBP25.6■■□□□ 1.69
MSLN-208ENST00000569566 UBR3Q6ZT12 1888 aa25.6■■□□□ 1.69
MSLN-208ENST00000569566 ZBTB7AO95365 584 aa25.59■■□□□ 1.69
MSLN-208ENST00000569566 PTGER2P43116 358 aa25.59■■□□□ 1.69
MSLN-208ENST00000569566 CCER1Q8TC90 406 aaPredicted RBP25.59■■□□□ 1.69
MSLN-208ENST00000569566 EIF4G2P78344 907 aaKnown RBP eCLIP25.58■■□□□ 1.69
MSLN-208ENST00000569566 C4BP0C0L5 1744 aa25.57■■□□□ 1.68
MSLN-208ENST00000569566 PRIM1P49642 420 aaKnown RBP25.56■■□□□ 1.68
MSLN-208ENST00000569566 RAPGEF4Q8WZA2 1011 aa25.56■■□□□ 1.68
MSLN-208ENST00000569566 CHD4Q14839 1912 aa25.56■■□□□ 1.68
MSLN-208ENST00000569566 PCDH11XQ9BZA7 1347 aa25.56■■□□□ 1.68
MSLN-208ENST00000569566 PCDH11YQ9BZA8 1340 aa25.56■■□□□ 1.68
MSLN-208ENST00000569566 SGIP1Q9BQI5 828 aa25.55■■□□□ 1.68
MSLN-208ENST00000569566 PPP1R1BQ9UD71 204 aaPredicted RBP25.55■■□□□ 1.68
MSLN-208ENST00000569566 TATP17735 454 aaPredicted RBP25.53■■□□□ 1.68
MSLN-208ENST00000569566 AKT1S1Q96B36 256 aa25.53■■□□□ 1.68
MSLN-208ENST00000569566 SYTL4Q96C24 671 aaPredicted RBP25.53■■□□□ 1.68
MSLN-208ENST00000569566 POLR3GLQ9BT43 218 aa25.53■■□□□ 1.68
MSLN-208ENST00000569566 WASHC2AQ641Q2 1341 aa25.53■■□□□ 1.68
MSLN-208ENST00000569566 SLC27A3Q5K4L6 730 aa25.52■■□□□ 1.68
MSLN-208ENST00000569566 CYP27B1O15528 508 aa25.51■■□□□ 1.67
MSLN-208ENST00000569566 KCNQ4P56696 695 aa25.51■■□□□ 1.67
MSLN-208ENST00000569566 MTFR1LQ9H019 292 aa25.51■■□□□ 1.67
MSLN-208ENST00000569566 POLKQ9UBT6 870 aa25.51■■□□□ 1.67
MSLN-208ENST00000569566 ATF5Q9Y2D1 282 aaPredicted RBP25.5■■□□□ 1.67
MSLN-208ENST00000569566 COL5A3P25940 1745 aaPredicted RBP25.49■■□□□ 1.67
MSLN-208ENST00000569566 PNPLA7Q6ZV29 1317 aa25.49■■□□□ 1.67
MSLN-208ENST00000569566 ZNF831Q5JPB2 1677 aa25.48■■□□□ 1.67
MSLN-208ENST00000569566 PPM1GO15355 546 aaPredicted RBP25.47■■□□□ 1.67
MSLN-208ENST00000569566 SCN11AQ9UI33 1791 aa25.46■■□□□ 1.67
MSLN-208ENST00000569566 PLEKHG2Q9H7P9 1386 aa25.46■■□□□ 1.67
MSLN-208ENST00000569566 EYA1Q99502 592 aa25.46■■□□□ 1.67
MSLN-208ENST00000569566 UTRNP46939 3433 aa25.46■■□□□ 1.67
MSLN-208ENST00000569566 PALLDQ8WX93 1383 aa25.45■■□□□ 1.67
MSLN-208ENST00000569566 MAP3K5Q99683 1374 aa25.45■■□□□ 1.67
MSLN-208ENST00000569566 PANK3Q9H999 370 aa25.45■■□□□ 1.66
MSLN-208ENST00000569566 IGSF1Q8N6C5 1336 aa25.43■■□□□ 1.66
MSLN-208ENST00000569566 TNNT2P45379 298 aaPredicted RBP25.43■■□□□ 1.66
MSLN-208ENST00000569566 EIF4A2Q14240 407 aaKnown RBP25.43■■□□□ 1.66
MSLN-208ENST00000569566 CCNL1Q9UK58 526 aaPredicted RBP25.43■■□□□ 1.66
MSLN-208ENST00000569566 CICQ96RK0 1608 aaPredicted RBP25.42■■□□□ 1.66
MSLN-208ENST00000569566 FHDC1Q9C0D6 1143 aaPredicted RBP25.41■■□□□ 1.66
MSLN-208ENST00000569566 C4AP0C0L4 1744 aa25.4■■□□□ 1.66
MSLN-208ENST00000569566 KIF7Q2M1P5 1343 aa25.39■■□□□ 1.66
MSLN-208ENST00000569566 NKX1-1Q15270 411 aaPredicted RBP25.38■■□□□ 1.65
MSLN-208ENST00000569566 TJP1Q07157 1748 aa25.37■■□□□ 1.65
MSLN-208ENST00000569566 SYT17Q9BSW7 474 aa25.36■■□□□ 1.65
MSLN-208ENST00000569566 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.36■■□□□ 1.65
MSLN-208ENST00000569566 KDM6AO15550 1401 aaPredicted RBP25.36■■□□□ 1.65
MSLN-208ENST00000569566 ADAMTS7Q9UKP4 1686 aa25.36■■□□□ 1.65
MSLN-208ENST00000569566 MYH14Q7Z406 1995 aaKnown RBP25.35■■□□□ 1.65
MSLN-208ENST00000569566 MPRIPQ6WCQ1 1025 aa25.35■■□□□ 1.65
MSLN-208ENST00000569566 SLC16A10Q8TF71 515 aa25.35■■□□□ 1.65
MSLN-208ENST00000569566 ARXQ96QS3 562 aa25.35■■□□□ 1.65
MSLN-208ENST00000569566 TFCP2L1Q9NZI6 479 aa25.35■■□□□ 1.65
MSLN-208ENST00000569566 SPG7Q9UQ90 795 aa25.35■■□□□ 1.65
MSLN-208ENST00000569566 GOLGB1Q14789 3259 aaKnown RBP25.35■■□□□ 1.65
MSLN-208ENST00000569566 KDRP35968 1356 aa25.34■■□□□ 1.65
MSLN-208ENST00000569566 PHKG2P15735 406 aa25.33■■□□□ 1.65
MSLN-208ENST00000569566 PIGBQ92521 554 aa25.33■■□□□ 1.65
MSLN-208ENST00000569566 AMER1Q5JTC6 1135 aaPredicted RBP25.32■■□□□ 1.64
MSLN-208ENST00000569566 KIF13BQ9NQT8 1826 aa25.31■■□□□ 1.64
MSLN-208ENST00000569566 KIAA1551Q9HCM1 1747 aa25.3■■□□□ 1.64
MSLN-208ENST00000569566 COL23A1Q86Y22 540 aaPredicted RBP25.3■■□□□ 1.64
MSLN-208ENST00000569566 COL3A1P02461 1466 aaPredicted RBP25.29■■□□□ 1.64
MSLN-208ENST00000569566 AMIGO3Q86WK7 504 aa25.29■■□□□ 1.64
MSLN-208ENST00000569566 YY1P25490 414 aa25.28■■□□□ 1.64
MSLN-208ENST00000569566 MORC1Q86VD1 984 aa25.28■■□□□ 1.64
MSLN-208ENST00000569566 MRC1P22897 1456 aa25.28■■□□□ 1.64
MSLN-208ENST00000569566 UBR2Q8IWV8 1755 aa25.27■■□□□ 1.64
MSLN-208ENST00000569566 AEBP1Q8IUX7 1158 aa25.27■■□□□ 1.64
MSLN-208ENST00000569566 IFNL2Q8IZJ0 200 aa25.27■■□□□ 1.64
MSLN-208ENST00000569566 SMARCC1Q92922 1105 aaPredicted RBP25.27■■□□□ 1.64
MSLN-208ENST00000569566 KNSTRNQ9Y448 316 aa25.26■■□□□ 1.63
MSLN-208ENST00000569566 TMOD3Q9NYL9 352 aa25.25■■□□□ 1.63
MSLN-208ENST00000569566 SIPA1L3O60292 1781 aaPredicted RBP25.25■■□□□ 1.63
MSLN-208ENST00000569566 LOC102724428A0A0B4J2F2 783 aa25.23■■□□□ 1.63
MSLN-208ENST00000569566 POLD1P28340 1107 aa25.23■■□□□ 1.63
MSLN-208ENST00000569566 SIK1P57059 783 aa25.23■■□□□ 1.63
MSLN-208ENST00000569566 ASAP1Q9ULH1 1129 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms