RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 CEP152O94986 1710 aa12□□□□□ -0.49
CCDC113-205ENST00000569374 CSB-PGBD3P0DP91 1061 aa11.99□□□□□ -0.49
CCDC113-205ENST00000569374 STAC3Q96MF2 364 aa11.99□□□□□ -0.49
CCDC113-205ENST00000569374 USTQ9Y2C2 406 aa11.99□□□□□ -0.49
CCDC113-205ENST00000569374 SLC27A5Q9Y2P5 690 aa11.99□□□□□ -0.49
CCDC113-205ENST00000569374 MROH1Q8NDA8 1641 aa11.99□□□□□ -0.49
CCDC113-205ENST00000569374 RFX1P22670 979 aa11.98□□□□□ -0.49
CCDC113-205ENST00000569374 EPS8L1Q8TE68 723 aa11.98□□□□□ -0.49
CCDC113-205ENST00000569374 MAP3K1Q13233 1512 aa11.97□□□□□ -0.49
CCDC113-205ENST00000569374 ST18O60284 1047 aa11.97□□□□□ -0.49
CCDC113-205ENST00000569374 CFAP70Q5T0N1 1121 aa11.97□□□□□ -0.49
CCDC113-205ENST00000569374 SALL2Q9Y467 1007 aaPredicted RBP11.97□□□□□ -0.49
CCDC113-205ENST00000569374 PTPN23Q9H3S7 1636 aa11.97□□□□□ -0.49
CCDC113-205ENST00000569374 MAST1Q9Y2H9 1570 aa11.96□□□□□ -0.49
CCDC113-205ENST00000569374 SETD1BQ9UPS6 1966 aaKnown RBP11.96□□□□□ -0.49
CCDC113-205ENST00000569374 PALM3A6NDB9 673 aaPredicted RBP11.96□□□□□ -0.49
CCDC113-205ENST00000569374 FAM205CA6NFA0 338 aa11.96□□□□□ -0.49
CCDC113-205ENST00000569374 GOLGA8CPA6NN73 597 aa11.96□□□□□ -0.49
CCDC113-205ENST00000569374 PER1O15534 1290 aaPredicted RBP11.96□□□□□ -0.49
CCDC113-205ENST00000569374 PUS10Q3MIT2 529 aaKnown RBP11.96□□□□□ -0.49
CCDC113-205ENST00000569374 LYPD8Q6UX82 237 aa11.96□□□□□ -0.49
CCDC113-205ENST00000569374 ANKK1Q8NFD2 765 aa11.96□□□□□ -0.49
CCDC113-205ENST00000569374 USB1Q9BQ65 265 aaKnown RBP11.96□□□□□ -0.49
CCDC113-205ENST00000569374 MYOM3Q5VTT5 1437 aa11.95□□□□□ -0.5
CCDC113-205ENST00000569374 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.95□□□□□ -0.5
CCDC113-205ENST00000569374 RNF17Q9BXT8 1623 aaKnown RBP11.95□□□□□ -0.5
CCDC113-205ENST00000569374 UHRF1BP1Q6BDS2 1440 aa11.94□□□□□ -0.5
CCDC113-205ENST00000569374 CEP170BQ9Y4F5 1589 aaPredicted RBP11.94□□□□□ -0.5
CCDC113-205ENST00000569374 LMOD1P29536 600 aaPredicted RBP11.94□□□□□ -0.5
CCDC113-205ENST00000569374 PPP4CP60510 307 aa11.94□□□□□ -0.5
CCDC113-205ENST00000569374 NPM2Q86SE8 214 aaKnown RBP11.94□□□□□ -0.5
CCDC113-205ENST00000569374 MARVELD3Q96A59 401 aa11.94□□□□□ -0.5
CCDC113-205ENST00000569374 CFAP65Q6ZU64 1925 aaKnown RBP11.94□□□□□ -0.5
CCDC113-205ENST00000569374 DNMT1P26358 1616 aaKnown RBP11.93□□□□□ -0.5
CCDC113-205ENST00000569374 CAMSAP1Q5T5Y3 1602 aa11.93□□□□□ -0.5
CCDC113-205ENST00000569374 ADGRD1Q6QNK2 874 aa11.93□□□□□ -0.5
CCDC113-205ENST00000569374 PTPRKQ15262 1439 aa11.93□□□□□ -0.5
CCDC113-205ENST00000569374 ZC3H4Q9UPT8 1303 aaKnown RBP11.92□□□□□ -0.5
CCDC113-205ENST00000569374 KDM5DQ9BY66 1539 aa11.92□□□□□ -0.5
CCDC113-205ENST00000569374 NR1I2O75469 434 aa11.92□□□□□ -0.5
CCDC113-205ENST00000569374 FMNL1O95466 1100 aaPredicted RBP11.92□□□□□ -0.5
CCDC113-205ENST00000569374 NR1H3Q13133 447 aa11.92□□□□□ -0.5
CCDC113-205ENST00000569374 ZNF592Q92610 1267 aa11.92□□□□□ -0.5
CCDC113-205ENST00000569374 TFIP11Q9UBB9 837 aaKnown RBP11.92□□□□□ -0.5
CCDC113-205ENST00000569374 RTEL1-TNFRSF6BF6WH68 1400 aa11.92□□□□□ -0.5
CCDC113-205ENST00000569374 LSM11P83369 360 aaKnown RBP eCLIP11.91□□□□□ -0.5
CCDC113-205ENST00000569374 CNTLNQ9NXG0 1405 aa11.91□□□□□ -0.5
CCDC113-205ENST00000569374 POLR1AO95602 1720 aaPredicted RBP11.91□□□□□ -0.5
CCDC113-205ENST00000569374 EIF2AK4Q9P2K8 1649 aaKnown RBP11.9□□□□□ -0.5
CCDC113-205ENST00000569374 BRD1O95696 1058 aa11.9□□□□□ -0.5
CCDC113-205ENST00000569374 GGT6Q6P531 493 aa11.9□□□□□ -0.5
CCDC113-205ENST00000569374 FKBPLQ9UIM3 349 aa11.9□□□□□ -0.5
CCDC113-205ENST00000569374 ZMYM3Q14202 1370 aa11.9□□□□□ -0.5
CCDC113-205ENST00000569374 NCOA1Q15788 1441 aa11.89□□□□□ -0.51
CCDC113-205ENST00000569374 ZBBXA8MT70 800 aa11.89□□□□□ -0.51
CCDC113-205ENST00000569374 SRPK2P78362 688 aaKnown RBP11.89□□□□□ -0.51
CCDC113-205ENST00000569374 BRICD5Q6PL45 260 aa11.89□□□□□ -0.51
CCDC113-205ENST00000569374 RNF19BQ6ZMZ0 732 aa11.89□□□□□ -0.51
CCDC113-205ENST00000569374 PCDHB3Q9Y5E6 796 aa11.89□□□□□ -0.51
CCDC113-205ENST00000569374 ABCC3O15438 1527 aa11.89□□□□□ -0.51
CCDC113-205ENST00000569374 DHX29Q7Z478 1369 aaKnown RBP11.89□□□□□ -0.51
CCDC113-205ENST00000569374 NEURL4Q96JN8 1562 aa11.88□□□□□ -0.51
CCDC113-205ENST00000569374 ZC3H13Q5T200 1668 aaKnown RBP11.88□□□□□ -0.51
CCDC113-205ENST00000569374 SOWAHBA6NEL2 793 aa11.88□□□□□ -0.51
CCDC113-205ENST00000569374 KCNA1Q09470 495 aa11.88□□□□□ -0.51
CCDC113-205ENST00000569374 PTPRNQ16849 979 aa11.88□□□□□ -0.51
CCDC113-205ENST00000569374 LHX8Q68G74 356 aa11.88□□□□□ -0.51
CCDC113-205ENST00000569374 SCUBE3Q8IX30 993 aa11.88□□□□□ -0.51
CCDC113-205ENST00000569374 UCN2Q96RP3 112 aa11.88□□□□□ -0.51
CCDC113-205ENST00000569374 TSR3Q9UJK0 312 aaKnown RBP11.88□□□□□ -0.51
CCDC113-205ENST00000569374 HPS5Q9UPZ3 1129 aa11.88□□□□□ -0.51
CCDC113-205ENST00000569374 ABCC5O15440 1437 aa11.87□□□□□ -0.51
CCDC113-205ENST00000569374 NPATQ14207 1427 aa11.87□□□□□ -0.51
CCDC113-205ENST00000569374 FGD6Q6ZV73 1430 aa11.87□□□□□ -0.51
CCDC113-205ENST00000569374 DEPDC5O75140 1603 aa11.87□□□□□ -0.51
CCDC113-205ENST00000569374 LTBP4Q8N2S1 1624 aa11.87□□□□□ -0.51
CCDC113-205ENST00000569374 TMCO4Q5TGY1 634 aa11.87□□□□□ -0.51
CCDC113-205ENST00000569374 BLOC1S3Q6QNY0 202 aa11.87□□□□□ -0.51
CCDC113-205ENST00000569374 HS3ST6Q96QI5 342 aa11.87□□□□□ -0.51
CCDC113-205ENST00000569374 MAFBQ9Y5Q3 323 aaPredicted RBP11.87□□□□□ -0.51
CCDC113-205ENST00000569374 TCOF1Q13428 1488 aaKnown RBP11.87□□□□□ -0.51
CCDC113-205ENST00000569374 ATP9BO43861 1147 aa11.86□□□□□ -0.51
CCDC113-205ENST00000569374 ATG7O95352 703 aa11.86□□□□□ -0.51
CCDC113-205ENST00000569374 JUNDP17535 347 aa11.86□□□□□ -0.51
CCDC113-205ENST00000569374 PRDM15P57071 1507 aaPredicted RBP11.86□□□□□ -0.51
CCDC113-205ENST00000569374 DAPK1P53355 1430 aa11.86□□□□□ -0.51
CCDC113-205ENST00000569374 MIA2Q96PC5 1412 aa11.86□□□□□ -0.51
CCDC113-205ENST00000569374 PZPP20742 1482 aa11.85□□□□□ -0.51
CCDC113-205ENST00000569374 KIF3BO15066 747 aa11.85□□□□□ -0.51
CCDC113-205ENST00000569374 HRO43593 1189 aa11.85□□□□□ -0.51
CCDC113-205ENST00000569374 NFATC2IPQ8NCF5 419 aa11.85□□□□□ -0.51
CCDC113-205ENST00000569374 ARMC2Q8NEN0 867 aa11.85□□□□□ -0.51
CCDC113-205ENST00000569374 SHANK2Q9UPX8 1470 aa11.84□□□□□ -0.51
CCDC113-205ENST00000569374 FBXO45P0C2W1 286 aa11.84□□□□□ -0.51
CCDC113-205ENST00000569374 GZF1Q9H116 711 aaPredicted RBP11.84□□□□□ -0.51
CCDC113-205ENST00000569374 STRCP1A6NGW2 1772 aa11.83□□□□□ -0.52
CCDC113-205ENST00000569374 DUOX2Q9NRD8 1548 aa11.83□□□□□ -0.52
CCDC113-205ENST00000569374 F12P00748 615 aaPredicted RBP11.83□□□□□ -0.52
CCDC113-205ENST00000569374 APLP1P51693 650 aa11.83□□□□□ -0.52
CCDC113-205ENST00000569374 ESF1Q9H501 851 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms