RNA–Protein interactions for RNA: ENST00000569189.2

GGA2-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, human

TSL 5

Gene GGA2, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA2-215	ENST00000569189	SRCAP	Q6ZRS2	3230 aa		33.28	■■■□□ 2.92
GGA2-215	ENST00000569189	ZCRB1	Q8TBF4	217 aa	Known RBP	33.28	■■■□□ 2.92
GGA2-215	ENST00000569189	NCAPD2	Q15021	1401 aa		33.28	■■■□□ 2.92
GGA2-215	ENST00000569189	PLSCR1	O15162	318 aa		33.27	■■■□□ 2.92
GGA2-215	ENST00000569189	AMER1	Q5JTC6	1135 aa	Predicted RBP	33.27	■■■□□ 2.92
GGA2-215	ENST00000569189	BTAF1	O14981	1849 aa		33.27	■■■□□ 2.92
GGA2-215	ENST00000569189	KCNQ2	O43526	872 aa		33.26	■■■□□ 2.91
GGA2-215	ENST00000569189	ACSBG1	Q96GR2	724 aa		33.26	■■■□□ 2.91
GGA2-215	ENST00000569189	PSD	A5PKW4	1024 aa	Predicted RBP	33.25	■■■□□ 2.91
GGA2-215	ENST00000569189	TAT	P17735	454 aa	Predicted RBP	33.25	■■■□□ 2.91
GGA2-215	ENST00000569189	DOT1L	Q8TEK3	1739 aa		33.25	■■■□□ 2.91
GGA2-215	ENST00000569189	PKD1L3	Q7Z443	1732 aa		33.23	■■■□□ 2.91
GGA2-215	ENST00000569189	PER1	O15534	1290 aa	Predicted RBP	33.22	■■■□□ 2.91
GGA2-215	ENST00000569189	EIF4A2	Q14240	407 aa	Known RBP	33.2	■■■□□ 2.91
GGA2-215	ENST00000569189	R3HDM1	Q15032	1099 aa	Known RBP	33.2	■■■□□ 2.91
GGA2-215	ENST00000569189	EYA1	Q99502	592 aa		33.2	■■■□□ 2.91
GGA2-215	ENST00000569189	NBPF14	Q5TI25	921 aa		33.17	■■■□□ 2.9
GGA2-215	ENST00000569189	PCDH11X	Q9BZA7	1347 aa		33.16	■■■□□ 2.9
GGA2-215	ENST00000569189	PCDH11Y	Q9BZA8	1340 aa		33.16	■■■□□ 2.9
GGA2-215	ENST00000569189	PROM2	Q8N271	834 aa		33.13	■■■□□ 2.89
GGA2-215	ENST00000569189	LRP5	O75197	1615 aa		33.13	■■■□□ 2.89
GGA2-215	ENST00000569189	NPC1L1	Q9UHC9	1359 aa		33.12	■■■□□ 2.89
GGA2-215	ENST00000569189	CC2D1B	Q5T0F9	858 aa	Known RBP	33.12	■■■□□ 2.89
GGA2-215	ENST00000569189	TXNRD1	Q16881	649 aa		33.11	■■■□□ 2.89
GGA2-215	ENST00000569189	IGSF1	Q8N6C5	1336 aa		33.1	■■■□□ 2.89
GGA2-215	ENST00000569189	SYTL4	Q96C24	671 aa	Predicted RBP	33.09	■■■□□ 2.89
GGA2-215	ENST00000569189	PRIM1	P49642	420 aa	Known RBP	33.08	■■■□□ 2.89
GGA2-215	ENST00000569189	CYP27B1	O15528	508 aa		33.07	■■■□□ 2.88
GGA2-215	ENST00000569189	TOGARAM1	Q9Y4F4	1720 aa		33.06	■■■□□ 2.88
GGA2-215	ENST00000569189	ANO8	Q9HCE9	1232 aa	Predicted RBP	33.06	■■■□□ 2.88
GGA2-215	ENST00000569189	SPG7	Q9UQ90	795 aa		33.06	■■■□□ 2.88
GGA2-215	ENST00000569189	PLEKHG2	Q9H7P9	1386 aa		33.06	■■■□□ 2.88
GGA2-215	ENST00000569189	ITGB4	P16144	1822 aa		33.05	■■■□□ 2.88
GGA2-215	ENST00000569189	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	33.04	■■■□□ 2.88	5e-10	■■■□□ 17.5
GGA2-215	ENST00000569189	LY75	O60449	1722 aa		33.03	■■■□□ 2.88
GGA2-215	ENST00000569189	MTHFS	P49914	203 aa		33.03	■■■□□ 2.88
GGA2-215	ENST00000569189	PAPPA	Q13219	1627 aa		33.02	■■■□□ 2.88
GGA2-215	ENST00000569189	CNGB1	Q14028	1251 aa	Predicted RBP	33.01	■■■□□ 2.87
GGA2-215	ENST00000569189	IL13	P35225	146 aa		32.99	■■■□□ 2.87
GGA2-215	ENST00000569189	CASZ1	Q86V15	1759 aa		32.97	■■■□□ 2.87
GGA2-215	ENST00000569189	NKX1-1	Q15270	411 aa	Predicted RBP	32.96	■■■□□ 2.87
GGA2-215	ENST00000569189	STK32B	Q9NY57	414 aa		32.96	■■■□□ 2.87
GGA2-215	ENST00000569189	AEBP1	Q8IUX7	1158 aa		32.95	■■■□□ 2.87
GGA2-215	ENST00000569189	PHKG2	P15735	406 aa		32.94	■■■□□ 2.86
GGA2-215	ENST00000569189	SLC27A3	Q5K4L6	730 aa		32.94	■■■□□ 2.86
GGA2-215	ENST00000569189	IFNL2	Q8IZJ0	200 aa		32.94	■■■□□ 2.86
GGA2-215	ENST00000569189	LRRC4B	Q9NT99	713 aa		32.94	■■■□□ 2.86
GGA2-215	ENST00000569189	KDR	P35968	1356 aa		32.94	■■■□□ 2.86
GGA2-215	ENST00000569189	SLC15A2	Q16348	729 aa		32.93	■■■□□ 2.86
GGA2-215	ENST00000569189	SULT6B1	Q6IMI4	303 aa		32.93	■■■□□ 2.86
GGA2-215	ENST00000569189	MPRIP	Q6WCQ1	1025 aa		32.91	■■■□□ 2.86
GGA2-215	ENST00000569189	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.9	■■■□□ 2.86
GGA2-215	ENST00000569189	COL3A1	P02461	1466 aa	Predicted RBP	32.9	■■■□□ 2.86
GGA2-215	ENST00000569189	DIAPH1	O60610	1272 aa	Known RBP	32.88	■■■□□ 2.85
GGA2-215	ENST00000569189	AMOT	Q4VCS5	1084 aa		32.88	■■■□□ 2.85
GGA2-215	ENST00000569189	QSER1	Q2KHR3	1735 aa		32.86	■■■□□ 2.85
GGA2-215	ENST00000569189	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.85	■■■□□ 2.85
GGA2-215	ENST00000569189	CCNL1	Q9UK58	526 aa	Predicted RBP	32.85	■■■□□ 2.85
GGA2-215	ENST00000569189	TUBGCP6	Q96RT7	1819 aa		32.85	■■■□□ 2.85
GGA2-215	ENST00000569189	PALLD	Q8WX93	1383 aa		32.84	■■■□□ 2.85
GGA2-215	ENST00000569189	KCNQ4	P56696	695 aa		32.84	■■■□□ 2.85
GGA2-215	ENST00000569189	ZNF827	Q17R98	1081 aa		32.84	■■■□□ 2.85
GGA2-215	ENST00000569189	PIGB	Q92521	554 aa		32.84	■■■□□ 2.85
GGA2-215	ENST00000569189	PDGFD	Q9GZP0	370 aa	Predicted RBP	32.84	■■■□□ 2.85
GGA2-215	ENST00000569189	C5	P01031	1676 aa		32.84	■■■□□ 2.85
GGA2-215	ENST00000569189	TAF1L	Q8IZX4	1826 aa		32.83	■■■□□ 2.85
GGA2-215	ENST00000569189	HSP90AB1	P08238	724 aa	Known RBP	32.82	■■■□□ 2.84
GGA2-215	ENST00000569189	SPON1	Q9HCB6	807 aa		32.82	■■■□□ 2.84
GGA2-215	ENST00000569189	TMOD3	Q9NYL9	352 aa		32.82	■■■□□ 2.84
GGA2-215	ENST00000569189	HMOX1	P09601	288 aa		32.81	■■■□□ 2.84
GGA2-215	ENST00000569189	SMARCC1	Q92922	1105 aa	Predicted RBP	32.81	■■■□□ 2.84
GGA2-215	ENST00000569189	AKT1S1	Q96B36	256 aa		32.81	■■■□□ 2.84
GGA2-215	ENST00000569189	C1orf141	Q5JVX7	400 aa		32.79	■■■□□ 2.84
GGA2-215	ENST00000569189	DCAF5	Q96JK2	942 aa		32.79	■■■□□ 2.84
GGA2-215	ENST00000569189	KDM6A	O15550	1401 aa	Predicted RBP	32.78	■■■□□ 2.84
GGA2-215	ENST00000569189	SCN11A	Q9UI33	1791 aa		32.77	■■■□□ 2.84
GGA2-215	ENST00000569189	VIRMA	Q69YN4	1812 aa	Known RBP	32.77	■■■□□ 2.84
GGA2-215	ENST00000569189	ERVV-2	B6SEH9	535 aa		32.76	■■■□□ 2.83
GGA2-215	ENST00000569189	PPP2R1A	P30153	589 aa		32.76	■■■□□ 2.83
GGA2-215	ENST00000569189	CFAP53	Q96M91	514 aa		32.76	■■■□□ 2.83
GGA2-215	ENST00000569189	ZBTB7A	O95365	584 aa		32.75	■■■□□ 2.83
GGA2-215	ENST00000569189	U2SURP	O15042	1029 aa	Known RBP	32.74	■■■□□ 2.83
GGA2-215	ENST00000569189	TFCP2L1	Q9NZI6	479 aa		32.72	■■■□□ 2.83
GGA2-215	ENST00000569189	HMGB2	P26583	209 aa	Known RBP	32.71	■■■□□ 2.83
GGA2-215	ENST00000569189	ASAP1	Q9ULH1	1129 aa		32.71	■■■□□ 2.83
GGA2-215	ENST00000569189	C4B	P0C0L5	1744 aa		32.71	■■■□□ 2.83
GGA2-215	ENST00000569189	PNPLA7	Q6ZV29	1317 aa		32.7	■■■□□ 2.82
GGA2-215	ENST00000569189	AKAP4	Q5JQC9	854 aa		32.69	■■■□□ 2.82
GGA2-215	ENST00000569189	MTFR1L	Q9H019	292 aa		32.69	■■■□□ 2.82
GGA2-215	ENST00000569189	PPP1R1B	Q9UD71	204 aa	Predicted RBP	32.69	■■■□□ 2.82
GGA2-215	ENST00000569189	CABP4	P57796	275 aa		32.68	■■■□□ 2.82
GGA2-215	ENST00000569189	ATG3	Q9NT62	314 aa		32.68	■■■□□ 2.82
GGA2-215	ENST00000569189	ATF5	Q9Y2D1	282 aa	Predicted RBP	32.68	■■■□□ 2.82
GGA2-215	ENST00000569189	LOC102724428	A0A0B4J2F2	783 aa		32.67	■■■□□ 2.82
GGA2-215	ENST00000569189	SIK1	P57059	783 aa		32.67	■■■□□ 2.82
GGA2-215	ENST00000569189	ZEB1	P37275	1124 aa	Predicted RBP	32.65	■■■□□ 2.82
GGA2-215	ENST00000569189	MTHFSD	Q2M296	383 aa	Known RBP	32.65	■■■□□ 2.82
GGA2-215	ENST00000569189	NUDC	Q9Y266	331 aa		32.65	■■■□□ 2.82
GGA2-215	ENST00000569189	ZNF831	Q5JPB2	1677 aa		32.65	■■■□□ 2.82
GGA2-215	ENST00000569189	PTGER2	P43116	358 aa		32.64	■■■□□ 2.82

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