RNA–Protein interactions for RNA: ENST00000569254.5

TGFB1I1-216, transforming growth factor beta 1 induced transcript 1, humanhuman

TSL 4

Gene TGFB1I1, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1I1-216ENST00000569254 WDR43Q15061 677 aaKnown RBP eCLIP23.78■■□□□ 1.4
TGFB1I1-216ENST00000569254 NCAPD2Q15021 1401 aa23.77■■□□□ 1.4
TGFB1I1-216ENST00000569254 OVOS2A0A0G2JMS6 1433 aa23.76■■□□□ 1.39
TGFB1I1-216ENST00000569254 BRWD3Q6RI45 1802 aa23.76■■□□□ 1.39
TGFB1I1-216ENST00000569254 MARCH10Q8NA82 808 aaPredicted RBP23.76■■□□□ 1.39
TGFB1I1-216ENST00000569254 MRS2Q9HD23 443 aa23.76■■□□□ 1.39
TGFB1I1-216ENST00000569254 PARP4Q9UKK3 1724 aaKnown RBP23.76■■□□□ 1.39
TGFB1I1-216ENST00000569254 TNS2Q63HR2 1409 aa23.76■■□□□ 1.39
TGFB1I1-216ENST00000569254 WNK3Q9BYP7 1800 aa23.75■■□□□ 1.39
TGFB1I1-216ENST00000569254 NEFMP07197 916 aa23.75■■□□□ 1.39
TGFB1I1-216ENST00000569254 AMOTQ4VCS5 1084 aa23.75■■□□□ 1.39
TGFB1I1-216ENST00000569254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.75■■□□□ 1.39
TGFB1I1-216ENST00000569254 KDRP35968 1356 aa23.75■■□□□ 1.39
TGFB1I1-216ENST00000569254 FCHSD2O94868 740 aa23.74■■□□□ 1.39
TGFB1I1-216ENST00000569254 PRKAR2BP31323 418 aa23.74■■□□□ 1.39
TGFB1I1-216ENST00000569254 FAM196AQ6ZSG2 479 aa23.74■■□□□ 1.39
TGFB1I1-216ENST00000569254 RGPD1P0DJD0 1748 aa23.73■■□□□ 1.39
TGFB1I1-216ENST00000569254 CCDC184Q52MB2 194 aa23.73■■□□□ 1.39
TGFB1I1-216ENST00000569254 PNNQ9H307 717 aaKnown RBP23.73■■□□□ 1.39
TGFB1I1-216ENST00000569254 PCDH11XQ9BZA7 1347 aa23.73■■□□□ 1.39
TGFB1I1-216ENST00000569254 PCDH11YQ9BZA8 1340 aa23.73■■□□□ 1.39
TGFB1I1-216ENST00000569254 LRRC37A3O60309 1634 aa23.73■■□□□ 1.39
TGFB1I1-216ENST00000569254 RSPH6AQ9H0K4 717 aa23.72■■□□□ 1.39
TGFB1I1-216ENST00000569254 ZNF530Q6P9A1 599 aaPredicted RBP23.71■■□□□ 1.39
TGFB1I1-216ENST00000569254 C1orf141Q5JVX7 400 aa23.7■■□□□ 1.38
TGFB1I1-216ENST00000569254 IFNL2Q8IZJ0 200 aa23.7■■□□□ 1.38
TGFB1I1-216ENST00000569254 CYP27B1O15528 508 aa23.69■■□□□ 1.38
TGFB1I1-216ENST00000569254 MTHFSDQ2M296 383 aaKnown RBP23.67■■□□□ 1.38
TGFB1I1-216ENST00000569254 ADAMTS8Q9UP79 889 aa23.67■■□□□ 1.38
TGFB1I1-216ENST00000569254 PLEKHG2Q9H7P9 1386 aa23.66■■□□□ 1.38
TGFB1I1-216ENST00000569254 PHKG2P15735 406 aa23.66■■□□□ 1.38
TGFB1I1-216ENST00000569254 GAS2L2Q8NHY3 880 aa23.66■■□□□ 1.38
TGFB1I1-216ENST00000569254 ACSBG1Q96GR2 724 aa23.66■■□□□ 1.38
TGFB1I1-216ENST00000569254 PHACTR3Q96KR7 559 aa23.66■■□□□ 1.38
TGFB1I1-216ENST00000569254 MAPK8IP3Q9UPT6 1336 aa23.65■■□□□ 1.38
TGFB1I1-216ENST00000569254 TRIM37O94972 964 aa23.65■■□□□ 1.38
TGFB1I1-216ENST00000569254 SF3B2Q13435 895 aaKnown RBP23.65■■□□□ 1.38
TGFB1I1-216ENST00000569254 MIER1Q8N108 512 aa23.65■■□□□ 1.38
TGFB1I1-216ENST00000569254 HSP90AB1P08238 724 aaKnown RBP23.64■■□□□ 1.37
TGFB1I1-216ENST00000569254 SYTL4Q96C24 671 aaPredicted RBP23.64■■□□□ 1.37
TGFB1I1-216ENST00000569254 KAT6BQ8WYB5 2073 aa23.64■■□□□ 1.37
TGFB1I1-216ENST00000569254 CCDC146Q8IYE0 955 aa23.63■■□□□ 1.37
TGFB1I1-216ENST00000569254 AKAP4Q5JQC9 854 aa23.62■■□□□ 1.37
TGFB1I1-216ENST00000569254 PNISRQ8TF01 805 aaKnown RBP23.62■■□□□ 1.37
TGFB1I1-216ENST00000569254 CCER2I3L3R5 266 aa23.61■■□□□ 1.37
TGFB1I1-216ENST00000569254 UPF1Q92900 1129 aaKnown RBP eCLIP23.61■■□□□ 1.37
TGFB1I1-216ENST00000569254 PLEKHF1Q96S99 279 aa23.61■■□□□ 1.37
TGFB1I1-216ENST00000569254 PKD1L3Q7Z443 1732 aa23.61■■□□□ 1.37
TGFB1I1-216ENST00000569254 PRIM1P49642 420 aaKnown RBP23.6■■□□□ 1.37
TGFB1I1-216ENST00000569254 NKX1-1Q15270 411 aaPredicted RBP23.6■■□□□ 1.37
TGFB1I1-216ENST00000569254 MPRIPQ6WCQ1 1025 aa23.6■■□□□ 1.37
TGFB1I1-216ENST00000569254 FAM9BQ8IZU0 186 aa23.6■■□□□ 1.37
TGFB1I1-216ENST00000569254 RUNDC1Q96C34 613 aa23.6■■□□□ 1.37
TGFB1I1-216ENST00000569254 CCDC125Q86Z20 511 aa23.59■■□□□ 1.37
TGFB1I1-216ENST00000569254 DCAF5Q96JK2 942 aa23.59■■□□□ 1.37
TGFB1I1-216ENST00000569254 GNAT3A8MTJ3 354 aa23.58■■□□□ 1.37
TGFB1I1-216ENST00000569254 KCNQ2O43526 872 aa23.58■■□□□ 1.37
TGFB1I1-216ENST00000569254 BCL11BQ9C0K0 894 aaPredicted RBP23.58■■□□□ 1.37
TGFB1I1-216ENST00000569254 SHANK3Q9BYB0 1731 aa23.58■■□□□ 1.37
TGFB1I1-216ENST00000569254 BCL9O00512 1426 aa23.58■■□□□ 1.36
TGFB1I1-216ENST00000569254 SOCS7O14512 581 aa23.57■■□□□ 1.36
TGFB1I1-216ENST00000569254 APBA3O96018 575 aa23.57■■□□□ 1.36
TGFB1I1-216ENST00000569254 RTF1Q92541 710 aaKnown RBP23.57■■□□□ 1.36
TGFB1I1-216ENST00000569254 NFE2L2Q16236 605 aa23.55■■□□□ 1.36
TGFB1I1-216ENST00000569254 PTF1AQ7RTS3 328 aa23.55■■□□□ 1.36
TGFB1I1-216ENST00000569254 MAP3K5Q99683 1374 aa23.54■■□□□ 1.36
TGFB1I1-216ENST00000569254 CABP4P57796 275 aa23.54■■□□□ 1.36
TGFB1I1-216ENST00000569254 TMOD3Q9NYL9 352 aa23.54■■□□□ 1.36
TGFB1I1-216ENST00000569254 ERVV-2B6SEH9 535 aa23.53■■□□□ 1.36
TGFB1I1-216ENST00000569254 RNMTO43148 476 aaKnown RBP23.53■■□□□ 1.36
TGFB1I1-216ENST00000569254 NEUROD2Q15784 382 aa23.53■■□□□ 1.36
TGFB1I1-216ENST00000569254 LGR6Q9HBX8 967 aa23.53■■□□□ 1.36
TGFB1I1-216ENST00000569254 BAG6P46379 1132 aa23.52■■□□□ 1.36
TGFB1I1-216ENST00000569254 RIPK4P57078 832 aa23.52■■□□□ 1.36
TGFB1I1-216ENST00000569254 RRP7AQ9Y3A4 280 aaKnown RBP23.52■■□□□ 1.36
TGFB1I1-216ENST00000569254 TMPOP42166 694 aaKnown RBP23.51■■□□□ 1.35
TGFB1I1-216ENST00000569254 APAF1O14727 1248 aa23.49■■□□□ 1.35
TGFB1I1-216ENST00000569254 HTATSF1O43719 755 aaKnown RBP23.49■■□□□ 1.35
TGFB1I1-216ENST00000569254 TEFQ10587 303 aa23.49■■□□□ 1.35
TGFB1I1-216ENST00000569254 DEFB132Q7Z7B7 95 aa23.49■■□□□ 1.35
TGFB1I1-216ENST00000569254 IL17REQ8NFR9 667 aa23.49■■□□□ 1.35
TGFB1I1-216ENST00000569254 PIGBQ92521 554 aa23.49■■□□□ 1.35
TGFB1I1-216ENST00000569254 KDM6AO15550 1401 aaPredicted RBP23.49■■□□□ 1.35
TGFB1I1-216ENST00000569254 SBF2Q86WG5 1849 aa23.48■■□□□ 1.35
TGFB1I1-216ENST00000569254 EN1Q05925 392 aaPredicted RBP23.48■■□□□ 1.35
TGFB1I1-216ENST00000569254 DCTN1Q14203 1278 aa23.48■■□□□ 1.35
TGFB1I1-216ENST00000569254 MCM10Q7L590 875 aa23.48■■□□□ 1.35
TGFB1I1-216ENST00000569254 NFATC2IPQ8NCF5 419 aa23.48■■□□□ 1.35
TGFB1I1-216ENST00000569254 DOT1LQ8TEK3 1739 aa23.47■■□□□ 1.35
TGFB1I1-216ENST00000569254 LMOD3Q0VAK6 560 aa23.47■■□□□ 1.35
TGFB1I1-216ENST00000569254 SENP3-EIF4A1A0A087X0R7 540 aa23.46■■□□□ 1.35
TGFB1I1-216ENST00000569254 SLC52A2Q9HAB3 445 aa23.46■■□□□ 1.35
TGFB1I1-216ENST00000569254 NHSQ6T4R5 1651 aa23.44■■□□□ 1.34
TGFB1I1-216ENST00000569254 PLSCR1O15162 318 aa23.43■■□□□ 1.34
TGFB1I1-216ENST00000569254 SMARCC1Q92922 1105 aaPredicted RBP23.43■■□□□ 1.34
TGFB1I1-216ENST00000569254 EP400Q96L91 3159 aa23.42■■□□□ 1.34
TGFB1I1-216ENST00000569254 EZH2Q15910 746 aaKnown RBP23.42■■□□□ 1.34
TGFB1I1-216ENST00000569254 THUMPD2Q9BTF0 503 aaKnown RBP23.41■■□□□ 1.34
TGFB1I1-216ENST00000569254 ASAP1Q9ULH1 1129 aa23.41■■□□□ 1.34
TGFB1I1-216ENST00000569254 SALL2Q9Y467 1007 aaPredicted RBP23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms