RNA–Protein interactions for RNA: ENST00000568509.2

SPG7-219, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-219ENST00000568509 SYTL4Q96C24 671 aaPredicted RBP20.81■□□□□ 0.92
SPG7-219ENST00000568509 NBPF6Q5VWK0 638 aa20.8■□□□□ 0.92
SPG7-219ENST00000568509 NBPF4Q96M43 638 aa20.8■□□□□ 0.92
SPG7-219ENST00000568509 PRIM1P49642 420 aaKnown RBP20.79■□□□□ 0.92
SPG7-219ENST00000568509 PTGER2P43116 358 aa20.78■□□□□ 0.92
SPG7-219ENST00000568509 CARD14Q9BXL6 1004 aa20.78■□□□□ 0.92
SPG7-219ENST00000568509 LRRC4BQ9NT99 713 aa20.78■□□□□ 0.92
SPG7-219ENST00000568509 FAM208AQ9UK61 1670 aaKnown RBP20.78■□□□□ 0.92
SPG7-219ENST00000568509 BTAF1O14981 1849 aa20.78■□□□□ 0.92
SPG7-219ENST00000568509 CASZ1Q86V15 1759 aa20.77■□□□□ 0.92
SPG7-219ENST00000568509 ATXN8OSP0DMR3 200 aa20.77■□□□□ 0.92
SPG7-219ENST00000568509 MTFR1LQ9H019 292 aa20.77■□□□□ 0.92
SPG7-219ENST00000568509 RTL1A6NKG5 1358 aa20.77■□□□□ 0.91
SPG7-219ENST00000568509 HSP90AB2PQ58FF8 381 aa20.76■□□□□ 0.91
SPG7-219ENST00000568509 SLC27A3Q5K4L6 730 aa20.76■□□□□ 0.91
SPG7-219ENST00000568509 USHBP1Q8N6Y0 703 aa20.76■□□□□ 0.91
SPG7-219ENST00000568509 RAPGEF4Q8WZA2 1011 aa20.76■□□□□ 0.91
SPG7-219ENST00000568509 RGPD2P0DJD1 1756 aa20.76■□□□□ 0.91
SPG7-219ENST00000568509 CLSPNQ9HAW4 1339 aa20.75■□□□□ 0.91
SPG7-219ENST00000568509 YY1P25490 414 aa20.74■□□□□ 0.91
SPG7-219ENST00000568509 SMG6Q86US8 1419 aaKnown RBP20.74■□□□□ 0.91
SPG7-219ENST00000568509 CGNL1Q0VF96 1302 aa20.74■□□□□ 0.91
SPG7-219ENST00000568509 TATP17735 454 aaPredicted RBP20.73■□□□□ 0.91
SPG7-219ENST00000568509 ZNF827Q17R98 1081 aa20.72■□□□□ 0.91
SPG7-219ENST00000568509 INSRP06213 1382 aa20.72■□□□□ 0.91
SPG7-219ENST00000568509 PPM1GO15355 546 aaPredicted RBP20.72■□□□□ 0.91
SPG7-219ENST00000568509 KCNQ4P56696 695 aa20.72■□□□□ 0.91
SPG7-219ENST00000568509 POLR3GLQ9BT43 218 aa20.72■□□□□ 0.91
SPG7-219ENST00000568509 MEGF6O75095 1541 aa20.71■□□□□ 0.91
SPG7-219ENST00000568509 AKT1S1Q96B36 256 aa20.71■□□□□ 0.91
SPG7-219ENST00000568509 SYT17Q9BSW7 474 aa20.71■□□□□ 0.91
SPG7-219ENST00000568509 FHDC1Q9C0D6 1143 aaPredicted RBP20.7■□□□□ 0.9
SPG7-219ENST00000568509 TFCP2L1Q9NZI6 479 aa20.7■□□□□ 0.9
SPG7-219ENST00000568509 EMILIN1Q9Y6C2 1016 aa20.7■□□□□ 0.9
SPG7-219ENST00000568509 FLT4P35916 1363 aa20.7■□□□□ 0.9
SPG7-219ENST00000568509 NSD3Q9BZ95 1437 aa20.69■□□□□ 0.9
SPG7-219ENST00000568509 KIF24Q5T7B8 1368 aa20.69■□□□□ 0.9
SPG7-219ENST00000568509 ARXQ96QS3 562 aa20.69■□□□□ 0.9
SPG7-219ENST00000568509 SGIP1Q9BQI5 828 aa20.69■□□□□ 0.9
SPG7-219ENST00000568509 KIF20BQ96Q89 1820 aa20.68■□□□□ 0.9
SPG7-219ENST00000568509 SLC16A10Q8TF71 515 aa20.67■□□□□ 0.9
SPG7-219ENST00000568509 CCNL1Q9UK58 526 aaPredicted RBP20.67■□□□□ 0.9
SPG7-219ENST00000568509 PAPPAQ13219 1627 aa20.66■□□□□ 0.9
SPG7-219ENST00000568509 MYOM1P52179 1685 aa20.65■□□□□ 0.9
SPG7-219ENST00000568509 PCDH11XQ9BZA7 1347 aa20.65■□□□□ 0.9
SPG7-219ENST00000568509 PCDH11YQ9BZA8 1340 aa20.65■□□□□ 0.9
SPG7-219ENST00000568509 NSD2O96028 1365 aa20.64■□□□□ 0.9
SPG7-219ENST00000568509 EIF4G2P78344 907 aaKnown RBP eCLIP20.64■□□□□ 0.89
SPG7-219ENST00000568509 DOT1LQ8TEK3 1739 aa20.64■□□□□ 0.89
SPG7-219ENST00000568509 SHANK3Q9BYB0 1731 aa20.64■□□□□ 0.89
SPG7-219ENST00000568509 MPRIPQ6WCQ1 1025 aa20.63■□□□□ 0.89
SPG7-219ENST00000568509 CCER1Q8TC90 406 aaPredicted RBP20.63■□□□□ 0.89
SPG7-219ENST00000568509 WASHC2AQ641Q2 1341 aa20.63■□□□□ 0.89
SPG7-219ENST00000568509 PNPLA7Q6ZV29 1317 aa20.63■□□□□ 0.89
SPG7-219ENST00000568509 POLD1P28340 1107 aa20.62■□□□□ 0.89
SPG7-219ENST00000568509 CYP27B1O15528 508 aa20.61■□□□□ 0.89
SPG7-219ENST00000568509 POLKQ9UBT6 870 aa20.61■□□□□ 0.89
SPG7-219ENST00000568509 MAP2P11137 1827 aaKnown RBP20.61■□□□□ 0.89
SPG7-219ENST00000568509 HSPA5P11021 654 aaKnown RBP20.6■□□□□ 0.89
SPG7-219ENST00000568509 HMGB2P26583 209 aaKnown RBP20.6■□□□□ 0.89
SPG7-219ENST00000568509 TNNT2P45379 298 aaPredicted RBP20.6■□□□□ 0.89
SPG7-219ENST00000568509 SPG7Q9UQ90 795 aa20.6■□□□□ 0.89
SPG7-219ENST00000568509 KLHL34Q8N239 644 aa20.59■□□□□ 0.89
SPG7-219ENST00000568509 EYA1Q99502 592 aa20.59■□□□□ 0.89
SPG7-219ENST00000568509 LY75O60449 1722 aa20.59■□□□□ 0.89
SPG7-219ENST00000568509 PANK3Q9H999 370 aa20.58■□□□□ 0.88
SPG7-219ENST00000568509 COL23A1Q86Y22 540 aaPredicted RBP20.57■□□□□ 0.88
SPG7-219ENST00000568509 SMARCC1Q92922 1105 aaPredicted RBP20.57■□□□□ 0.88
SPG7-219ENST00000568509 NKX1-1Q15270 411 aaPredicted RBP20.55■□□□□ 0.88
SPG7-219ENST00000568509 GPR162Q16538 588 aa20.55■□□□□ 0.88
SPG7-219ENST00000568509 PIGBQ92521 554 aa20.55■□□□□ 0.88
SPG7-219ENST00000568509 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.55■□□□□ 0.88
SPG7-219ENST00000568509 QSER1Q2KHR3 1735 aa20.55■□□□□ 0.88
SPG7-219ENST00000568509 PALLDQ8WX93 1383 aa20.54■□□□□ 0.88
SPG7-219ENST00000568509 MAP3K5Q99683 1374 aa20.53■□□□□ 0.88
SPG7-219ENST00000568509 EIF4A2Q14240 407 aaKnown RBP20.53■□□□□ 0.88
SPG7-219ENST00000568509 IFNL2Q8IZJ0 200 aa20.52■□□□□ 0.88
SPG7-219ENST00000568509 FLAD1Q8NFF5 587 aa20.52■□□□□ 0.88
SPG7-219ENST00000568509 TUBGCP6Q96RT7 1819 aa20.51■□□□□ 0.87
SPG7-219ENST00000568509 PELP1Q8IZL8 1130 aaKnown RBP20.5■□□□□ 0.87
SPG7-219ENST00000568509 TMOD3Q9NYL9 352 aa20.5■□□□□ 0.87
SPG7-219ENST00000568509 NCAPD2Q15021 1401 aa20.5■□□□□ 0.87
SPG7-219ENST00000568509 ITGB4P16144 1822 aa20.5■□□□□ 0.87
SPG7-219ENST00000568509 PHKG2P15735 406 aa20.49■□□□□ 0.87
SPG7-219ENST00000568509 MSL1Q68DK7 614 aa20.49■□□□□ 0.87
SPG7-219ENST00000568509 MORC1Q86VD1 984 aa20.48■□□□□ 0.87
SPG7-219ENST00000568509 AK7Q96M32 723 aa20.48■□□□□ 0.87
SPG7-219ENST00000568509 PKD1L3Q7Z443 1732 aa20.48■□□□□ 0.87
SPG7-219ENST00000568509 ANKRD26Q9UPS8 1709 aa20.48■□□□□ 0.87
SPG7-219ENST00000568509 LOC102724428A0A0B4J2F2 783 aa20.46■□□□□ 0.87
SPG7-219ENST00000568509 SIK1P57059 783 aa20.46■□□□□ 0.87
SPG7-219ENST00000568509 ZNF784Q8NCA9 323 aaPredicted RBP20.46■□□□□ 0.87
SPG7-219ENST00000568509 NLGN2Q8NFZ4 835 aa20.46■□□□□ 0.87
SPG7-219ENST00000568509 ASAP1Q9ULH1 1129 aa20.46■□□□□ 0.87
SPG7-219ENST00000568509 KNSTRNQ9Y448 316 aa20.46■□□□□ 0.87
SPG7-219ENST00000568509 COL24A1Q17RW2 1714 aa20.46■□□□□ 0.87
SPG7-219ENST00000568509 C5P01031 1676 aa20.46■□□□□ 0.87
SPG7-219ENST00000568509 CHD4Q14839 1912 aa20.45■□□□□ 0.86
SPG7-219ENST00000568509 PLEKHO1Q53GL0 409 aaPredicted RBP20.45■□□□□ 0.86
SPG7-219ENST00000568509 TAF1LQ8IZX4 1826 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms