RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 PEAK1Q9H792 1746 aa12.74□□□□□ -0.37
UBR1-210ENST00000569337 TNS1Q9HBL0 1735 aaKnown RBP12.74□□□□□ -0.37
UBR1-210ENST00000569337 NPC1L1Q9UHC9 1359 aa12.74□□□□□ -0.37
UBR1-210ENST00000569337 DIEXFQ68CQ4 756 aaKnown RBP12.74□□□□□ -0.37
UBR1-210ENST00000569337 WNK3Q9BYP7 1800 aa12.73□□□□□ -0.37
UBR1-210ENST00000569337 MEGF6O75095 1541 aa12.72□□□□□ -0.37
UBR1-210ENST00000569337 EIF4A2Q14240 407 aaKnown RBP12.72□□□□□ -0.37
UBR1-210ENST00000569337 SYTL4Q96C24 671 aaPredicted RBP12.72□□□□□ -0.37
UBR1-210ENST00000569337 EYA1Q99502 592 aa12.72□□□□□ -0.37
UBR1-210ENST00000569337 FAM208AQ9UK61 1670 aaKnown RBP12.72□□□□□ -0.37
UBR1-210ENST00000569337 MAP2P11137 1827 aaKnown RBP12.72□□□□□ -0.37
UBR1-210ENST00000569337 TXNRD1Q16881 649 aa12.71□□□□□ -0.37
UBR1-210ENST00000569337 PROM2Q8N271 834 aa12.71□□□□□ -0.37
UBR1-210ENST00000569337 PCDH11XQ9BZA7 1347 aa12.7□□□□□ -0.38
UBR1-210ENST00000569337 PCDH11YQ9BZA8 1340 aa12.7□□□□□ -0.38
UBR1-210ENST00000569337 PRIM1P49642 420 aaKnown RBP12.7□□□□□ -0.38
UBR1-210ENST00000569337 PRKRIP1Q9H875 184 aaPredicted RBP12.69□□□□□ -0.38
UBR1-210ENST00000569337 SPG7Q9UQ90 795 aa12.69□□□□□ -0.38
UBR1-210ENST00000569337 SRCAPQ6ZRS2 3230 aa12.67□□□□□ -0.38
UBR1-210ENST00000569337 CYP27B1O15528 508 aa12.67□□□□□ -0.38
UBR1-210ENST00000569337 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.67□□□□□ -0.381e-11■■■■□ 20.7
UBR1-210ENST00000569337 NCAPD2Q15021 1401 aa12.66□□□□□ -0.38
UBR1-210ENST00000569337 MTHFSP49914 203 aa12.66□□□□□ -0.38
UBR1-210ENST00000569337 ANO8Q9HCE9 1232 aaPredicted RBP12.66□□□□□ -0.38
UBR1-210ENST00000569337 STK32BQ9NY57 414 aa12.66□□□□□ -0.38
UBR1-210ENST00000569337 SBF2Q86WG5 1849 aa12.66□□□□□ -0.38
UBR1-210ENST00000569337 RGPD2P0DJD1 1756 aa12.66□□□□□ -0.38
UBR1-210ENST00000569337 IGSF1Q8N6C5 1336 aa12.65□□□□□ -0.38
UBR1-210ENST00000569337 ANP32CO43423 234 aa12.65□□□□□ -0.38
UBR1-210ENST00000569337 PPP2R1AP30153 589 aa12.65□□□□□ -0.38
UBR1-210ENST00000569337 RALBP1Q15311 655 aa12.65□□□□□ -0.38
UBR1-210ENST00000569337 SLC15A2Q16348 729 aa12.65□□□□□ -0.38
UBR1-210ENST00000569337 NHSQ6T4R5 1651 aa12.64□□□□□ -0.39
UBR1-210ENST00000569337 SLC27A3Q5K4L6 730 aa12.64□□□□□ -0.39
UBR1-210ENST00000569337 MPRIPQ6WCQ1 1025 aa12.64□□□□□ -0.39
UBR1-210ENST00000569337 IFNL2Q8IZJ0 200 aa12.64□□□□□ -0.39
UBR1-210ENST00000569337 MIER1Q8N108 512 aa12.64□□□□□ -0.39
UBR1-210ENST00000569337 RREB1Q92766 1687 aa12.64□□□□□ -0.39
UBR1-210ENST00000569337 IL13P35225 146 aa12.63□□□□□ -0.39
UBR1-210ENST00000569337 NKX1-1Q15270 411 aaPredicted RBP12.63□□□□□ -0.39
UBR1-210ENST00000569337 PLEKHO1Q53GL0 409 aaPredicted RBP12.63□□□□□ -0.39
UBR1-210ENST00000569337 SULT6B1Q6IMI4 303 aa12.63□□□□□ -0.39
UBR1-210ENST00000569337 LRRC4BQ9NT99 713 aa12.63□□□□□ -0.39
UBR1-210ENST00000569337 PHKG2P15735 406 aa12.62□□□□□ -0.39
UBR1-210ENST00000569337 AMOTQ4VCS5 1084 aa12.62□□□□□ -0.39
UBR1-210ENST00000569337 CCDC184Q52MB2 194 aa12.62□□□□□ -0.39
UBR1-210ENST00000569337 SPON1Q9HCB6 807 aa12.62□□□□□ -0.39
UBR1-210ENST00000569337 NUP188Q5SRE5 1749 aa12.62□□□□□ -0.39
UBR1-210ENST00000569337 RGPD3A6NKT7 1758 aaPredicted RBP12.61□□□□□ -0.39
UBR1-210ENST00000569337 RGPD4Q7Z3J3 1758 aa12.61□□□□□ -0.39
UBR1-210ENST00000569337 DIAPH1O60610 1272 aaKnown RBP12.61□□□□□ -0.39
UBR1-210ENST00000569337 KCNQ4P56696 695 aa12.61□□□□□ -0.39
UBR1-210ENST00000569337 AEBP1Q8IUX7 1158 aa12.61□□□□□ -0.39
UBR1-210ENST00000569337 CCNL1Q9UK58 526 aaPredicted RBP12.61□□□□□ -0.39
UBR1-210ENST00000569337 MYBBP1AQ9BQG0 1328 aaKnown RBP12.61□□□□□ -0.39
UBR1-210ENST00000569337 PLEKHG2Q9H7P9 1386 aa12.6□□□□□ -0.39
UBR1-210ENST00000569337 HSP90AB1P08238 724 aaKnown RBP12.6□□□□□ -0.39
UBR1-210ENST00000569337 ZNF530Q6P9A1 599 aaPredicted RBP12.6□□□□□ -0.39
UBR1-210ENST00000569337 PIGBQ92521 554 aa12.6□□□□□ -0.39
UBR1-210ENST00000569337 SMARCC1Q92922 1105 aaPredicted RBP12.6□□□□□ -0.39
UBR1-210ENST00000569337 C1orf141Q5JVX7 400 aa12.59□□□□□ -0.39
UBR1-210ENST00000569337 PDGFDQ9GZP0 370 aaPredicted RBP12.59□□□□□ -0.39
UBR1-210ENST00000569337 TMOD3Q9NYL9 352 aa12.59□□□□□ -0.39
UBR1-210ENST00000569337 BTAF1O14981 1849 aa12.58□□□□□ -0.4
UBR1-210ENST00000569337 ZBTB7AO95365 584 aa12.58□□□□□ -0.4
UBR1-210ENST00000569337 HMOX1P09601 288 aa12.58□□□□□ -0.4
UBR1-210ENST00000569337 HMGB2P26583 209 aaKnown RBP12.58□□□□□ -0.4
UBR1-210ENST00000569337 ZNF827Q17R98 1081 aa12.58□□□□□ -0.4
UBR1-210ENST00000569337 AKT1S1Q96B36 256 aa12.58□□□□□ -0.4
UBR1-210ENST00000569337 DCAF5Q96JK2 942 aa12.58□□□□□ -0.4
UBR1-210ENST00000569337 SHANK3Q9BYB0 1731 aa12.58□□□□□ -0.4
UBR1-210ENST00000569337 TFCP2L1Q9NZI6 479 aa12.58□□□□□ -0.4
UBR1-210ENST00000569337 PPP1R1BQ9UD71 204 aaPredicted RBP12.58□□□□□ -0.4
UBR1-210ENST00000569337 COL3A1P02461 1466 aaPredicted RBP12.58□□□□□ -0.4
UBR1-210ENST00000569337 KDRP35968 1356 aa12.57□□□□□ -0.4
UBR1-210ENST00000569337 PALLDQ8WX93 1383 aa12.57□□□□□ -0.4
UBR1-210ENST00000569337 CFAP53Q96M91 514 aa12.57□□□□□ -0.4
UBR1-210ENST00000569337 ATF5Q9Y2D1 282 aaPredicted RBP12.57□□□□□ -0.4
UBR1-210ENST00000569337 DOT1LQ8TEK3 1739 aa12.57□□□□□ -0.4
UBR1-210ENST00000569337 LRP5O75197 1615 aa12.56□□□□□ -0.4
UBR1-210ENST00000569337 ERVV-2B6SEH9 535 aa12.56□□□□□ -0.4
UBR1-210ENST00000569337 U2SURPO15042 1029 aaKnown RBP12.56□□□□□ -0.4
UBR1-210ENST00000569337 MTFR1LQ9H019 292 aa12.56□□□□□ -0.4
UBR1-210ENST00000569337 PKD1L3Q7Z443 1732 aa12.56□□□□□ -0.4
UBR1-210ENST00000569337 KAT6BQ8WYB5 2073 aa12.55□□□□□ -0.4
UBR1-210ENST00000569337 ADRA2BP18089 450 aa12.55□□□□□ -0.4
UBR1-210ENST00000569337 CABP4P57796 275 aa12.55□□□□□ -0.4
UBR1-210ENST00000569337 ASAP1Q9ULH1 1129 aa12.55□□□□□ -0.4
UBR1-210ENST00000569337 AKAP4Q5JQC9 854 aa12.54□□□□□ -0.4
UBR1-210ENST00000569337 NUDCQ9Y266 331 aa12.54□□□□□ -0.4
UBR1-210ENST00000569337 LOC102724428A0A0B4J2F2 783 aa12.53□□□□□ -0.4
UBR1-210ENST00000569337 CCER2I3L3R5 266 aa12.53□□□□□ -0.4
UBR1-210ENST00000569337 MSH5O43196 834 aa12.53□□□□□ -0.4
UBR1-210ENST00000569337 SIK1P57059 783 aa12.53□□□□□ -0.4
UBR1-210ENST00000569337 SLC16A10Q8TF71 515 aa12.53□□□□□ -0.4
UBR1-210ENST00000569337 ATG3Q9NT62 314 aa12.53□□□□□ -0.4
UBR1-210ENST00000569337 PNPLA7Q6ZV29 1317 aa12.53□□□□□ -0.4
UBR1-210ENST00000569337 ATP6V1AP38606 617 aa12.52□□□□□ -0.41
UBR1-210ENST00000569337 PTGER2P43116 358 aa12.52□□□□□ -0.41
UBR1-210ENST00000569337 MTHFSDQ2M296 383 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms