RNA–Protein interactions for RNA: ENST00000568799.1

GGA2-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 1,403 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-212ENST00000568799 RGPD2P0DJD1 1756 aa28.93■■■□□ 2.22
GGA2-212ENST00000568799 NHSQ6T4R5 1651 aa28.93■■■□□ 2.22
GGA2-212ENST00000568799 POLKQ9UBT6 870 aa28.92■■■□□ 2.22
GGA2-212ENST00000568799 TXNRD1Q16881 649 aa28.91■■■□□ 2.22
GGA2-212ENST00000568799 KIF7Q2M1P5 1343 aa28.9■■■□□ 2.22
GGA2-212ENST00000568799 MORC1Q86VD1 984 aa28.89■■■□□ 2.22
GGA2-212ENST00000568799 SYTL4Q96C24 671 aaPredicted RBP28.89■■■□□ 2.22
GGA2-212ENST00000568799 KAT6BQ8WYB5 2073 aa28.89■■■□□ 2.22
GGA2-212ENST00000568799 ANKRD26Q9UPS8 1709 aa28.89■■■□□ 2.21
GGA2-212ENST00000568799 LRP5O75197 1615 aa28.88■■■□□ 2.21
GGA2-212ENST00000568799 PROM2Q8N271 834 aa28.87■■■□□ 2.21
GGA2-212ENST00000568799 MAP2P11137 1827 aaKnown RBP28.86■■■□□ 2.21
GGA2-212ENST00000568799 PCDH11XQ9BZA7 1347 aa28.85■■■□□ 2.21
GGA2-212ENST00000568799 PCDH11YQ9BZA8 1340 aa28.85■■■□□ 2.21
GGA2-212ENST00000568799 STK32BQ9NY57 414 aa28.85■■■□□ 2.21
GGA2-212ENST00000568799 PRIM1P49642 420 aaKnown RBP28.83■■■□□ 2.21
GGA2-212ENST00000568799 ANO8Q9HCE9 1232 aaPredicted RBP28.82■■■□□ 2.2
GGA2-212ENST00000568799 EYA1Q99502 592 aa28.81■■■□□ 2.2
GGA2-212ENST00000568799 BTAF1O14981 1849 aa28.8■■■□□ 2.2
GGA2-212ENST00000568799 EIF4A2Q14240 407 aaKnown RBP28.79■■■□□ 2.2
GGA2-212ENST00000568799 SPG7Q9UQ90 795 aa28.78■■■□□ 2.2
GGA2-212ENST00000568799 SHANK3Q9BYB0 1731 aa28.77■■■□□ 2.2
GGA2-212ENST00000568799 SLC15A2Q16348 729 aa28.77■■■□□ 2.2
GGA2-212ENST00000568799 NCAPD2Q15021 1401 aa28.76■■■□□ 2.2
GGA2-212ENST00000568799 DOT1LQ8TEK3 1739 aa28.76■■■□□ 2.19
GGA2-212ENST00000568799 SLC27A3Q5K4L6 730 aa28.76■■■□□ 2.19
GGA2-212ENST00000568799 SPON1Q9HCB6 807 aa28.76■■■□□ 2.19
GGA2-212ENST00000568799 AMER1Q5JTC6 1135 aaPredicted RBP28.75■■■□□ 2.19
GGA2-212ENST00000568799 CYP27B1O15528 508 aa28.72■■■□□ 2.19
GGA2-212ENST00000568799 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.72■■■□□ 2.191e-7■■■□□ 14.6
GGA2-212ENST00000568799 PPP1R1BQ9UD71 204 aaPredicted RBP28.71■■■□□ 2.19
GGA2-212ENST00000568799 IGSF1Q8N6C5 1336 aa28.69■■■□□ 2.18
GGA2-212ENST00000568799 LRRC4BQ9NT99 713 aa28.69■■■□□ 2.18
GGA2-212ENST00000568799 PKD1L3Q7Z443 1732 aa28.68■■■□□ 2.18
GGA2-212ENST00000568799 CC2D1BQ5T0F9 858 aaKnown RBP28.68■■■□□ 2.18
GGA2-212ENST00000568799 MPRIPQ6WCQ1 1025 aa28.68■■■□□ 2.18
GGA2-212ENST00000568799 PER1O15534 1290 aaPredicted RBP28.67■■■□□ 2.18
GGA2-212ENST00000568799 PLEKHG2Q9H7P9 1386 aa28.66■■■□□ 2.18
GGA2-212ENST00000568799 IFNL2Q8IZJ0 200 aa28.66■■■□□ 2.18
GGA2-212ENST00000568799 CCNL1Q9UK58 526 aaPredicted RBP28.66■■■□□ 2.18
GGA2-212ENST00000568799 ZBTB7AO95365 584 aa28.65■■■□□ 2.18
GGA2-212ENST00000568799 ZEB1P37275 1124 aaPredicted RBP28.65■■■□□ 2.18
GGA2-212ENST00000568799 HMGB2P26583 209 aaKnown RBP28.64■■■□□ 2.18
GGA2-212ENST00000568799 NKX1-1Q15270 411 aaPredicted RBP28.64■■■□□ 2.18
GGA2-212ENST00000568799 PDGFDQ9GZP0 370 aaPredicted RBP28.64■■■□□ 2.18
GGA2-212ENST00000568799 PAPPAQ13219 1627 aa28.63■■■□□ 2.17
GGA2-212ENST00000568799 PHKG2P15735 406 aa28.62■■■□□ 2.17
GGA2-212ENST00000568799 ZNF827Q17R98 1081 aa28.62■■■□□ 2.17
GGA2-212ENST00000568799 CASZ1Q86V15 1759 aa28.62■■■□□ 2.17
GGA2-212ENST00000568799 CNGB1Q14028 1251 aaPredicted RBP28.61■■■□□ 2.17
GGA2-212ENST00000568799 PLEKHO1Q53GL0 409 aaPredicted RBP28.61■■■□□ 2.17
GGA2-212ENST00000568799 SMARCC1Q92922 1105 aaPredicted RBP28.61■■■□□ 2.17
GGA2-212ENST00000568799 MTHFSP49914 203 aa28.6■■■□□ 2.17
GGA2-212ENST00000568799 KCNQ4P56696 695 aa28.6■■■□□ 2.17
GGA2-212ENST00000568799 TFCP2L1Q9NZI6 479 aa28.6■■■□□ 2.17
GGA2-212ENST00000568799 AMOTQ4VCS5 1084 aa28.6■■■□□ 2.17
GGA2-212ENST00000568799 AKT1S1Q96B36 256 aa28.6■■■□□ 2.17
GGA2-212ENST00000568799 MTFR1LQ9H019 292 aa28.6■■■□□ 2.17
GGA2-212ENST00000568799 PALLDQ8WX93 1383 aa28.59■■■□□ 2.17
GGA2-212ENST00000568799 NPC1L1Q9UHC9 1359 aa28.59■■■□□ 2.17
GGA2-212ENST00000568799 SULT6B1Q6IMI4 303 aa28.59■■■□□ 2.17
GGA2-212ENST00000568799 TMOD3Q9NYL9 352 aa28.59■■■□□ 2.17
GGA2-212ENST00000568799 ATF5Q9Y2D1 282 aaPredicted RBP28.59■■■□□ 2.17
GGA2-212ENST00000568799 HSP90AB1P08238 724 aaKnown RBP28.58■■■□□ 2.17
GGA2-212ENST00000568799 IL13P35225 146 aa28.58■■■□□ 2.17
GGA2-212ENST00000568799 LY75O60449 1722 aa28.58■■■□□ 2.17
GGA2-212ENST00000568799 PIGBQ92521 554 aa28.56■■■□□ 2.16
GGA2-212ENST00000568799 ZNF530Q6P9A1 599 aaPredicted RBP28.55■■■□□ 2.16
GGA2-212ENST00000568799 AEBP1Q8IUX7 1158 aa28.55■■■□□ 2.16
GGA2-212ENST00000568799 TOGARAM1Q9Y4F4 1720 aa28.54■■■□□ 2.16
GGA2-212ENST00000568799 C1orf141Q5JVX7 400 aa28.53■■■□□ 2.16
GGA2-212ENST00000568799 DCAF5Q96JK2 942 aa28.52■■■□□ 2.16
GGA2-212ENST00000568799 DIAPH1O60610 1272 aaKnown RBP28.52■■■□□ 2.16
GGA2-212ENST00000568799 SLC16A10Q8TF71 515 aa28.52■■■□□ 2.16
GGA2-212ENST00000568799 ITGB4P16144 1822 aa28.51■■■□□ 2.15
GGA2-212ENST00000568799 KDRP35968 1356 aa28.51■■■□□ 2.15
GGA2-212ENST00000568799 PNPLA7Q6ZV29 1317 aa28.5■■■□□ 2.15
GGA2-212ENST00000568799 PTGER2P43116 358 aa28.5■■■□□ 2.15
GGA2-212ENST00000568799 ERVV-2B6SEH9 535 aa28.49■■■□□ 2.15
GGA2-212ENST00000568799 DCAF8L1A6NGE4 600 aa28.48■■■□□ 2.15
GGA2-212ENST00000568799 MSH5O43196 834 aa28.48■■■□□ 2.15
GGA2-212ENST00000568799 LOC102724428A0A0B4J2F2 783 aa28.45■■■□□ 2.15
GGA2-212ENST00000568799 HMOX1P09601 288 aa28.45■■■□□ 2.15
GGA2-212ENST00000568799 POLD1P28340 1107 aa28.45■■■□□ 2.15
GGA2-212ENST00000568799 SIK1P57059 783 aa28.45■■■□□ 2.15
GGA2-212ENST00000568799 CABP4P57796 275 aa28.45■■■□□ 2.15
GGA2-212ENST00000568799 ASAP1Q9ULH1 1129 aa28.45■■■□□ 2.15
GGA2-212ENST00000568799 QSER1Q2KHR3 1735 aa28.45■■■□□ 2.14
GGA2-212ENST00000568799 AK7Q96M32 723 aa28.44■■■□□ 2.14
GGA2-212ENST00000568799 FLAD1Q8NFF5 587 aa28.43■■■□□ 2.14
GGA2-212ENST00000568799 ARXQ96QS3 562 aa28.43■■■□□ 2.14
GGA2-212ENST00000568799 C5P01031 1676 aa28.43■■■□□ 2.14
GGA2-212ENST00000568799 CFAP53Q96M91 514 aa28.43■■■□□ 2.14
GGA2-212ENST00000568799 U2SURPO15042 1029 aaKnown RBP28.42■■■□□ 2.14
GGA2-212ENST00000568799 SGIP1Q9BQI5 828 aa28.42■■■□□ 2.14
GGA2-212ENST00000568799 ATG3Q9NT62 314 aa28.42■■■□□ 2.14
GGA2-212ENST00000568799 ATP6V1AP38606 617 aa28.41■■■□□ 2.14
GGA2-212ENST00000568799 AKAP4Q5JQC9 854 aa28.4■■■□□ 2.14
GGA2-212ENST00000568799 KDM6AO15550 1401 aaPredicted RBP28.4■■■□□ 2.14
GGA2-212ENST00000568799 COL23A1Q86Y22 540 aaPredicted RBP28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms