RNA–Protein interactions for RNA: ENST00000569204.1

EPB42-208, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 3

Gene EPB42, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-208ENST00000569204 KIF24Q5T7B8 1368 aa22.22■■□□□ 1.15
EPB42-208ENST00000569204 HSP90AB2PQ58FF8 381 aa22.21■■□□□ 1.15
EPB42-208ENST00000569204 ATF5Q9Y2D1 282 aaPredicted RBP22.21■■□□□ 1.15
EPB42-208ENST00000569204 FLT4P35916 1363 aa22.21■■□□□ 1.15
EPB42-208ENST00000569204 PTGER2P43116 358 aa22.2■■□□□ 1.14
EPB42-208ENST00000569204 USHBP1Q8N6Y0 703 aa22.2■■□□□ 1.14
EPB42-208ENST00000569204 LRRC4BQ9NT99 713 aa22.2■■□□□ 1.14
EPB42-208ENST00000569204 CGNL1Q0VF96 1302 aa22.2■■□□□ 1.14
EPB42-208ENST00000569204 PRIM1P49642 420 aaKnown RBP22.19■■□□□ 1.14
EPB42-208ENST00000569204 SYTL4Q96C24 671 aaPredicted RBP22.19■■□□□ 1.14
EPB42-208ENST00000569204 MTFR1LQ9H019 292 aa22.19■■□□□ 1.14
EPB42-208ENST00000569204 LY75O60449 1722 aa22.19■■□□□ 1.14
EPB42-208ENST00000569204 SLC27A3Q5K4L6 730 aa22.18■■□□□ 1.14
EPB42-208ENST00000569204 RAPGEF4Q8WZA2 1011 aa22.18■■□□□ 1.14
EPB42-208ENST00000569204 MAP2P11137 1827 aaKnown RBP22.17■■□□□ 1.14
EPB42-208ENST00000569204 QSER1Q2KHR3 1735 aa22.17■■□□□ 1.14
EPB42-208ENST00000569204 ZNF827Q17R98 1081 aa22.17■■□□□ 1.14
EPB42-208ENST00000569204 NSD2O96028 1365 aa22.16■■□□□ 1.14
EPB42-208ENST00000569204 TATP17735 454 aaPredicted RBP22.16■■□□□ 1.14
EPB42-208ENST00000569204 ANKRD26Q9UPS8 1709 aa22.16■■□□□ 1.14
EPB42-208ENST00000569204 DCAF8L1A6NGE4 600 aa22.15■■□□□ 1.14
EPB42-208ENST00000569204 EMILIN1Q9Y6C2 1016 aa22.15■■□□□ 1.14
EPB42-208ENST00000569204 AKT1S1Q96B36 256 aa22.14■■□□□ 1.13
EPB42-208ENST00000569204 SGIP1Q9BQI5 828 aa22.14■■□□□ 1.13
EPB42-208ENST00000569204 POLR3GLQ9BT43 218 aa22.13■■□□□ 1.13
EPB42-208ENST00000569204 TUBGCP6Q96RT7 1819 aa22.13■■□□□ 1.13
EPB42-208ENST00000569204 PCDH11XQ9BZA7 1347 aa22.11■■□□□ 1.13
EPB42-208ENST00000569204 PCDH11YQ9BZA8 1340 aa22.11■■□□□ 1.13
EPB42-208ENST00000569204 CCER1Q8TC90 406 aaPredicted RBP22.11■■□□□ 1.13
EPB42-208ENST00000569204 PPM1GO15355 546 aaPredicted RBP22.1■■□□□ 1.13
EPB42-208ENST00000569204 KCNQ4P56696 695 aa22.1■■□□□ 1.13
EPB42-208ENST00000569204 EIF4G2P78344 907 aaKnown RBP eCLIP22.1■■□□□ 1.13
EPB42-208ENST00000569204 PKD1L3Q7Z443 1732 aa22.1■■□□□ 1.13
EPB42-208ENST00000569204 WASHC2AQ641Q2 1341 aa22.09■■□□□ 1.13
EPB42-208ENST00000569204 FHDC1Q9C0D6 1143 aaPredicted RBP22.09■■□□□ 1.13
EPB42-208ENST00000569204 NCAPD2Q15021 1401 aa22.08■■□□□ 1.13
EPB42-208ENST00000569204 YY1P25490 414 aa22.08■■□□□ 1.13
EPB42-208ENST00000569204 SYT17Q9BSW7 474 aa22.08■■□□□ 1.13
EPB42-208ENST00000569204 CCNL1Q9UK58 526 aaPredicted RBP22.08■■□□□ 1.13
EPB42-208ENST00000569204 ITGB4P16144 1822 aa22.08■■□□□ 1.12
EPB42-208ENST00000569204 PNPLA7Q6ZV29 1317 aa22.07■■□□□ 1.12
EPB42-208ENST00000569204 COL24A1Q17RW2 1714 aa22.07■■□□□ 1.12
EPB42-208ENST00000569204 HSPA5P11021 654 aaKnown RBP22.07■■□□□ 1.12
EPB42-208ENST00000569204 SLC16A10Q8TF71 515 aa22.07■■□□□ 1.12
EPB42-208ENST00000569204 ARXQ96QS3 562 aa22.07■■□□□ 1.12
EPB42-208ENST00000569204 TOGARAM1Q9Y4F4 1720 aa22.06■■□□□ 1.12
EPB42-208ENST00000569204 CYP27B1O15528 508 aa22.06■■□□□ 1.12
EPB42-208ENST00000569204 TFCP2L1Q9NZI6 479 aa22.06■■□□□ 1.12
EPB42-208ENST00000569204 POLKQ9UBT6 870 aa22.06■■□□□ 1.12
EPB42-208ENST00000569204 C5P01031 1676 aa22.04■■□□□ 1.12
EPB42-208ENST00000569204 EYA1Q99502 592 aa22.03■■□□□ 1.12
EPB42-208ENST00000569204 TAF1LQ8IZX4 1826 aa22.03■■□□□ 1.12
EPB42-208ENST00000569204 MPRIPQ6WCQ1 1025 aa22.02■■□□□ 1.12
EPB42-208ENST00000569204 MAP3K5Q99683 1374 aa22.01■■□□□ 1.11
EPB42-208ENST00000569204 TNNT2P45379 298 aaPredicted RBP22.01■■□□□ 1.11
EPB42-208ENST00000569204 PANK3Q9H999 370 aa22.01■■□□□ 1.11
EPB42-208ENST00000569204 SPG7Q9UQ90 795 aa22.01■■□□□ 1.11
EPB42-208ENST00000569204 PALLDQ8WX93 1383 aa21.99■■□□□ 1.11
EPB42-208ENST00000569204 POLD1P28340 1107 aa21.99■■□□□ 1.11
EPB42-208ENST00000569204 NKX1-1Q15270 411 aaPredicted RBP21.99■■□□□ 1.11
EPB42-208ENST00000569204 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.99■■□□□ 1.11
EPB42-208ENST00000569204 HMGB2P26583 209 aaKnown RBP21.98■■□□□ 1.11
EPB42-208ENST00000569204 EIF4A2Q14240 407 aaKnown RBP21.98■■□□□ 1.11
EPB42-208ENST00000569204 SMARCC1Q92922 1105 aaPredicted RBP21.97■■□□□ 1.11
EPB42-208ENST00000569204 CHD4Q14839 1912 aa21.96■■□□□ 1.11
EPB42-208ENST00000569204 COL23A1Q86Y22 540 aaPredicted RBP21.96■■□□□ 1.11
EPB42-208ENST00000569204 PIGBQ92521 554 aa21.95■■□□□ 1.1
EPB42-208ENST00000569204 MSH5O43196 834 aa21.94■■□□□ 1.1
EPB42-208ENST00000569204 IFNL2Q8IZJ0 200 aa21.94■■□□□ 1.1
EPB42-208ENST00000569204 C4BP0C0L5 1744 aa21.94■■□□□ 1.1
EPB42-208ENST00000569204 PHKG2P15735 406 aa21.93■■□□□ 1.1
EPB42-208ENST00000569204 KLHL34Q8N239 644 aa21.93■■□□□ 1.1
EPB42-208ENST00000569204 PLEKHG2Q9H7P9 1386 aa21.92■■□□□ 1.1
EPB42-208ENST00000569204 IGSF1Q8N6C5 1336 aa21.92■■□□□ 1.1
EPB42-208ENST00000569204 TMOD3Q9NYL9 352 aa21.91■■□□□ 1.1
EPB42-208ENST00000569204 UBR3Q6ZT12 1888 aa21.9■■□□□ 1.1
EPB42-208ENST00000569204 MORC1Q86VD1 984 aa21.9■■□□□ 1.1
EPB42-208ENST00000569204 FLAD1Q8NFF5 587 aa21.9■■□□□ 1.1
EPB42-208ENST00000569204 AK7Q96M32 723 aa21.88■■□□□ 1.09
EPB42-208ENST00000569204 KNSTRNQ9Y448 316 aa21.88■■□□□ 1.09
EPB42-208ENST00000569204 LOC102724428A0A0B4J2F2 783 aa21.87■■□□□ 1.09
EPB42-208ENST00000569204 SIK1P57059 783 aa21.87■■□□□ 1.09
EPB42-208ENST00000569204 GPR162Q16538 588 aa21.87■■□□□ 1.09
EPB42-208ENST00000569204 MSL1Q68DK7 614 aa21.87■■□□□ 1.09
EPB42-208ENST00000569204 NLGN2Q8NFZ4 835 aa21.86■■□□□ 1.09
EPB42-208ENST00000569204 ASAP1Q9ULH1 1129 aa21.86■■□□□ 1.09
EPB42-208ENST00000569204 UTRNP46939 3433 aa21.84■■□□□ 1.09
EPB42-208ENST00000569204 HSP90AB1P08238 724 aaKnown RBP21.84■■□□□ 1.09
EPB42-208ENST00000569204 PLEKHO1Q53GL0 409 aaPredicted RBP21.84■■□□□ 1.09
EPB42-208ENST00000569204 AMIGO3Q86WK7 504 aa21.84■■□□□ 1.09
EPB42-208ENST00000569204 LINC00116Q8NCU8 138 aa21.84■■□□□ 1.09
EPB42-208ENST00000569204 KIF7Q2M1P5 1343 aa21.83■■□□□ 1.09
EPB42-208ENST00000569204 ATG3Q9NT62 314 aa21.83■■□□□ 1.09
EPB42-208ENST00000569204 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.82■■□□□ 1.08
EPB42-208ENST00000569204 ERVV-2B6SEH9 535 aa21.82■■□□□ 1.08
EPB42-208ENST00000569204 PHF14O94880 888 aa21.82■■□□□ 1.08
EPB42-208ENST00000569204 ATP6V1AP38606 617 aa21.82■■□□□ 1.08
EPB42-208ENST00000569204 AMOTQ4VCS5 1084 aa21.82■■□□□ 1.08
EPB42-208ENST00000569204 AMER1Q5JTC6 1135 aaPredicted RBP21.82■■□□□ 1.08
EPB42-208ENST00000569204 PELP1Q8IZL8 1130 aaKnown RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms